RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 KPNA3O00505 521 aaPredicted RBP0.18□□□□□ -2.38
CCDC38-206ENST00000548771 RPP14O95059 124 aaKnown RBP0.18□□□□□ -2.38
CCDC38-206ENST00000548771 LYPLA2O95372 231 aa0.18□□□□□ -2.38
CCDC38-206ENST00000548771 RPS17P08708 135 aaKnown RBP0.18□□□□□ -2.38
CCDC38-206ENST00000548771 SRIP30626 198 aa0.18□□□□□ -2.38
CCDC38-206ENST00000548771 KRR1Q13601 381 aaKnown RBP0.18□□□□□ -2.38
CCDC38-206ENST00000548771 ESPL1Q14674 2120 aa0.18□□□□□ -2.38
CCDC38-206ENST00000548771 PTRHD1Q6GMV3 140 aaKnown RBP0.18□□□□□ -2.38
CCDC38-206ENST00000548771 C4orf22Q6V702 233 aa0.18□□□□□ -2.38
CCDC38-206ENST00000548771 PDZD9Q8IXQ8 264 aa0.18□□□□□ -2.38
CCDC38-206ENST00000548771 PSMF1Q92530 271 aa0.18□□□□□ -2.38
CCDC38-206ENST00000548771 PRRT1Q99946 306 aa0.18□□□□□ -2.38
CCDC38-206ENST00000548771 LINC00467Q9BRT7 94 aa0.18□□□□□ -2.38
CCDC38-206ENST00000548771 KRTAP2-1Q9BYU5 128 aa0.18□□□□□ -2.38
CCDC38-206ENST00000548771 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.18□□□□□ -2.38
CCDC38-206ENST00000548771 MED29Q9NX70 200 aa0.18□□□□□ -2.38
CCDC38-206ENST00000548771 IDI2-AS1Q9NZ38 188 aa0.18□□□□□ -2.38
CCDC38-206ENST00000548771 GLTPQ9NZD2 209 aa0.18□□□□□ -2.38
CCDC38-206ENST00000548771 PRELID3BQ9Y3B1 194 aa0.18□□□□□ -2.38
CCDC38-206ENST00000548771 CADP27708 2225 aa0.18□□□□□ -2.38
CCDC38-206ENST00000548771 RTL1A6NKG5 1358 aa0.18□□□□□ -2.38
CCDC38-206ENST00000548771 IBTKQ9P2D0 1353 aaPredicted RBP0.18□□□□□ -2.38
CCDC38-206ENST00000548771 KIAA1549LQ6ZVL6 1849 aa0.17□□□□□ -2.38
CCDC38-206ENST00000548771 ANKRD36CQ5JPF3 1778 aa0.17□□□□□ -2.38
CCDC38-206ENST00000548771 TRAV10A0A0B4J240 114 aa0.17□□□□□ -2.38
CCDC38-206ENST00000548771 A0A0D9SG42 100 aa0.17□□□□□ -2.38
CCDC38-206ENST00000548771 SMIM9A6NGZ8 99 aa0.17□□□□□ -2.38
CCDC38-206ENST00000548771 A8MWV9 139 aa0.17□□□□□ -2.38
CCDC38-206ENST00000548771 HLA-EP13747 358 aa0.17□□□□□ -2.38
CCDC38-206ENST00000548771 KDELR1P24390 212 aa0.17□□□□□ -2.38
CCDC38-206ENST00000548771 HOXA6P31267 233 aa0.17□□□□□ -2.38
CCDC38-206ENST00000548771 RNASE4P34096 147 aaKnown RBP0.17□□□□□ -2.38
CCDC38-206ENST00000548771 CEBPGP53567 150 aa0.17□□□□□ -2.38
CCDC38-206ENST00000548771 AESQ08117 197 aa0.17□□□□□ -2.38
CCDC38-206ENST00000548771 EDDM3AQ14507 147 aa0.17□□□□□ -2.38
CCDC38-206ENST00000548771 MYOM3Q5VTT5 1437 aa0.17□□□□□ -2.38
CCDC38-206ENST00000548771 OR51A2Q8NGJ7 313 aa0.17□□□□□ -2.38
CCDC38-206ENST00000548771 ZNF431Q8TF32 576 aaPredicted RBP0.17□□□□□ -2.38
CCDC38-206ENST00000548771 CANT1Q8WVQ1 401 aa0.17□□□□□ -2.38
CCDC38-206ENST00000548771 PARD6GQ9BYG4 376 aaPredicted RBP0.17□□□□□ -2.38
CCDC38-206ENST00000548771 TMEM133Q9H2Q1 129 aa0.17□□□□□ -2.38
CCDC38-206ENST00000548771 RNF122Q9H9V4 155 aa0.17□□□□□ -2.38
CCDC38-206ENST00000548771 TMEM138Q9NPI0 162 aa0.17□□□□□ -2.38
CCDC38-206ENST00000548771 PCTPQ9UKL6 214 aa0.17□□□□□ -2.38
CCDC38-206ENST00000548771 LY96Q9Y6Y9 160 aa0.17□□□□□ -2.38
CCDC38-206ENST00000548771 PI4KAP42356 2102 aa0.17□□□□□ -2.38
CCDC38-206ENST00000548771 CITO14578 2027 aa0.16□□□□□ -2.38
CCDC38-206ENST00000548771 DOCK1Q14185 1865 aa0.16□□□□□ -2.38
CCDC38-206ENST00000548771 HEATR1Q9H583 2144 aaKnown RBP0.16□□□□□ -2.38
CCDC38-206ENST00000548771 MYH10P35580 1976 aa0.16□□□□□ -2.38
CCDC38-206ENST00000548771 A0A096LNT2 108 aa0.16□□□□□ -2.38
CCDC38-206ENST00000548771 PIN1P1O15428 100 aa0.16□□□□□ -2.38
CCDC38-206ENST00000548771 NDUFB3O43676 98 aa0.16□□□□□ -2.38
CCDC38-206ENST00000548771 MT1HL1P0DM35 61 aa0.16□□□□□ -2.38
CCDC38-206ENST00000548771 SPINK7P58062 85 aa0.16□□□□□ -2.38
CCDC38-206ENST00000548771 HIST1H3AP68431 136 aa0.16□□□□□ -2.38
CCDC38-206ENST00000548771 H3F3AP84243 136 aa0.16□□□□□ -2.38
CCDC38-206ENST00000548771 TFF3Q07654 80 aa0.16□□□□□ -2.38
CCDC38-206ENST00000548771 CIRBPQ14011 172 aaKnown RBP0.16□□□□□ -2.38
CCDC38-206ENST00000548771 KRTAP19-2Q3LHN2 52 aa0.16□□□□□ -2.38
CCDC38-206ENST00000548771 KRTAP19-6Q3LI70 58 aa0.16□□□□□ -2.38
CCDC38-206ENST00000548771 ZNF833PQ6ZTB9 187 aa0.16□□□□□ -2.38
CCDC38-206ENST00000548771 EXOC3-AS1Q8N2X6 119 aa0.16□□□□□ -2.38
CCDC38-206ENST00000548771 OR5D14Q8NGL3 314 aa0.16□□□□□ -2.38
CCDC38-206ENST00000548771 STAG3L4Q8TBR4 150 aa0.16□□□□□ -2.38
CCDC38-206ENST00000548771 YPEL2Q96QA6 119 aa0.16□□□□□ -2.38
CCDC38-206ENST00000548771 SLC25A21Q9BQT8 299 aaPredicted RBP0.16□□□□□ -2.38
CCDC38-206ENST00000548771 UCK1Q9HA47 277 aa0.16□□□□□ -2.38
CCDC38-206ENST00000548771 PLAC8Q9NZF1 115 aa0.16□□□□□ -2.38
CCDC38-206ENST00000548771 U3KQA8 63 aa0.16□□□□□ -2.38
CCDC38-206ENST00000548771 KTN1Q86UP2 1357 aaKnown RBP0.16□□□□□ -2.38
CCDC38-206ENST00000548771 KIF20BQ96Q89 1820 aa0.15□□□□□ -2.38
CCDC38-206ENST00000548771 SPEF2Q9C093 1822 aa0.15□□□□□ -2.38
CCDC38-206ENST00000548771 K7EIL1 84 aa0.15□□□□□ -2.39
CCDC38-206ENST00000548771 ERC2-IT1O76042 136 aa0.15□□□□□ -2.39
CCDC38-206ENST00000548771 ERP29P30040 261 aaKnown RBP0.15□□□□□ -2.39
CCDC38-206ENST00000548771 DSCR4P56555 118 aaPredicted RBP0.15□□□□□ -2.39
CCDC38-206ENST00000548771 MYL5Q02045 173 aa0.15□□□□□ -2.39
CCDC38-206ENST00000548771 MYO7BQ6PIF6 2116 aa0.15□□□□□ -2.39
CCDC38-206ENST00000548771 GRINAQ7Z429 371 aa0.15□□□□□ -2.39
CCDC38-206ENST00000548771 OR10K1Q8NGX5 313 aa0.15□□□□□ -2.39
CCDC38-206ENST00000548771 OR10AC1Q8NH08 325 aa0.15□□□□□ -2.39
CCDC38-206ENST00000548771 TCEAL4Q96EI5 215 aa0.15□□□□□ -2.39
CCDC38-206ENST00000548771 TMEM126AQ9H061 195 aa0.15□□□□□ -2.39
CCDC38-206ENST00000548771 LRTM1Q9HBL6 345 aa0.15□□□□□ -2.39
CCDC38-206ENST00000548771 SCN8AQ9UQD0 1980 aa0.15□□□□□ -2.39
CCDC38-206ENST00000548771 MED23Q9ULK4 1368 aa0.15□□□□□ -2.39
CCDC38-206ENST00000548771 FOCADQ5VW36 1801 aa0.15□□□□□ -2.39
CCDC38-206ENST00000548771 MYH13Q9UKX3 1938 aa0.15□□□□□ -2.39
CCDC38-206ENST00000548771 TNCP24821 2201 aa0.14□□□□□ -2.39
CCDC38-206ENST00000548771 SYNE1Q8NF91 8797 aaKnown RBP0.14□□□□□ -2.39
CCDC38-206ENST00000548771 C10orf142B7Z368 130 aa0.14□□□□□ -2.39
CCDC38-206ENST00000548771 E7EUB6 86 aa0.14□□□□□ -2.39
CCDC38-206ENST00000548771 CST8O60676 142 aa0.14□□□□□ -2.39
CCDC38-206ENST00000548771 NIPSNAP2O75323 286 aa0.14□□□□□ -2.39
CCDC38-206ENST00000548771 COX6B1P14854 86 aa0.14□□□□□ -2.39
CCDC38-206ENST00000548771 MT4P47944 62 aa0.14□□□□□ -2.39
CCDC38-206ENST00000548771 PIGPP57054 158 aa0.14□□□□□ -2.39
CCDC38-206ENST00000548771 RANP62826 216 aaKnown RBP0.14□□□□□ -2.39
CCDC38-206ENST00000548771 MT1HP80294 61 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms