RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 GRIFINA4D1Z8 144 aa11.26□□□□□ -0.61
SSSCA1-202ENST00000526433 PDE6DO43924 150 aa11.26□□□□□ -0.61
SSSCA1-202ENST00000526433 FAM3BP58499 235 aaPredicted RBP11.26□□□□□ -0.61
SSSCA1-202ENST00000526433 DNLZQ5SXM8 178 aa11.26□□□□□ -0.61
SSSCA1-202ENST00000526433 MED9Q9NWA0 146 aa11.26□□□□□ -0.61
SSSCA1-202ENST00000526433 LINC00588Q9Y4M8 146 aa11.26□□□□□ -0.61
SSSCA1-202ENST00000526433 TMSB15BA0A087X1C1 80 aa11.25□□□□□ -0.61
SSSCA1-202ENST00000526433 RAB19A4D1S5 217 aa11.25□□□□□ -0.61
SSSCA1-202ENST00000526433 M0R2N4 97 aa11.25□□□□□ -0.61
SSSCA1-202ENST00000526433 RS1O15537 224 aa11.25□□□□□ -0.61
SSSCA1-202ENST00000526433 TAGLN2P37802 199 aaKnown RBP11.25□□□□□ -0.61
SSSCA1-202ENST00000526433 ESRGQ1W209 222 aa11.25□□□□□ -0.61
SSSCA1-202ENST00000526433 LINC01559Q495D7 138 aa11.25□□□□□ -0.61
SSSCA1-202ENST00000526433 ZNF506Q5JVG8 444 aa11.25□□□□□ -0.61
SSSCA1-202ENST00000526433 IL36BQ9NZH7 164 aa11.25□□□□□ -0.61
SSSCA1-202ENST00000526433 IGLV2-18A0A075B6J9 118 aa11.24□□□□□ -0.61
SSSCA1-202ENST00000526433 H3BVH4 76 aa11.24□□□□□ -0.61
SSSCA1-202ENST00000526433 ARMS2P0C7Q2 107 aa11.24□□□□□ -0.61
SSSCA1-202ENST00000526433 CFAP126Q5VTH2 177 aa11.24□□□□□ -0.61
SSSCA1-202ENST00000526433 LYPD6BQ8NI32 183 aa11.24□□□□□ -0.61
SSSCA1-202ENST00000526433 ICOSQ9Y6W8 199 aa11.24□□□□□ -0.61
SSSCA1-202ENST00000526433 CENPWQ5EE01 88 aa11.23□□□□□ -0.61
SSSCA1-202ENST00000526433 PRR27Q6MZM9 219 aa11.23□□□□□ -0.61
SSSCA1-202ENST00000526433 ZNRF2Q8NHG8 242 aa11.23□□□□□ -0.61
SSSCA1-202ENST00000526433 CIDEAO60543 219 aa11.22□□□□□ -0.61
SSSCA1-202ENST00000526433 IGLV2-8P01709 118 aa11.22□□□□□ -0.61
SSSCA1-202ENST00000526433 MRPL23Q16540 153 aaKnown RBP11.22□□□□□ -0.61
SSSCA1-202ENST00000526433 DNAH2Q9P225 4427 aa11.21□□□□□ -0.61
SSSCA1-202ENST00000526433 IGHV3-73A0A0B4J1V6 119 aa11.21□□□□□ -0.61
SSSCA1-202ENST00000526433 RBFOX3A6NFN3 312 aa11.21□□□□□ -0.61
SSSCA1-202ENST00000526433 MGST1P10620 155 aaKnown RBP11.21□□□□□ -0.61
SSSCA1-202ENST00000526433 GYPEP15421 78 aa11.21□□□□□ -0.61
SSSCA1-202ENST00000526433 GATA1P15976 413 aaPredicted RBP11.21□□□□□ -0.61
SSSCA1-202ENST00000526433 GNG4P50150 75 aa11.21□□□□□ -0.61
SSSCA1-202ENST00000526433 RPL19P84098 196 aaKnown RBP11.21□□□□□ -0.61
SSSCA1-202ENST00000526433 PIK3CD-AS1Q5SR53 167 aa11.21□□□□□ -0.61
SSSCA1-202ENST00000526433 DMRTA1Q5VZB9 504 aa11.21□□□□□ -0.61
SSSCA1-202ENST00000526433 SCRT2Q9NQ03 307 aa11.21□□□□□ -0.61
SSSCA1-202ENST00000526433 DNAH17Q9UFH2 4485 aa11.21□□□□□ -0.62
SSSCA1-202ENST00000526433 A8MWV9 139 aa11.2□□□□□ -0.62
SSSCA1-202ENST00000526433 Q6ZR54 194 aa11.2□□□□□ -0.62
SSSCA1-202ENST00000526433 SYT8Q8NBV8 401 aa11.2□□□□□ -0.62
SSSCA1-202ENST00000526433 PCNPQ8WW12 178 aaKnown RBP11.2□□□□□ -0.62
SSSCA1-202ENST00000526433 PHLDA3Q9Y5J5 127 aa11.2□□□□□ -0.62
SSSCA1-202ENST00000526433 K7EQD1 137 aa11.19□□□□□ -0.62
SSSCA1-202ENST00000526433 LYPD5Q6UWN5 251 aa11.19□□□□□ -0.62
SSSCA1-202ENST00000526433 NEGR1Q7Z3B1 354 aa11.19□□□□□ -0.62
SSSCA1-202ENST00000526433 DAZAP1Q96EP5 407 aaKnown RBP11.19□□□□□ -0.62
SSSCA1-202ENST00000526433 SMIM12Q96EX1 92 aa11.19□□□□□ -0.62
SSSCA1-202ENST00000526433 PARLQ9H300 379 aa11.19□□□□□ -0.62
SSSCA1-202ENST00000526433 Q9H8V8 135 aa11.19□□□□□ -0.62
SSSCA1-202ENST00000526433 JPT2Q9H910 190 aa11.19□□□□□ -0.62
SSSCA1-202ENST00000526433 MRPS16Q9Y3D3 137 aaKnown RBP11.19□□□□□ -0.62
SSSCA1-202ENST00000526433 TRBV20OR9-2A0A075B6H5 130 aa11.18□□□□□ -0.62
SSSCA1-202ENST00000526433 LOC100131303A0A0U1RQF7 123 aa11.18□□□□□ -0.62
SSSCA1-202ENST00000526433 CXCL1P09341 107 aa11.18□□□□□ -0.62
SSSCA1-202ENST00000526433 SRIP30626 198 aa11.18□□□□□ -0.62
SSSCA1-202ENST00000526433 ZFP2Q6ZN57 461 aa11.18□□□□□ -0.62
SSSCA1-202ENST00000526433 SLC25A29Q8N8R3 303 aa11.18□□□□□ -0.62
SSSCA1-202ENST00000526433 UPK3BQ9BT76 320 aa11.18□□□□□ -0.62
SSSCA1-202ENST00000526433 EPPK1P58107 5090 aaKnown RBP11.18□□□□□ -0.62
SSSCA1-202ENST00000526433 FRAS1Q86XX4 4008 aa11.18□□□□□ -0.62
SSSCA1-202ENST00000526433 TRBV6-4A0A1B0GX49 114 aa11.17□□□□□ -0.62
SSSCA1-202ENST00000526433 M0R381 172 aa11.17□□□□□ -0.62
SSSCA1-202ENST00000526433 MED14OSP0DP75 135 aa11.17□□□□□ -0.62
SSSCA1-202ENST00000526433 Q6ZSN1 163 aa11.17□□□□□ -0.62
SSSCA1-202ENST00000526433 SAMD10Q9BYL1 202 aa11.17□□□□□ -0.62
SSSCA1-202ENST00000526433 NBDYA0A0U1RRE5 68 aa11.16□□□□□ -0.62
SSSCA1-202ENST00000526433 C19orf71A6NCJ1 209 aa11.16□□□□□ -0.62
SSSCA1-202ENST00000526433 TMEM250H0YL14 139 aa11.16□□□□□ -0.62
SSSCA1-202ENST00000526433 TOR2AQ5JU69 321 aa11.16□□□□□ -0.62
SSSCA1-202ENST00000526433 TEX261Q6UWH6 196 aa11.16□□□□□ -0.62
SSSCA1-202ENST00000526433 ZFP82Q8N141 532 aa11.16□□□□□ -0.62
SSSCA1-202ENST00000526433 OCC1Q8TAD7 63 aa11.16□□□□□ -0.62
SSSCA1-202ENST00000526433 SFRP2Q96HF1 295 aa11.16□□□□□ -0.62
SSSCA1-202ENST00000526433 PRADC1Q9BSG0 188 aa11.16□□□□□ -0.62
SSSCA1-202ENST00000526433 SSBP4Q9BWG4 385 aaPredicted RBP11.16□□□□□ -0.62
SSSCA1-202ENST00000526433 EIF5A2Q9GZV4 153 aaKnown RBP11.16□□□□□ -0.62
SSSCA1-202ENST00000526433 BIN3Q9NQY0 253 aa11.16□□□□□ -0.62
SSSCA1-202ENST00000526433 RHOHQ15669 191 aa11.15□□□□□ -0.62
SSSCA1-202ENST00000526433 UFSP1Q6NVU6 142 aa11.15□□□□□ -0.62
SSSCA1-202ENST00000526433 OR2D3Q8NGH3 330 aa11.15□□□□□ -0.62
SSSCA1-202ENST00000526433 FAM210AQ96ND0 272 aa11.15□□□□□ -0.62
SSSCA1-202ENST00000526433 SNAI2O43623 268 aa11.14□□□□□ -0.63
SSSCA1-202ENST00000526433 RPS20P60866 119 aaKnown RBP11.14□□□□□ -0.63
SSSCA1-202ENST00000526433 SH2D6Q7Z4S9 175 aa11.14□□□□□ -0.63
SSSCA1-202ENST00000526433 OR10AG1Q8NH19 301 aa11.14□□□□□ -0.63
SSSCA1-202ENST00000526433 A0A087WWL8 130 aa11.13□□□□□ -0.63
SSSCA1-202ENST00000526433 MUC21A0A0G2JKD1 596 aa11.13□□□□□ -0.63
SSSCA1-202ENST00000526433 MUC21A0A140T8X8 626 aa11.13□□□□□ -0.63
SSSCA1-202ENST00000526433 RHODO00212 210 aa11.13□□□□□ -0.63
SSSCA1-202ENST00000526433 RTL8CO15255 209 aa11.13□□□□□ -0.63
SSSCA1-202ENST00000526433 NXPH4O95158 308 aa11.13□□□□□ -0.63
SSSCA1-202ENST00000526433 P01737 135 aa11.13□□□□□ -0.63
SSSCA1-202ENST00000526433 CRYGDP07320 174 aa11.13□□□□□ -0.63
SSSCA1-202ENST00000526433 OR5AL1P0C617 328 aa11.13□□□□□ -0.63
SSSCA1-202ENST00000526433 GZMBP10144 247 aa11.13□□□□□ -0.63
SSSCA1-202ENST00000526433 CEBPGP53567 150 aa11.13□□□□□ -0.63
SSSCA1-202ENST00000526433 C1orf134Q5TEV5 83 aa11.13□□□□□ -0.63
SSSCA1-202ENST00000526433 FAM74A4Q5TZK3 123 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms