RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	RPUSD4	Q96CM3	377 aa	Known RBP	4.05	□□□□□ -1.76
CPSF7-222	ENST00000544585	TP53RK	Q96S44	253 aa		4.05	□□□□□ -1.76
CPSF7-222	ENST00000544585	C20orf144	Q9BQM9	153 aa		4.05	□□□□□ -1.76
CPSF7-222	ENST00000544585	RSG1	Q9BU20	258 aa		4.05	□□□□□ -1.76
CPSF7-222	ENST00000544585	TMEM70	Q9BUB7	260 aa		4.05	□□□□□ -1.76
CPSF7-222	ENST00000544585	TRAV12-2	A0A075B6T6	113 aa		4.04	□□□□□ -1.76
CPSF7-222	ENST00000544585	ANKRD20A5P	A0PJZ0	165 aa		4.04	□□□□□ -1.76
CPSF7-222	ENST00000544585	RLN2	P04090	185 aa		4.04	□□□□□ -1.76
CPSF7-222	ENST00000544585	GIP	P09681	153 aa	Predicted RBP	4.04	□□□□□ -1.76
CPSF7-222	ENST00000544585	CHTF8	P0CG12	524 aa		4.04	□□□□□ -1.76
CPSF7-222	ENST00000544585	RAB14	P61106	215 aa		4.04	□□□□□ -1.76
CPSF7-222	ENST00000544585	LYZ	P61626	148 aa		4.04	□□□□□ -1.76
CPSF7-222	ENST00000544585	ZNF90	Q03938	601 aa		4.04	□□□□□ -1.76
CPSF7-222	ENST00000544585	SSBP1	Q04837	148 aa	Known RBP	4.04	□□□□□ -1.76
CPSF7-222	ENST00000544585	SLA	Q13239	276 aa		4.04	□□□□□ -1.76
CPSF7-222	ENST00000544585	SP6	Q3SY56	376 aa		4.04	□□□□□ -1.76
CPSF7-222	ENST00000544585	NMS	Q5H8A3	153 aa		4.04	□□□□□ -1.76
CPSF7-222	ENST00000544585	CLLU1	Q5K131	121 aa		4.04	□□□□□ -1.76
CPSF7-222	ENST00000544585	TEX261	Q6UWH6	196 aa		4.04	□□□□□ -1.76
CPSF7-222	ENST00000544585	ZNF680	Q8NEM1	530 aa		4.04	□□□□□ -1.76
CPSF7-222	ENST00000544585	OR2G3	Q8NGZ4	309 aa		4.04	□□□□□ -1.76
CPSF7-222	ENST00000544585	TERB2	Q8NHR7	220 aa		4.04	□□□□□ -1.76
CPSF7-222	ENST00000544585	ASB13	Q8WXK3	278 aa		4.04	□□□□□ -1.76
CPSF7-222	ENST00000544585	TRGV9	Q99603	122 aa		4.04	□□□□□ -1.76
CPSF7-222	ENST00000544585		A0A096LPF7	62 aa		4.03	□□□□□ -1.76
CPSF7-222	ENST00000544585	SMLR1	H3BR10	107 aa		4.03	□□□□□ -1.76
CPSF7-222	ENST00000544585	BCL2L11	O43521	198 aa		4.03	□□□□□ -1.76
CPSF7-222	ENST00000544585	NDUFB6	O95139	128 aa		4.03	□□□□□ -1.76
CPSF7-222	ENST00000544585	OXT	P01178	125 aa		4.03	□□□□□ -1.76
CPSF7-222	ENST00000544585	GATA2	P23769	480 aa	Predicted RBP	4.03	□□□□□ -1.76
CPSF7-222	ENST00000544585	FUS	P35637	526 aa	Known RBP eCLIP	4.03	□□□□□ -1.76
CPSF7-222	ENST00000544585	CCR6	P51684	374 aa		4.03	□□□□□ -1.76
CPSF7-222	ENST00000544585	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		4.03	□□□□□ -1.76
CPSF7-222	ENST00000544585	TMED4	Q7Z7H5	227 aa		4.03	□□□□□ -1.76
CPSF7-222	ENST00000544585	LHFPL1	Q86WI0	220 aa		4.03	□□□□□ -1.76
CPSF7-222	ENST00000544585	BAP18	Q8IXM2	172 aa		4.03	□□□□□ -1.76
CPSF7-222	ENST00000544585	LGI3	Q8N145	548 aa		4.03	□□□□□ -1.76
CPSF7-222	ENST00000544585	RBPMS	Q93062	196 aa	Known RBP	4.03	□□□□□ -1.76
CPSF7-222	ENST00000544585	SLC35E1	Q96K37	410 aa		4.03	□□□□□ -1.76
CPSF7-222	ENST00000544585	TMEM222	Q9H0R3	208 aa		4.03	□□□□□ -1.76
CPSF7-222	ENST00000544585	IGKV1D-37	A0A075B6S9	117 aa		4.02	□□□□□ -1.77
CPSF7-222	ENST00000544585	FAM168B	A1KXE4	195 aa		4.02	□□□□□ -1.77
CPSF7-222	ENST00000544585	ZNF324	O75467	553 aa	Predicted RBP	4.02	□□□□□ -1.77
CPSF7-222	ENST00000544585	CXCL3	P19876	107 aa		4.02	□□□□□ -1.77
CPSF7-222	ENST00000544585	DAZ2	Q13117	558 aa	Known RBP	4.02	□□□□□ -1.77
CPSF7-222	ENST00000544585	OR2F1	Q13607	317 aa		4.02	□□□□□ -1.77
CPSF7-222	ENST00000544585	ZNF726P1	Q15940	193 aa		4.02	□□□□□ -1.77
CPSF7-222	ENST00000544585	PSG3	Q16557	428 aa		4.02	□□□□□ -1.77
CPSF7-222	ENST00000544585	LGALSL	Q3ZCW2	172 aa	Predicted RBP	4.02	□□□□□ -1.77
CPSF7-222	ENST00000544585	RNASE10	Q5GAN6	216 aa	Known RBP	4.02	□□□□□ -1.77
CPSF7-222	ENST00000544585	COA6	Q5JTJ3	125 aa	Known RBP	4.02	□□□□□ -1.77
CPSF7-222	ENST00000544585	S100A7A	Q86SG5	101 aa		4.02	□□□□□ -1.77
CPSF7-222	ENST00000544585	SELENOH	Q8IZQ5	122 aa	Known RBP	4.02	□□□□□ -1.77
CPSF7-222	ENST00000544585	ZNF738	Q8NE65	137 aa		4.02	□□□□□ -1.77
CPSF7-222	ENST00000544585	OR8A1	Q8NGG7	326 aa		4.02	□□□□□ -1.77
CPSF7-222	ENST00000544585	OR10G9	Q8NGN4	311 aa		4.02	□□□□□ -1.77
CPSF7-222	ENST00000544585	OR2T35	Q8NGX2	323 aa		4.02	□□□□□ -1.77
CPSF7-222	ENST00000544585	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	4.02	□□□□□ -1.77
CPSF7-222	ENST00000544585	MTFP1	Q9UDX5	166 aa		4.02	□□□□□ -1.77
CPSF7-222	ENST00000544585	LY96	Q9Y6Y9	160 aa		4.02	□□□□□ -1.77
CPSF7-222	ENST00000544585	TRGV2	A0A075B6R0	118 aa		4.01	□□□□□ -1.77
CPSF7-222	ENST00000544585	TRAV8-2	A0A0B4J237	113 aa		4.01	□□□□□ -1.77
CPSF7-222	ENST00000544585	HMSD	A8MTL9	139 aa		4.01	□□□□□ -1.77
CPSF7-222	ENST00000544585	MPDU1	O75352	247 aa		4.01	□□□□□ -1.77
CPSF7-222	ENST00000544585	OR5AC1	P0C628	307 aa		4.01	□□□□□ -1.77
CPSF7-222	ENST00000544585	AKAIN1	P0CW23	69 aa		4.01	□□□□□ -1.77
CPSF7-222	ENST00000544585	DNAH10OS	P0CZ25	163 aa		4.01	□□□□□ -1.77
CPSF7-222	ENST00000544585	RPL7	P18124	248 aa	Known RBP	4.01	□□□□□ -1.77
CPSF7-222	ENST00000544585	ORM2	P19652	201 aa		4.01	□□□□□ -1.77
CPSF7-222	ENST00000544585	EVI2A	P22794	236 aa		4.01	□□□□□ -1.77
CPSF7-222	ENST00000544585	HIST1H1A	Q02539	215 aa	Predicted RBP	4.01	□□□□□ -1.77
CPSF7-222	ENST00000544585	LYPD5	Q6UWN5	251 aa		4.01	□□□□□ -1.77
CPSF7-222	ENST00000544585	COMMD7	Q86VX2	200 aa		4.01	□□□□□ -1.77
CPSF7-222	ENST00000544585	CEND1	Q8N111	149 aa		4.01	□□□□□ -1.77
CPSF7-222	ENST00000544585	C10orf126	Q8N4M7	172 aa		4.01	□□□□□ -1.77
CPSF7-222	ENST00000544585	LHFPL5	Q8TAF8	219 aa		4.01	□□□□□ -1.77
CPSF7-222	ENST00000544585	DTD1	Q8TEA8	209 aa		4.01	□□□□□ -1.77
CPSF7-222	ENST00000544585	IL22RA2	Q969J5	263 aa		4.01	□□□□□ -1.77
CPSF7-222	ENST00000544585	SLC25A21	Q9BQT8	299 aa	Predicted RBP	4.01	□□□□□ -1.77
CPSF7-222	ENST00000544585	TMEM147	Q9BVK8	224 aa		4.01	□□□□□ -1.77
CPSF7-222	ENST00000544585	MED9	Q9NWA0	146 aa		4.01	□□□□□ -1.77
CPSF7-222	ENST00000544585	C14orf166	Q9Y224	244 aa	Known RBP	4.01	□□□□□ -1.77
CPSF7-222	ENST00000544585	ICOS	Q9Y6W8	199 aa		4.01	□□□□□ -1.77
CPSF7-222	ENST00000544585	TMEM56-RWDD3	S4R434	201 aa		4.01	□□□□□ -1.77
CPSF7-222	ENST00000544585	MYCBP2	O75592	4640 aa		4	□□□□□ -1.77
CPSF7-222	ENST00000544585	PIGBOS1	A0A0B4J2F0	54 aa		4	□□□□□ -1.77
CPSF7-222	ENST00000544585	HSBP1L1	C9JCN9	74 aa		4	□□□□□ -1.77
CPSF7-222	ENST00000544585		G3V3Q6	166 aa		4	□□□□□ -1.77
CPSF7-222	ENST00000544585	PSCA	O43653	123 aa		4	□□□□□ -1.77
CPSF7-222	ENST00000544585	MPC2	O95563	127 aa		4	□□□□□ -1.77
CPSF7-222	ENST00000544585	CD3D	P04234	171 aa		4	□□□□□ -1.77
CPSF7-222	ENST00000544585	AKR1C4	P17516	323 aa		4	□□□□□ -1.77
CPSF7-222	ENST00000544585	FGF8	P55075	233 aa	Predicted RBP	4	□□□□□ -1.77
CPSF7-222	ENST00000544585	SURF2	Q15527	256 aa	Predicted RBP	4	□□□□□ -1.77
CPSF7-222	ENST00000544585	RNF182	Q8N6D2	247 aa		4	□□□□□ -1.77
CPSF7-222	ENST00000544585	TMEM229B	Q8NBD8	167 aa		4	□□□□□ -1.77
CPSF7-222	ENST00000544585	OR13C8	Q8NGS7	320 aa		4	□□□□□ -1.77
CPSF7-222	ENST00000544585	OR1S1	Q8NH92	325 aa		4	□□□□□ -1.77
CPSF7-222	ENST00000544585	SEC22C	Q9BRL7	303 aa		4	□□□□□ -1.77
CPSF7-222	ENST00000544585	PYGO2	Q9BRQ0	406 aa		4	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms