RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 RPL19P84098 196 aaKnown RBP15.9■□□□□ 0.14
TDP1-206ENST00000553569 H3BNG1 76 aa15.89■□□□□ 0.13
TDP1-206ENST00000553569 TOR2AQ5JU69 321 aa15.89■□□□□ 0.13
TDP1-206ENST00000553569 PCNPQ8WW12 178 aaKnown RBP15.89■□□□□ 0.13
TDP1-206ENST00000553569 IL36BQ9NZH7 164 aa15.89■□□□□ 0.13
TDP1-206ENST00000553569 PRO0255Q9UI72 69 aa15.89■□□□□ 0.13
TDP1-206ENST00000553569 HHLA3Q9XRX5 114 aa15.89■□□□□ 0.13
TDP1-206ENST00000553569 NACAE9PAV3 2078 aa15.89■□□□□ 0.13
TDP1-206ENST00000553569 IGLV2-8P01709 118 aa15.88■□□□□ 0.13
TDP1-206ENST00000553569 ARMS2P0C7Q2 107 aa15.88■□□□□ 0.13
TDP1-206ENST00000553569 CRYBA4P53673 196 aa15.88■□□□□ 0.13
TDP1-206ENST00000553569 TEX261Q6UWH6 196 aa15.88■□□□□ 0.13
TDP1-206ENST00000553569 VPS13DQ5THJ4 4388 aa15.88■□□□□ 0.13
TDP1-206ENST00000553569 TRBV20OR9-2A0A075B6H5 130 aa15.87■□□□□ 0.13
TDP1-206ENST00000553569 SLAQ13239 276 aa15.87■□□□□ 0.13
TDP1-206ENST00000553569 RNF212Q495C1 297 aa15.87■□□□□ 0.13
TDP1-206ENST00000553569 DNLZQ5SXM8 178 aa15.87■□□□□ 0.13
TDP1-206ENST00000553569 A0A096LPF7 62 aa15.86■□□□□ 0.13
TDP1-206ENST00000553569 RS1O15537 224 aa15.86■□□□□ 0.13
TDP1-206ENST00000553569 CCL18P55774 89 aa15.86■□□□□ 0.13
TDP1-206ENST00000553569 CFAP126Q5VTH2 177 aa15.86■□□□□ 0.13
TDP1-206ENST00000553569 ZNF575Q86XF7 245 aa15.86■□□□□ 0.13
TDP1-206ENST00000553569 PTH2Q96A98 100 aa15.86■□□□□ 0.13
TDP1-206ENST00000553569 EIF5A2Q9GZV4 153 aaKnown RBP15.86■□□□□ 0.13
TDP1-206ENST00000553569 IGHV3-73A0A0B4J1V6 119 aa15.85■□□□□ 0.13
TDP1-206ENST00000553569 CEBPGP53567 150 aa15.85■□□□□ 0.13
TDP1-206ENST00000553569 SMIM12Q96EX1 92 aa15.85■□□□□ 0.13
TDP1-206ENST00000553569 PHLDA3Q9Y5J5 127 aa15.85■□□□□ 0.13
TDP1-206ENST00000553569 ICOSQ9Y6W8 199 aa15.85■□□□□ 0.13
TDP1-206ENST00000553569 SYT8Q8NBV8 401 aa15.84■□□□□ 0.13
TDP1-206ENST00000553569 DAZAP1Q96EP5 407 aaKnown RBP15.84■□□□□ 0.13
TDP1-206ENST00000553569 FAM210AQ96ND0 272 aa15.84■□□□□ 0.13
TDP1-206ENST00000553569 PARLQ9H300 379 aa15.84■□□□□ 0.13
TDP1-206ENST00000553569 LINC00588Q9Y4M8 146 aa15.84■□□□□ 0.13
TDP1-206ENST00000553569 KMT2AQ03164 3969 aa15.84■□□□□ 0.13
TDP1-206ENST00000553569 IGLV2-18A0A075B6J9 118 aa15.83■□□□□ 0.12
TDP1-206ENST00000553569 TMEM250H0YL14 139 aa15.83■□□□□ 0.12
TDP1-206ENST00000553569 M0R381 172 aa15.82■□□□□ 0.12
TDP1-206ENST00000553569 GATA1P15976 413 aaPredicted RBP15.82■□□□□ 0.12
TDP1-206ENST00000553569 DMRTA1Q5VZB9 504 aa15.82■□□□□ 0.12
TDP1-206ENST00000553569 JPT2Q9H910 190 aa15.82■□□□□ 0.12
TDP1-206ENST00000553569 SCRT2Q9NQ03 307 aa15.82■□□□□ 0.12
TDP1-206ENST00000553569 A8MWV9 139 aa15.81■□□□□ 0.12
TDP1-206ENST00000553569 CXCL1P09341 107 aa15.81■□□□□ 0.12
TDP1-206ENST00000553569 GYPEP15421 78 aa15.81■□□□□ 0.12
TDP1-206ENST00000553569 M0R2N4 97 aa15.8■□□□□ 0.12
TDP1-206ENST00000553569 MED14OSP0DP75 135 aa15.8■□□□□ 0.12
TDP1-206ENST00000553569 FAM3BP58499 235 aaPredicted RBP15.8■□□□□ 0.12
TDP1-206ENST00000553569 ESRGQ1W209 222 aa15.8■□□□□ 0.12
TDP1-206ENST00000553569 PIK3CD-AS1Q5SR53 167 aa15.8■□□□□ 0.12
TDP1-206ENST00000553569 ZFP82Q8N141 532 aa15.8■□□□□ 0.12
TDP1-206ENST00000553569 OR2D3Q8NGH3 330 aa15.8■□□□□ 0.12
TDP1-206ENST00000553569 BIN3Q9NQY0 253 aa15.8■□□□□ 0.12
TDP1-206ENST00000553569 LOC100131303A0A0U1RQF7 123 aa15.79■□□□□ 0.12
TDP1-206ENST00000553569 C19orf71A6NCJ1 209 aa15.79■□□□□ 0.12
TDP1-206ENST00000553569 K7EQD1 137 aa15.79■□□□□ 0.12
TDP1-206ENST00000553569 P01737 135 aa15.79■□□□□ 0.12
TDP1-206ENST00000553569 MRPL23Q16540 153 aaKnown RBP15.79■□□□□ 0.12
TDP1-206ENST00000553569 DNAH6Q9C0G6 4158 aa15.79■□□□□ 0.12
TDP1-206ENST00000553569 CIDEAO60543 219 aa15.78■□□□□ 0.12
TDP1-206ENST00000553569 GZMBP10144 247 aa15.78■□□□□ 0.12
TDP1-206ENST00000553569 SRIP30626 198 aa15.78■□□□□ 0.12
TDP1-206ENST00000553569 SAMD10Q9BYL1 202 aa15.78■□□□□ 0.12
TDP1-206ENST00000553569 MUC21A0A0G2JKD1 596 aa15.77■□□□□ 0.12
TDP1-206ENST00000553569 MUC21A0A140T8X8 626 aa15.77■□□□□ 0.12
TDP1-206ENST00000553569 K7EN84 100 aa15.77■□□□□ 0.12
TDP1-206ENST00000553569 FAM74A4Q5TZK3 123 aa15.77■□□□□ 0.12
TDP1-206ENST00000553569 SLC25A29Q8N8R3 303 aa15.77■□□□□ 0.12
TDP1-206ENST00000553569 OR10AG1Q8NH19 301 aa15.77■□□□□ 0.12
TDP1-206ENST00000553569 ZNRF2Q8NHG8 242 aa15.77■□□□□ 0.12
TDP1-206ENST00000553569 OCC1Q8TAD7 63 aa15.77■□□□□ 0.12
TDP1-206ENST00000553569 SNAI2O43623 268 aa15.76■□□□□ 0.11
TDP1-206ENST00000553569 SRP19P09132 144 aaKnown RBP15.76■□□□□ 0.11
TDP1-206ENST00000553569 RPS20P60866 119 aaKnown RBP15.76■□□□□ 0.11
TDP1-206ENST00000553569 TPPP3Q9BW30 176 aa15.76■□□□□ 0.11
TDP1-206ENST00000553569 A0A087WWL8 130 aa15.75■□□□□ 0.11
TDP1-206ENST00000553569 SSTP61278 116 aa15.75■□□□□ 0.11
TDP1-206ENST00000553569 RHOHQ15669 191 aa15.75■□□□□ 0.11
TDP1-206ENST00000553569 ZFP2Q6ZN57 461 aa15.75■□□□□ 0.11
TDP1-206ENST00000553569 NEGR1Q7Z3B1 354 aa15.75■□□□□ 0.11
TDP1-206ENST00000553569 SFRP2Q96HF1 295 aa15.75■□□□□ 0.11
TDP1-206ENST00000553569 SMIM7Q9BQ49 75 aa15.75■□□□□ 0.11
TDP1-206ENST00000553569 PRADC1Q9BSG0 188 aa15.75■□□□□ 0.11
TDP1-206ENST00000553569 MRPS16Q9Y3D3 137 aaKnown RBP15.75■□□□□ 0.11
TDP1-206ENST00000553569 NDUFS6O75380 124 aaKnown RBP15.74■□□□□ 0.11
TDP1-206ENST00000553569 OR5AL1P0C617 328 aa15.74■□□□□ 0.11
TDP1-206ENST00000553569 SPANXN1Q5VSR9 72 aa15.74■□□□□ 0.11
TDP1-206ENST00000553569 Q6ZSN1 163 aa15.74■□□□□ 0.11
TDP1-206ENST00000553569 NUDT10Q8NFP7 164 aa15.74■□□□□ 0.11
TDP1-206ENST00000553569 NUDT11Q96G61 164 aa15.74■□□□□ 0.11
TDP1-206ENST00000553569 RNASE7Q9H1E1 156 aaKnown RBP15.74■□□□□ 0.11
TDP1-206ENST00000553569 TRBV6-4A0A1B0GX49 114 aa15.73■□□□□ 0.11
TDP1-206ENST00000553569 XKRY2A2RUG3 117 aa15.73■□□□□ 0.11
TDP1-206ENST00000553569 RHODO00212 210 aa15.73■□□□□ 0.11
TDP1-206ENST00000553569 NXPH4O95158 308 aa15.73■□□□□ 0.11
TDP1-206ENST00000553569 UFSP1Q6NVU6 142 aa15.73■□□□□ 0.11
TDP1-206ENST00000553569 FER1L6-AS1Q8NA97 138 aa15.73■□□□□ 0.11
TDP1-206ENST00000553569 SSBP4Q9BWG4 385 aaPredicted RBP15.73■□□□□ 0.11
TDP1-206ENST00000553569 ZNF727A8MUV8 499 aa15.72■□□□□ 0.11
TDP1-206ENST00000553569 IGLC6P0CF74 106 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms