RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 ADAMTSL5Q6ZMM2 481 aa6.04□□□□□ -1.44
SCN1A-207ENST00000507401 FAM19A2Q8N3H0 131 aa6.04□□□□□ -1.44
SCN1A-207ENST00000507401 STPG3Q8N7X2 389 aa6.04□□□□□ -1.44
SCN1A-207ENST00000507401 OR1L4Q8NGR5 311 aa6.04□□□□□ -1.44
SCN1A-207ENST00000507401 OR1L8Q8NGR8 309 aa6.04□□□□□ -1.44
SCN1A-207ENST00000507401 OR11H2Q8NH07 326 aa6.04□□□□□ -1.44
SCN1A-207ENST00000507401 ENY2Q9NPA8 101 aa6.04□□□□□ -1.44
SCN1A-207ENST00000507401 NDUFA4L2Q9NRX3 87 aa6.04□□□□□ -1.44
SCN1A-207ENST00000507401 AP5S1Q9NUS5 200 aa6.04□□□□□ -1.44
SCN1A-207ENST00000507401 PGPEP1LA6NFU8 196 aa6.03□□□□□ -1.44
SCN1A-207ENST00000507401 MYOD1P15172 320 aa6.03□□□□□ -1.44
SCN1A-207ENST00000507401 SLAQ13239 276 aa6.03□□□□□ -1.44
SCN1A-207ENST00000507401 LINC00322Q6ZN03 302 aaPredicted RBP6.03□□□□□ -1.44
SCN1A-207ENST00000507401 GATD1Q8NB37 220 aa6.03□□□□□ -1.44
SCN1A-207ENST00000507401 NUP35Q8NFH5 326 aa6.03□□□□□ -1.44
SCN1A-207ENST00000507401 ATP6V0E2Q8NHE4 81 aa6.03□□□□□ -1.44
SCN1A-207ENST00000507401 ZNF502Q8TBZ5 544 aa6.03□□□□□ -1.44
SCN1A-207ENST00000507401 CACNG8Q8WXS5 425 aa6.03□□□□□ -1.44
SCN1A-207ENST00000507401 CCDC140Q96MF4 163 aa6.03□□□□□ -1.44
SCN1A-207ENST00000507401 MRPL16Q9NX20 251 aaKnown RBP6.03□□□□□ -1.44
SCN1A-207ENST00000507401 PRNDQ9UKY0 176 aa6.03□□□□□ -1.44
SCN1A-207ENST00000507401 SPCS1Q9Y6A9 102 aa6.03□□□□□ -1.44
SCN1A-207ENST00000507401 TRAV25A0A0B4J276 109 aa6.02□□□□□ -1.45
SCN1A-207ENST00000507401 IGHV1-24A0A0C4DH33 117 aa6.02□□□□□ -1.45
SCN1A-207ENST00000507401 IGLV2-8P01709 118 aa6.02□□□□□ -1.45
SCN1A-207ENST00000507401 SMIM13P0DJ93 91 aa6.02□□□□□ -1.45
SCN1A-207ENST00000507401 AZU1P20160 251 aa6.02□□□□□ -1.45
SCN1A-207ENST00000507401 G6PCP35575 357 aa6.02□□□□□ -1.45
SCN1A-207ENST00000507401 RPL24P83731 157 aaKnown RBP6.02□□□□□ -1.45
SCN1A-207ENST00000507401 WT1-ASQ06250 92 aa6.02□□□□□ -1.45
SCN1A-207ENST00000507401 TAL2Q16559 108 aa6.02□□□□□ -1.45
SCN1A-207ENST00000507401 MIC13Q5XKP0 118 aa6.02□□□□□ -1.45
SCN1A-207ENST00000507401 RBPMS2Q6ZRY4 209 aaKnown RBP6.02□□□□□ -1.45
SCN1A-207ENST00000507401 ATOH7Q8N100 152 aa6.02□□□□□ -1.45
SCN1A-207ENST00000507401 MUC7Q8TAX7 377 aa6.02□□□□□ -1.45
SCN1A-207ENST00000507401 DYNLRB2Q8TF09 96 aa6.02□□□□□ -1.45
SCN1A-207ENST00000507401 KLF12Q9Y4X4 402 aa6.02□□□□□ -1.45
SCN1A-207ENST00000507401 F11RQ9Y624 299 aaKnown RBP6.02□□□□□ -1.45
SCN1A-207ENST00000507401 TRBV6-1A0A0K0K1D8 114 aa6.01□□□□□ -1.45
SCN1A-207ENST00000507401 TMEM213A2RRL7 107 aa6.01□□□□□ -1.45
SCN1A-207ENST00000507401 GAGE12HA6NDE8 117 aa6.01□□□□□ -1.45
SCN1A-207ENST00000507401 INS-IGF2F8WCM5 200 aa6.01□□□□□ -1.45
SCN1A-207ENST00000507401 IGHV3-23P01764 117 aa6.01□□□□□ -1.45
SCN1A-207ENST00000507401 MGST1P10620 155 aaKnown RBP6.01□□□□□ -1.45
SCN1A-207ENST00000507401 FOXA3P55318 350 aaPredicted RBP6.01□□□□□ -1.45
SCN1A-207ENST00000507401 TCTAP57738 103 aa6.01□□□□□ -1.45
SCN1A-207ENST00000507401 CKS1BP61024 79 aa6.01□□□□□ -1.45
SCN1A-207ENST00000507401 HSPE1P61604 102 aaKnown RBP6.01□□□□□ -1.45
SCN1A-207ENST00000507401 IZUMO4Q1ZYL8 232 aa6.01□□□□□ -1.45
SCN1A-207ENST00000507401 KIAA1644Q3SXP7 199 aa6.01□□□□□ -1.45
SCN1A-207ENST00000507401 CASC10Q5T4H9 136 aa6.01□□□□□ -1.45
SCN1A-207ENST00000507401 C2orf91Q6ZV80 131 aa6.01□□□□□ -1.45
SCN1A-207ENST00000507401 FMC1Q96HJ9 113 aa6.01□□□□□ -1.45
SCN1A-207ENST00000507401 VGLL1Q99990 258 aa6.01□□□□□ -1.45
SCN1A-207ENST00000507401 RNASE7Q9H1E1 156 aaKnown RBP6.01□□□□□ -1.45
SCN1A-207ENST00000507401 TMEM14BQ9NUH8 114 aa6.01□□□□□ -1.45
SCN1A-207ENST00000507401 UFC1Q9Y3C8 167 aa6.01□□□□□ -1.45
SCN1A-207ENST00000507401 LOC102724200A0A096LPH7 203 aaPredicted RBP6□□□□□ -1.45
SCN1A-207ENST00000507401 C15orf61A6NNL5 157 aa6□□□□□ -1.45
SCN1A-207ENST00000507401 HIGD1CA8MV81 97 aa6□□□□□ -1.45
SCN1A-207ENST00000507401 K7EMT4 169 aa6□□□□□ -1.45
SCN1A-207ENST00000507401 PEX7O00628 323 aa6□□□□□ -1.45
SCN1A-207ENST00000507401 CHEK1O14757 476 aa6□□□□□ -1.45
SCN1A-207ENST00000507401 FCGR2BP31994 310 aaPredicted RBP6□□□□□ -1.45
SCN1A-207ENST00000507401 SUB1P53999 127 aaKnown RBP eCLIP6□□□□□ -1.45
SCN1A-207ENST00000507401 RIGQ13278 110 aa6□□□□□ -1.45
SCN1A-207ENST00000507401 LYRM7Q5U5X0 104 aa6□□□□□ -1.45
SCN1A-207ENST00000507401 GPR82Q96P67 336 aa6□□□□□ -1.45
SCN1A-207ENST00000507401 HINT2Q9BX68 163 aa6□□□□□ -1.45
SCN1A-207ENST00000507401 SPANXDQ9BXN6 97 aa6□□□□□ -1.45
SCN1A-207ENST00000507401 RPP21Q9H633 154 aaKnown RBP6□□□□□ -1.45
SCN1A-207ENST00000507401 EDA2RQ9HAV5 297 aa6□□□□□ -1.45
SCN1A-207ENST00000507401 C21orf62Q9NYP8 219 aa6□□□□□ -1.45
SCN1A-207ENST00000507401 S4R3C0 116 aa6□□□□□ -1.45
SCN1A-207ENST00000507401 DNAH7Q8WXX0 4024 aa6□□□□□ -1.45
SCN1A-207ENST00000507401 FBLL1A6NHQ2 334 aaKnown RBP5.99□□□□□ -1.45
SCN1A-207ENST00000507401 H3BUT2 72 aa5.99□□□□□ -1.45
SCN1A-207ENST00000507401 NDUFA4O00483 81 aa5.99□□□□□ -1.45
SCN1A-207ENST00000507401 CTSGP08311 255 aa5.99□□□□□ -1.45
SCN1A-207ENST00000507401 CD7P09564 240 aa5.99□□□□□ -1.45
SCN1A-207ENST00000507401 EDN2P20800 178 aa5.99□□□□□ -1.45
SCN1A-207ENST00000507401 ERHP84090 104 aaKnown RBP5.99□□□□□ -1.45
SCN1A-207ENST00000507401 PRCDQ00LT1 54 aa5.99□□□□□ -1.45
SCN1A-207ENST00000507401 TM4SF20Q53R12 229 aa5.99□□□□□ -1.45
SCN1A-207ENST00000507401 C2orf83Q53S99 150 aa5.99□□□□□ -1.45
SCN1A-207ENST00000507401 GCSAMLQ5JQS6 135 aa5.99□□□□□ -1.45
SCN1A-207ENST00000507401 UNQ9165/PRO28630Q6UXU0 137 aa5.99□□□□□ -1.45
SCN1A-207ENST00000507401 Q6ZVH6 145 aa5.99□□□□□ -1.45
SCN1A-207ENST00000507401 TMEM61Q8N0U2 210 aa5.99□□□□□ -1.45
SCN1A-207ENST00000507401 DAZAP1Q96EP5 407 aaKnown RBP5.99□□□□□ -1.45
SCN1A-207ENST00000507401 FNDC4Q9H6D8 234 aaPredicted RBP5.99□□□□□ -1.45
SCN1A-207ENST00000507401 CYSLTR1Q9Y271 337 aa5.99□□□□□ -1.45
SCN1A-207ENST00000507401 RYR3Q15413 4870 aa5.99□□□□□ -1.45
SCN1A-207ENST00000507401 A0A087X0K7 114 aa5.98□□□□□ -1.45
SCN1A-207ENST00000507401 RBMY1BA6NDE4 496 aaKnown RBP5.98□□□□□ -1.45
SCN1A-207ENST00000507401 RBMY1EA6NEQ0 496 aaKnown RBP5.98□□□□□ -1.45
SCN1A-207ENST00000507401 GGTLC3B5MD39 225 aa5.98□□□□□ -1.45
SCN1A-207ENST00000507401 K7EIM0 57 aa5.98□□□□□ -1.45
SCN1A-207ENST00000507401 K7EQM0 130 aa5.98□□□□□ -1.45
SCN1A-207ENST00000507401 GNG7O60262 68 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms