RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 ARMS2P0C7Q2 107 aa17.57■□□□□ 0.4
LSM6-202ENST00000502781 RPL19P84098 196 aaKnown RBP17.57■□□□□ 0.4
LSM6-202ENST00000502781 ZNF479Q96JC4 524 aa17.57■□□□□ 0.4
LSM6-202ENST00000502781 BIN3Q9NQY0 253 aa17.57■□□□□ 0.4
LSM6-202ENST00000502781 TRAV26-1A0A087WT03 109 aa17.56■□□□□ 0.4
LSM6-202ENST00000502781 H3BNG1 76 aa17.56■□□□□ 0.4
LSM6-202ENST00000502781 IGHV3-53P01767 116 aa17.56■□□□□ 0.4
LSM6-202ENST00000502781 IFITM2Q01629 132 aa17.56■□□□□ 0.4
LSM6-202ENST00000502781 FHL2Q14192 279 aa17.56■□□□□ 0.4
LSM6-202ENST00000502781 OCC1Q8TAD7 63 aa17.56■□□□□ 0.4
LSM6-202ENST00000502781 MED14OSP0DP75 135 aa17.55■□□□□ 0.4
LSM6-202ENST00000502781 RYR2Q92736 4967 aa17.55■□□□□ 0.4
LSM6-202ENST00000502781 K7EN84 100 aa17.54■□□□□ 0.4
LSM6-202ENST00000502781 SFTA3P0C7M3 94 aa17.54■□□□□ 0.4
LSM6-202ENST00000502781 VSIG2Q96IQ7 327 aa17.54■□□□□ 0.4
LSM6-202ENST00000502781 SMDT1Q9H4I9 107 aa17.54■□□□□ 0.4
LSM6-202ENST00000502781 C9JQL5 133 aa17.53■□□□□ 0.4
LSM6-202ENST00000502781 RS1O15537 224 aa17.53■□□□□ 0.4
LSM6-202ENST00000502781 SRSF3P84103 164 aaKnown RBP17.53■□□□□ 0.4
LSM6-202ENST00000502781 OR4C5Q8NGB2 326 aa17.53■□□□□ 0.4
LSM6-202ENST00000502781 DAZAP1Q96EP5 407 aaKnown RBP17.53■□□□□ 0.4
LSM6-202ENST00000502781 LY96Q9Y6Y9 160 aa17.53■□□□□ 0.4
LSM6-202ENST00000502781 LY6G6CO95867 125 aa17.53■□□□□ 0.4
LSM6-202ENST00000502781 CEBPGP53567 150 aa17.53■□□□□ 0.4
LSM6-202ENST00000502781 SLAQ13239 276 aa17.53■□□□□ 0.4
LSM6-202ENST00000502781 CFAP126Q5VTH2 177 aa17.53■□□□□ 0.4
LSM6-202ENST00000502781 SMIM7Q9BQ49 75 aa17.53■□□□□ 0.4
LSM6-202ENST00000502781 SSBP4Q9BWG4 385 aaPredicted RBP17.53■□□□□ 0.4
LSM6-202ENST00000502781 PRO0255Q9UI72 69 aa17.53■□□□□ 0.4
LSM6-202ENST00000502781 VPS13DQ5THJ4 4388 aa17.52■□□□□ 0.4
LSM6-202ENST00000502781 A0A0J9YY99 117 aa17.52■□□□□ 0.39
LSM6-202ENST00000502781 RAB14P61106 215 aa17.52■□□□□ 0.39
LSM6-202ENST00000502781 RYR3Q15413 4870 aa17.51■□□□□ 0.39
LSM6-202ENST00000502781 SNAI2O43623 268 aa17.51■□□□□ 0.39
LSM6-202ENST00000502781 CIDEAO60543 219 aa17.51■□□□□ 0.39
LSM6-202ENST00000502781 CRYBA4P53673 196 aa17.51■□□□□ 0.39
LSM6-202ENST00000502781 PEA15Q15121 130 aa17.51■□□□□ 0.39
LSM6-202ENST00000502781 CLLU1Q5K131 121 aa17.51■□□□□ 0.39
LSM6-202ENST00000502781 DMRTA1Q5VZB9 504 aa17.51■□□□□ 0.39
LSM6-202ENST00000502781 P01737 135 aa17.5■□□□□ 0.39
LSM6-202ENST00000502781 P0DMU3 169 aa17.5■□□□□ 0.39
LSM6-202ENST00000502781 FAM231AP0DMU4 169 aa17.5■□□□□ 0.39
LSM6-202ENST00000502781 FAM231CP0DMU5 169 aa17.5■□□□□ 0.39
LSM6-202ENST00000502781 NUDT10Q8NFP7 164 aa17.5■□□□□ 0.39
LSM6-202ENST00000502781 OR2D3Q8NGH3 330 aa17.5■□□□□ 0.39
LSM6-202ENST00000502781 NUDT11Q96G61 164 aa17.5■□□□□ 0.39
LSM6-202ENST00000502781 HHLA3Q9XRX5 114 aa17.5■□□□□ 0.39
LSM6-202ENST00000502781 PHLDA3Q9Y5J5 127 aa17.5■□□□□ 0.39
LSM6-202ENST00000502781 NACAE9PAV3 2078 aa17.49■□□□□ 0.39
LSM6-202ENST00000502781 TRGV4A0A0C4DH28 118 aa17.49■□□□□ 0.39
LSM6-202ENST00000502781 ZNF727A8MUV8 499 aa17.49■□□□□ 0.39
LSM6-202ENST00000502781 OR5AL1P0C617 328 aa17.49■□□□□ 0.39
LSM6-202ENST00000502781 RPS20P60866 119 aaKnown RBP17.49■□□□□ 0.39
LSM6-202ENST00000502781 A8MWV9 139 aa17.48■□□□□ 0.39
LSM6-202ENST00000502781 NXPH4O95158 308 aa17.48■□□□□ 0.39
LSM6-202ENST00000502781 NUDT3O95989 172 aa17.48■□□□□ 0.39
LSM6-202ENST00000502781 IGLC6P0CF74 106 aa17.48■□□□□ 0.39
LSM6-202ENST00000502781 SYT8Q8NBV8 401 aa17.48■□□□□ 0.39
LSM6-202ENST00000502781 HYDINQ4G0P3 5121 aa17.48■□□□□ 0.39
LSM6-202ENST00000502781 PAX4O43316 350 aa17.47■□□□□ 0.39
LSM6-202ENST00000502781 FAM74A3Q4VXF1 159 aa17.47■□□□□ 0.39
LSM6-202ENST00000502781 LINC01551Q86U37 167 aa17.47■□□□□ 0.39
LSM6-202ENST00000502781 ZFP82Q8N141 532 aa17.47■□□□□ 0.39
LSM6-202ENST00000502781 GATA1P15976 413 aaPredicted RBP17.46■□□□□ 0.39
LSM6-202ENST00000502781 UFSP1Q6NVU6 142 aa17.46■□□□□ 0.39
LSM6-202ENST00000502781 ZFP2Q6ZN57 461 aa17.46■□□□□ 0.39
LSM6-202ENST00000502781 FAM231DQ6ZW35 169 aa17.46■□□□□ 0.39
LSM6-202ENST00000502781 OR10AG1Q8NH19 301 aa17.46■□□□□ 0.39
LSM6-202ENST00000502781 RNASE7Q9H1E1 156 aaKnown RBP17.46■□□□□ 0.39
LSM6-202ENST00000502781 JPT2Q9H910 190 aa17.46■□□□□ 0.39
LSM6-202ENST00000502781 RNF212Q495C1 297 aa17.45■□□□□ 0.38
LSM6-202ENST00000502781 A0A096LPF7 62 aa17.44■□□□□ 0.38
LSM6-202ENST00000502781 XKRY2A2RUG3 117 aa17.44■□□□□ 0.38
LSM6-202ENST00000502781 M0R381 172 aa17.44■□□□□ 0.38
LSM6-202ENST00000502781 GZMBP10144 247 aa17.44■□□□□ 0.38
LSM6-202ENST00000502781 SFRP2Q96HF1 295 aa17.44■□□□□ 0.38
LSM6-202ENST00000502781 SAMD10Q9BYL1 202 aa17.43■□□□□ 0.38
LSM6-202ENST00000502781 RPP21Q9H633 154 aaKnown RBP17.43■□□□□ 0.38
LSM6-202ENST00000502781 FER1L6-AS1Q8NA97 138 aa17.42■□□□□ 0.38
LSM6-202ENST00000502781 CRYGDP07320 174 aa17.41■□□□□ 0.38
LSM6-202ENST00000502781 TMEM241Q24JQ0 296 aa17.41■□□□□ 0.38
LSM6-202ENST00000502781 ICOSQ9Y6W8 199 aa17.41■□□□□ 0.38
LSM6-202ENST00000502781 IGHV3-73A0A0B4J1V6 119 aa17.4■□□□□ 0.38
LSM6-202ENST00000502781 TRBV6-4A0A1B0GX49 114 aa17.4■□□□□ 0.38
LSM6-202ENST00000502781 SLC25A29Q8N8R3 303 aa17.4■□□□□ 0.38
LSM6-202ENST00000502781 KMT2AQ03164 3969 aa17.4■□□□□ 0.38
LSM6-202ENST00000502781 A0A1W2PPQ1 181 aa17.4■□□□□ 0.38
LSM6-202ENST00000502781 RHODO00212 210 aa17.4■□□□□ 0.38
LSM6-202ENST00000502781 MRPL23Q16540 153 aaKnown RBP17.4■□□□□ 0.38
LSM6-202ENST00000502781 NAT8Q9UHE5 227 aa17.4■□□□□ 0.38
LSM6-202ENST00000502781 MUC21A0A0G2JKD1 596 aa17.39■□□□□ 0.37
LSM6-202ENST00000502781 MUC21A0A140T8X8 626 aa17.39■□□□□ 0.37
LSM6-202ENST00000502781 F2Z2F3 143 aa17.39■□□□□ 0.37
LSM6-202ENST00000502781 K7EQD1 137 aa17.39■□□□□ 0.37
LSM6-202ENST00000502781 FAM3BP58499 235 aaPredicted RBP17.39■□□□□ 0.37
LSM6-202ENST00000502781 CT83Q5H943 113 aa17.39■□□□□ 0.37
LSM6-202ENST00000502781 SOHLH1Q5JUK2 328 aa17.39■□□□□ 0.37
LSM6-202ENST00000502781 SPANXN1Q5VSR9 72 aa17.39■□□□□ 0.37
LSM6-202ENST00000502781 GATCO43716 136 aaKnown RBP17.38■□□□□ 0.37
LSM6-202ENST00000502781 GYPEP15421 78 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms