RNA–Protein interactions for RNA: ENST00000533671.1

NXF1-217, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-217ENST00000533671 PCNPQ8WW12 178 aaKnown RBP12.18□□□□□ -0.46
NXF1-217ENST00000533671 HYDINQ4G0P3 5121 aa12.17□□□□□ -0.46
NXF1-217ENST00000533671 A0A096LPF7 62 aa12.17□□□□□ -0.46
NXF1-217ENST00000533671 PGPEP1LA6NFU8 196 aa12.17□□□□□ -0.46
NXF1-217ENST00000533671 ZNF506Q5JVG8 444 aa12.17□□□□□ -0.46
NXF1-217ENST00000533671 DERL1Q9BUN8 251 aa12.17□□□□□ -0.46
NXF1-217ENST00000533671 MGST1P10620 155 aaKnown RBP12.16□□□□□ -0.46
NXF1-217ENST00000533671 LINC01559Q495D7 138 aa12.16□□□□□ -0.46
NXF1-217ENST00000533671 SYT8Q8NBV8 401 aa12.16□□□□□ -0.46
NXF1-217ENST00000533671 IL36BQ9NZH7 164 aa12.16□□□□□ -0.46
NXF1-217ENST00000533671 LINC00588Q9Y4M8 146 aa12.16□□□□□ -0.46
NXF1-217ENST00000533671 CIDEAO60543 219 aa12.15□□□□□ -0.46
NXF1-217ENST00000533671 ARMS2P0C7Q2 107 aa12.15□□□□□ -0.46
NXF1-217ENST00000533671 GNG4P50150 75 aa12.15□□□□□ -0.46
NXF1-217ENST00000533671 MRPL23Q16540 153 aaKnown RBP12.15□□□□□ -0.46
NXF1-217ENST00000533671 CENPWQ5EE01 88 aa12.15□□□□□ -0.46
NXF1-217ENST00000533671 PTH2Q96A98 100 aa12.15□□□□□ -0.46
NXF1-217ENST00000533671 DAZAP1Q96EP5 407 aaKnown RBP12.15□□□□□ -0.46
NXF1-217ENST00000533671 MLST8Q9BVC4 326 aa12.15□□□□□ -0.46
NXF1-217ENST00000533671 PHLDA3Q9Y5J5 127 aa12.15□□□□□ -0.46
NXF1-217ENST00000533671 IGHV3-73A0A0B4J1V6 119 aa12.14□□□□□ -0.47
NXF1-217ENST00000533671 RAB19A4D1S5 217 aa12.14□□□□□ -0.47
NXF1-217ENST00000533671 RS1O15537 224 aa12.14□□□□□ -0.47
NXF1-217ENST00000533671 ESRGQ1W209 222 aa12.14□□□□□ -0.47
NXF1-217ENST00000533671 DNLZQ5SXM8 178 aa12.14□□□□□ -0.47
NXF1-217ENST00000533671 CFAP126Q5VTH2 177 aa12.14□□□□□ -0.47
NXF1-217ENST00000533671 RBFOX3A6NFN3 312 aa12.13□□□□□ -0.47
NXF1-217ENST00000533671 A8MWV9 139 aa12.13□□□□□ -0.47
NXF1-217ENST00000533671 GYPEP15421 78 aa12.13□□□□□ -0.47
NXF1-217ENST00000533671 SRIP30626 198 aa12.13□□□□□ -0.47
NXF1-217ENST00000533671 RPL19P84098 196 aaKnown RBP12.12□□□□□ -0.47
NXF1-217ENST00000533671 PIK3CD-AS1Q5SR53 167 aa12.12□□□□□ -0.47
NXF1-217ENST00000533671 PRADC1Q9BSG0 188 aa12.12□□□□□ -0.47
NXF1-217ENST00000533671 BIN3Q9NQY0 253 aa12.12□□□□□ -0.47
NXF1-217ENST00000533671 VPS13DQ5THJ4 4388 aa12.11□□□□□ -0.47
NXF1-217ENST00000533671 GATA1P15976 413 aaPredicted RBP12.11□□□□□ -0.47
NXF1-217ENST00000533671 NEGR1Q7Z3B1 354 aa12.11□□□□□ -0.47
NXF1-217ENST00000533671 ZNRF2Q8NHG8 242 aa12.11□□□□□ -0.47
NXF1-217ENST00000533671 SMIM12Q96EX1 92 aa12.11□□□□□ -0.47
NXF1-217ENST00000533671 EIF5A2Q9GZV4 153 aaKnown RBP12.11□□□□□ -0.47
NXF1-217ENST00000533671 KMT2AQ03164 3969 aa12.1□□□□□ -0.47
NXF1-217ENST00000533671 K7EQD1 137 aa12.1□□□□□ -0.47
NXF1-217ENST00000533671 M0R381 172 aa12.1□□□□□ -0.47
NXF1-217ENST00000533671 CEBPGP53567 150 aa12.1□□□□□ -0.47
NXF1-217ENST00000533671 DMRTA1Q5VZB9 504 aa12.1□□□□□ -0.47
NXF1-217ENST00000533671 ZFP82Q8N141 532 aa12.1□□□□□ -0.47
NXF1-217ENST00000533671 LYPD6BQ8NI32 183 aa12.1□□□□□ -0.47
NXF1-217ENST00000533671 Q9H8V8 135 aa12.1□□□□□ -0.47
NXF1-217ENST00000533671 MRPS16Q9Y3D3 137 aaKnown RBP12.1□□□□□ -0.47
NXF1-217ENST00000533671 CXCL1P09341 107 aa12.09□□□□□ -0.47
NXF1-217ENST00000533671 MED14OSP0DP75 135 aa12.09□□□□□ -0.47
NXF1-217ENST00000533671 RHOHQ15669 191 aa12.09□□□□□ -0.47
NXF1-217ENST00000533671 TOR2AQ5JU69 321 aa12.09□□□□□ -0.47
NXF1-217ENST00000533671 PARLQ9H300 379 aa12.09□□□□□ -0.47
NXF1-217ENST00000533671 SOHLH1Q5JUK2 328 aa12.08□□□□□ -0.48
NXF1-217ENST00000533671 ZFP2Q6ZN57 461 aa12.08□□□□□ -0.48
NXF1-217ENST00000533671 SH2D6Q7Z4S9 175 aa12.08□□□□□ -0.48
NXF1-217ENST00000533671 SLC25A29Q8N8R3 303 aa12.08□□□□□ -0.48
NXF1-217ENST00000533671 JPT2Q9H910 190 aa12.08□□□□□ -0.48
NXF1-217ENST00000533671 LOC100131303A0A0U1RQF7 123 aa12.07□□□□□ -0.48
NXF1-217ENST00000533671 NBDYA0A0U1RRE5 68 aa12.07□□□□□ -0.48
NXF1-217ENST00000533671 TRBV6-4A0A1B0GX49 114 aa12.07□□□□□ -0.48
NXF1-217ENST00000533671 TMEM250H0YL14 139 aa12.07□□□□□ -0.48
NXF1-217ENST00000533671 RHODO00212 210 aa12.07□□□□□ -0.48
NXF1-217ENST00000533671 IGLV2-8P01709 118 aa12.07□□□□□ -0.48
NXF1-217ENST00000533671 P01737 135 aa12.07□□□□□ -0.48
NXF1-217ENST00000533671 RPS20P60866 119 aaKnown RBP12.07□□□□□ -0.48
NXF1-217ENST00000533671 FAM74A4Q5TZK3 123 aa12.07□□□□□ -0.48
NXF1-217ENST00000533671 SPANXN1Q5VSR9 72 aa12.07□□□□□ -0.48
NXF1-217ENST00000533671 LYPD5Q6UWN5 251 aa12.07□□□□□ -0.48
NXF1-217ENST00000533671 OR2D3Q8NGH3 330 aa12.07□□□□□ -0.48
NXF1-217ENST00000533671 UPK3BQ9BT76 320 aa12.07□□□□□ -0.48
NXF1-217ENST00000533671 SCRT2Q9NQ03 307 aa12.07□□□□□ -0.48
NXF1-217ENST00000533671 XKRY2A2RUG3 117 aa12.06□□□□□ -0.48
NXF1-217ENST00000533671 SSTP61278 116 aa12.06□□□□□ -0.48
NXF1-217ENST00000533671 TEX261Q6UWH6 196 aa12.06□□□□□ -0.48
NXF1-217ENST00000533671 Q6ZR54 194 aa12.06□□□□□ -0.48
NXF1-217ENST00000533671 ZNF575Q86XF7 245 aa12.06□□□□□ -0.48
NXF1-217ENST00000533671 TRBV20OR9-2A0A075B6H5 130 aa12.05□□□□□ -0.48
NXF1-217ENST00000533671 A0A087WWL8 130 aa12.05□□□□□ -0.48
NXF1-217ENST00000533671 TTC32Q5I0X7 151 aa12.05□□□□□ -0.48
NXF1-217ENST00000533671 C1orf134Q5TEV5 83 aa12.05□□□□□ -0.48
NXF1-217ENST00000533671 SFRP2Q96HF1 295 aa12.05□□□□□ -0.48
NXF1-217ENST00000533671 FAM210AQ96ND0 272 aa12.05□□□□□ -0.48
NXF1-217ENST00000533671 TPPP3Q9BW30 176 aa12.05□□□□□ -0.48
NXF1-217ENST00000533671 SAMD10Q9BYL1 202 aa12.05□□□□□ -0.48
NXF1-217ENST00000533671 DNAH6Q9C0G6 4158 aa12.04□□□□□ -0.48
NXF1-217ENST00000533671 MUC21A0A0G2JKD1 596 aa12.04□□□□□ -0.48
NXF1-217ENST00000533671 MUC21A0A140T8X8 626 aa12.04□□□□□ -0.48
NXF1-217ENST00000533671 C19orf71A6NCJ1 209 aa12.04□□□□□ -0.48
NXF1-217ENST00000533671 NXPH4O95158 308 aa12.04□□□□□ -0.48
NXF1-217ENST00000533671 LINC00336Q6ZUF6 198 aa12.04□□□□□ -0.48
NXF1-217ENST00000533671 OR10AG1Q8NH19 301 aa12.04□□□□□ -0.48
NXF1-217ENST00000533671 SIVA1O15304 175 aa12.03□□□□□ -0.48
NXF1-217ENST00000533671 SNAI2O43623 268 aa12.03□□□□□ -0.48
NXF1-217ENST00000533671 OR5AL1P0C617 328 aa12.03□□□□□ -0.48
NXF1-217ENST00000533671 GZMBP10144 247 aa12.03□□□□□ -0.48
NXF1-217ENST00000533671 FER1L6-AS1Q8NA97 138 aa12.03□□□□□ -0.48
NXF1-217ENST00000533671 OCC1Q8TAD7 63 aa12.03□□□□□ -0.48
NXF1-217ENST00000533671 SSBP4Q9BWG4 385 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms