RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 GNG4P50150 75 aa7.88□□□□□ -1.15
TNFRSF1A-208ENST00000536194 ZNF876PQ49A33 203 aa7.88□□□□□ -1.15
TNFRSF1A-208ENST00000536194 PARLQ9H300 379 aa7.88□□□□□ -1.15
TNFRSF1A-208ENST00000536194 IL36BQ9NZH7 164 aa7.88□□□□□ -1.15
TNFRSF1A-208ENST00000536194 C19orf71A6NCJ1 209 aa7.87□□□□□ -1.15
TNFRSF1A-208ENST00000536194 H3BNG1 76 aa7.87□□□□□ -1.15
TNFRSF1A-208ENST00000536194 K7EN84 100 aa7.87□□□□□ -1.15
TNFRSF1A-208ENST00000536194 ARMS2P0C7Q2 107 aa7.87□□□□□ -1.15
TNFRSF1A-208ENST00000536194 MGST1P10620 155 aaKnown RBP7.87□□□□□ -1.15
TNFRSF1A-208ENST00000536194 S100A4P26447 101 aaKnown RBP7.87□□□□□ -1.15
TNFRSF1A-208ENST00000536194 CRYBA4P53673 196 aa7.87□□□□□ -1.15
TNFRSF1A-208ENST00000536194 PTH2Q96A98 100 aa7.87□□□□□ -1.15
TNFRSF1A-208ENST00000536194 SMIM12Q96EX1 92 aa7.87□□□□□ -1.15
TNFRSF1A-208ENST00000536194 EIF5A2Q9GZV4 153 aaKnown RBP7.87□□□□□ -1.15
TNFRSF1A-208ENST00000536194 SCRT2Q9NQ03 307 aa7.87□□□□□ -1.15
TNFRSF1A-208ENST00000536194 A0A096LPF7 62 aa7.86□□□□□ -1.15
TNFRSF1A-208ENST00000536194 RS1O15537 224 aa7.86□□□□□ -1.15
TNFRSF1A-208ENST00000536194 SRP19P09132 144 aaKnown RBP7.86□□□□□ -1.15
TNFRSF1A-208ENST00000536194 P0DMU3 169 aa7.86□□□□□ -1.15
TNFRSF1A-208ENST00000536194 FAM231AP0DMU4 169 aa7.86□□□□□ -1.15
TNFRSF1A-208ENST00000536194 FAM231CP0DMU5 169 aa7.86□□□□□ -1.15
TNFRSF1A-208ENST00000536194 CFAP126Q5VTH2 177 aa7.86□□□□□ -1.15
TNFRSF1A-208ENST00000536194 DMRTA1Q5VZB9 504 aa7.86□□□□□ -1.15
TNFRSF1A-208ENST00000536194 OR4C5Q8NGB2 326 aa7.86□□□□□ -1.15
TNFRSF1A-208ENST00000536194 JPT2Q9H910 190 aa7.86□□□□□ -1.15
TNFRSF1A-208ENST00000536194 PRO0255Q9UI72 69 aa7.86□□□□□ -1.15
TNFRSF1A-208ENST00000536194 HHLA3Q9XRX5 114 aa7.86□□□□□ -1.15
TNFRSF1A-208ENST00000536194 VPS13DQ5THJ4 4388 aa7.86□□□□□ -1.15
TNFRSF1A-208ENST00000536194 TRGV4A0A0C4DH28 118 aa7.85□□□□□ -1.15
TNFRSF1A-208ENST00000536194 C9JQL5 133 aa7.85□□□□□ -1.15
TNFRSF1A-208ENST00000536194 PAX4O43316 350 aa7.85□□□□□ -1.15
TNFRSF1A-208ENST00000536194 NDUFS6O75380 124 aaKnown RBP7.85□□□□□ -1.15
TNFRSF1A-208ENST00000536194 CXCL1P09341 107 aa7.85□□□□□ -1.15
TNFRSF1A-208ENST00000536194 GATA1P15976 413 aaPredicted RBP7.85□□□□□ -1.15
TNFRSF1A-208ENST00000536194 SRSF3P84103 164 aaKnown RBP7.85□□□□□ -1.15
TNFRSF1A-208ENST00000536194 PIK3CD-AS1Q5SR53 167 aa7.85□□□□□ -1.15
TNFRSF1A-208ENST00000536194 OCC1Q8TAD7 63 aa7.85□□□□□ -1.15
TNFRSF1A-208ENST00000536194 IGHV3-73A0A0B4J1V6 119 aa7.84□□□□□ -1.15
TNFRSF1A-208ENST00000536194 SNAI2O43623 268 aa7.84□□□□□ -1.15
TNFRSF1A-208ENST00000536194 MED14OSP0DP75 135 aa7.84□□□□□ -1.15
TNFRSF1A-208ENST00000536194 GZMBP10144 247 aa7.84□□□□□ -1.15
TNFRSF1A-208ENST00000536194 CEBPGP53567 150 aa7.84□□□□□ -1.15
TNFRSF1A-208ENST00000536194 IFITM2Q01629 132 aa7.84□□□□□ -1.15
TNFRSF1A-208ENST00000536194 UFSP1Q6NVU6 142 aa7.84□□□□□ -1.15
TNFRSF1A-208ENST00000536194 SSBP4Q9BWG4 385 aaPredicted RBP7.84□□□□□ -1.15
TNFRSF1A-208ENST00000536194 SAMD10Q9BYL1 202 aa7.84□□□□□ -1.15
TNFRSF1A-208ENST00000536194 LINC00588Q9Y4M8 146 aa7.84□□□□□ -1.15
TNFRSF1A-208ENST00000536194 LOC100131303A0A0U1RQF7 123 aa7.83□□□□□ -1.16
TNFRSF1A-208ENST00000536194 M0R381 172 aa7.83□□□□□ -1.16
TNFRSF1A-208ENST00000536194 NXPH4O95158 308 aa7.83□□□□□ -1.16
TNFRSF1A-208ENST00000536194 OR5AL1P0C617 328 aa7.83□□□□□ -1.16
TNFRSF1A-208ENST00000536194 SLAQ13239 276 aa7.83□□□□□ -1.16
TNFRSF1A-208ENST00000536194 RNF212Q495C1 297 aa7.83□□□□□ -1.16
TNFRSF1A-208ENST00000536194 NUDT10Q8NFP7 164 aa7.83□□□□□ -1.16
TNFRSF1A-208ENST00000536194 OR2D3Q8NGH3 330 aa7.83□□□□□ -1.16
TNFRSF1A-208ENST00000536194 OR10AG1Q8NH19 301 aa7.83□□□□□ -1.16
TNFRSF1A-208ENST00000536194 NUDT11Q96G61 164 aa7.83□□□□□ -1.16
TNFRSF1A-208ENST00000536194 PHLDA3Q9Y5J5 127 aa7.83□□□□□ -1.16
TNFRSF1A-208ENST00000536194 KMT2AQ03164 3969 aa7.83□□□□□ -1.16
TNFRSF1A-208ENST00000536194 MUC21A0A0G2JKD1 596 aa7.82□□□□□ -1.16
TNFRSF1A-208ENST00000536194 MUC21A0A140T8X8 626 aa7.82□□□□□ -1.16
TNFRSF1A-208ENST00000536194 A8MWV9 139 aa7.82□□□□□ -1.16
TNFRSF1A-208ENST00000536194 K7EQD1 137 aa7.82□□□□□ -1.16
TNFRSF1A-208ENST00000536194 P01737 135 aa7.82□□□□□ -1.16
TNFRSF1A-208ENST00000536194 IGLC6P0CF74 106 aa7.82□□□□□ -1.16
TNFRSF1A-208ENST00000536194 ESRGQ1W209 222 aa7.82□□□□□ -1.16
TNFRSF1A-208ENST00000536194 Q6ZSN1 163 aa7.82□□□□□ -1.16
TNFRSF1A-208ENST00000536194 UBE2DNLQ8IWF7 75 aa7.82□□□□□ -1.16
TNFRSF1A-208ENST00000536194 SLC25A29Q8N8R3 303 aa7.82□□□□□ -1.16
TNFRSF1A-208ENST00000536194 SYT8Q8NBV8 401 aa7.82□□□□□ -1.16
TNFRSF1A-208ENST00000536194 DAZAP1Q96EP5 407 aaKnown RBP7.82□□□□□ -1.16
TNFRSF1A-208ENST00000536194 SMIM7Q9BQ49 75 aa7.82□□□□□ -1.16
TNFRSF1A-208ENST00000536194 RNASE7Q9H1E1 156 aaKnown RBP7.82□□□□□ -1.16
TNFRSF1A-208ENST00000536194 BIN3Q9NQY0 253 aa7.82□□□□□ -1.16
TNFRSF1A-208ENST00000536194 ICOSQ9Y6W8 199 aa7.82□□□□□ -1.16
TNFRSF1A-208ENST00000536194 CIDEAO60543 219 aa7.81□□□□□ -1.16
TNFRSF1A-208ENST00000536194 CRYGDP07320 174 aa7.81□□□□□ -1.16
TNFRSF1A-208ENST00000536194 GYPEP15421 78 aa7.81□□□□□ -1.16
TNFRSF1A-208ENST00000536194 ZFP2Q6ZN57 461 aa7.81□□□□□ -1.16
TNFRSF1A-208ENST00000536194 ZFP82Q8N141 532 aa7.81□□□□□ -1.16
TNFRSF1A-208ENST00000536194 FER1L6-AS1Q8NA97 138 aa7.81□□□□□ -1.16
TNFRSF1A-208ENST00000536194 ZNRF2Q8NHG8 242 aa7.81□□□□□ -1.16
TNFRSF1A-208ENST00000536194 SFRP2Q96HF1 295 aa7.81□□□□□ -1.16
TNFRSF1A-208ENST00000536194 A0A087WWL8 130 aa7.8□□□□□ -1.16
TNFRSF1A-208ENST00000536194 TRBV6-4A0A1B0GX49 114 aa7.8□□□□□ -1.16
TNFRSF1A-208ENST00000536194 ZNF727A8MUV8 499 aa7.8□□□□□ -1.16
TNFRSF1A-208ENST00000536194 CCL18P55774 89 aa7.8□□□□□ -1.16
TNFRSF1A-208ENST00000536194 RPS20P60866 119 aaKnown RBP7.8□□□□□ -1.16
TNFRSF1A-208ENST00000536194 MRPL23Q16540 153 aaKnown RBP7.8□□□□□ -1.16
TNFRSF1A-208ENST00000536194 LINC01551Q86U37 167 aa7.8□□□□□ -1.16
TNFRSF1A-208ENST00000536194 Q9UF83 564 aa7.8□□□□□ -1.16
TNFRSF1A-208ENST00000536194 LY96Q9Y6Y9 160 aa7.8□□□□□ -1.16
TNFRSF1A-208ENST00000536194 IGLV2-18A0A075B6J9 118 aa7.79□□□□□ -1.16
TNFRSF1A-208ENST00000536194 FAM3BP58499 235 aaPredicted RBP7.79□□□□□ -1.16
TNFRSF1A-208ENST00000536194 SSTP61278 116 aa7.79□□□□□ -1.16
TNFRSF1A-208ENST00000536194 PEA15Q15121 130 aa7.79□□□□□ -1.16
TNFRSF1A-208ENST00000536194 FAM74A4Q5TZK3 123 aa7.79□□□□□ -1.16
TNFRSF1A-208ENST00000536194 FAM231DQ6ZW35 169 aa7.79□□□□□ -1.16
TNFRSF1A-208ENST00000536194 RPP21Q9H633 154 aaKnown RBP7.79□□□□□ -1.16
TNFRSF1A-208ENST00000536194 MRPS16Q9Y3D3 137 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms