RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 CRYBA4P53673 196 aa11□□□□□ -0.65
VIM-208ENST00000497849 SUMO1P63165 101 aaKnown RBP11□□□□□ -0.65
VIM-208ENST00000497849 MEF2BQ02080 365 aaPredicted RBP11□□□□□ -0.65
VIM-208ENST00000497849 MRPL23Q16540 153 aaKnown RBP11□□□□□ -0.65
VIM-208ENST00000497849 NEGR1Q7Z3B1 354 aa11□□□□□ -0.65
VIM-208ENST00000497849 TXNDC17Q9BRA2 123 aa11□□□□□ -0.65
VIM-208ENST00000497849 PRO0255Q9UI72 69 aa11□□□□□ -0.65
VIM-208ENST00000497849 PRELID1Q9Y255 219 aa11□□□□□ -0.65
VIM-208ENST00000497849 LRP2P98164 4655 aa10.99□□□□□ -0.65
VIM-208ENST00000497849 A0A1W2PRE2 83 aa10.99□□□□□ -0.65
VIM-208ENST00000497849 SPINK4O60575 86 aa10.99□□□□□ -0.65
VIM-208ENST00000497849 SLC25A5P05141 298 aaKnown RBP10.99□□□□□ -0.65
VIM-208ENST00000497849 CRYGDP07320 174 aa10.99□□□□□ -0.65
VIM-208ENST00000497849 CT45A10P0DMU9 189 aa10.99□□□□□ -0.65
VIM-208ENST00000497849 VGLL1Q99990 258 aa10.99□□□□□ -0.65
VIM-208ENST00000497849 KLF12Q9Y4X4 402 aa10.99□□□□□ -0.65
VIM-208ENST00000497849 PKHD1L1Q86WI1 4243 aa10.98□□□□□ -0.65
VIM-208ENST00000497849 GGTLC3B5MD39 225 aa10.98□□□□□ -0.65
VIM-208ENST00000497849 C9JQL5 133 aa10.98□□□□□ -0.65
VIM-208ENST00000497849 PSCAO43653 123 aa10.98□□□□□ -0.65
VIM-208ENST00000497849 NDUFS6O75380 124 aaKnown RBP10.98□□□□□ -0.65
VIM-208ENST00000497849 SRP19P09132 144 aaKnown RBP10.98□□□□□ -0.65
VIM-208ENST00000497849 FHL2Q14192 279 aa10.98□□□□□ -0.65
VIM-208ENST00000497849 MRPL53Q96EL3 112 aaKnown RBP10.98□□□□□ -0.65
VIM-208ENST00000497849 C8orf49Q96NF6 230 aa10.98□□□□□ -0.65
VIM-208ENST00000497849 NKX6-2Q9C056 277 aaPredicted RBP10.98□□□□□ -0.65
VIM-208ENST00000497849 AGPAT4-IT1Q9H0P7 198 aa10.98□□□□□ -0.65
VIM-208ENST00000497849 HHLA3Q9XRX5 114 aa10.98□□□□□ -0.65
VIM-208ENST00000497849 TMEM218A2RU14 115 aa10.97□□□□□ -0.65
VIM-208ENST00000497849 DIRC3C9JPN6 131 aa10.97□□□□□ -0.65
VIM-208ENST00000497849 F6UZH7 168 aa10.97□□□□□ -0.65
VIM-208ENST00000497849 PDE6DO43924 150 aa10.97□□□□□ -0.65
VIM-208ENST00000497849 CSN1S1P47710 185 aa10.97□□□□□ -0.65
VIM-208ENST00000497849 C10orf126Q8N4M7 172 aa10.97□□□□□ -0.65
VIM-208ENST00000497849 CMTM2Q8TAZ6 248 aa10.97□□□□□ -0.65
VIM-208ENST00000497849 SGK494Q96LW2 274 aa10.97□□□□□ -0.65
VIM-208ENST00000497849 KRBOX1C9JBD0 128 aa10.96□□□□□ -0.65
VIM-208ENST00000497849 TMEM250H0YL14 139 aa10.96□□□□□ -0.65
VIM-208ENST00000497849 K7EQD1 137 aa10.96□□□□□ -0.65
VIM-208ENST00000497849 SFTA3P0C7M3 94 aa10.96□□□□□ -0.65
VIM-208ENST00000497849 S100A1P23297 94 aa10.96□□□□□ -0.65
VIM-208ENST00000497849 LEPP41159 167 aa10.96□□□□□ -0.65
VIM-208ENST00000497849 GOLT1AQ6ZVE7 132 aa10.96□□□□□ -0.65
VIM-208ENST00000497849 ODF3Q96PU9 254 aa10.96□□□□□ -0.65
VIM-208ENST00000497849 CEBPGP53567 150 aa10.95□□□□□ -0.66
VIM-208ENST00000497849 TCL1AP56279 114 aa10.95□□□□□ -0.66
VIM-208ENST00000497849 SLAQ13239 276 aa10.95□□□□□ -0.66
VIM-208ENST00000497849 ANXA2RQ3ZCQ2 193 aa10.95□□□□□ -0.66
VIM-208ENST00000497849 CYB561D1Q8N8Q1 229 aa10.95□□□□□ -0.66
VIM-208ENST00000497849 EPDR1Q9UM22 224 aa10.95□□□□□ -0.66
VIM-208ENST00000497849 TRAV8-1A0A0A6YYK1 113 aa10.94□□□□□ -0.66
VIM-208ENST00000497849 F8W036 122 aa10.94□□□□□ -0.66
VIM-208ENST00000497849 SRIP30626 198 aa10.94□□□□□ -0.66
VIM-208ENST00000497849 C5orf17Q8NAS9 161 aa10.94□□□□□ -0.66
VIM-208ENST00000497849 Q8TAT8 98 aa10.94□□□□□ -0.66
VIM-208ENST00000497849 LINC00479Q96M42 142 aa10.94□□□□□ -0.66
VIM-208ENST00000497849 TCEAL7Q9BRU2 100 aa10.94□□□□□ -0.66
VIM-208ENST00000497849 MRPL16Q9NX20 251 aaKnown RBP10.94□□□□□ -0.66
VIM-208ENST00000497849 TRAV34A0A0B4J273 112 aa10.93□□□□□ -0.66
VIM-208ENST00000497849 TCRAP04437 139 aa10.93□□□□□ -0.66
VIM-208ENST00000497849 C9orf47Q6ZRZ4 202 aa10.93□□□□□ -0.66
VIM-208ENST00000497849 SCXQ7RTU7 201 aa10.93□□□□□ -0.66
VIM-208ENST00000497849 LINC00477Q96M19 166 aa10.93□□□□□ -0.66
VIM-208ENST00000497849 SCO2A0A1W2PP80 73 aa10.92□□□□□ -0.66
VIM-208ENST00000497849 C7orf71A4D174 169 aa10.92□□□□□ -0.66
VIM-208ENST00000497849 WFDC2Q14508 124 aa10.92□□□□□ -0.66
VIM-208ENST00000497849 C11orf52Q96A22 123 aa10.92□□□□□ -0.66
VIM-208ENST00000497849 SEC11CQ9BY50 192 aa10.92□□□□□ -0.66
VIM-208ENST00000497849 TP53TG3Q9ULZ0 132 aa10.92□□□□□ -0.66
VIM-208ENST00000497849 IBA57-AS1B1ANH7 110 aa10.91□□□□□ -0.66
VIM-208ENST00000497849 KLLNB2CW77 178 aa10.91□□□□□ -0.66
VIM-208ENST00000497849 PEX7O00628 323 aa10.91□□□□□ -0.66
VIM-208ENST00000497849 ZNF138P52744 262 aa10.91□□□□□ -0.66
VIM-208ENST00000497849 BTN1A1Q13410 526 aa10.91□□□□□ -0.66
VIM-208ENST00000497849 IBA57Q5T440 356 aaKnown RBP10.91□□□□□ -0.66
VIM-208ENST00000497849 TMEM78Q5T7P6 136 aa10.91□□□□□ -0.66
VIM-208ENST00000497849 HIST1H2BAQ96A08 127 aa10.91□□□□□ -0.66
VIM-208ENST00000497849 TVP23CQ96ET8 276 aa10.91□□□□□ -0.66
VIM-208ENST00000497849 ZNF492Q9P255 531 aa10.91□□□□□ -0.66
VIM-208ENST00000497849 RBAKDNA6NC62 111 aa10.9□□□□□ -0.66
VIM-208ENST00000497849 IGLV2-11P01706 119 aa10.9□□□□□ -0.66
VIM-208ENST00000497849 GYPEP15421 78 aa10.9□□□□□ -0.66
VIM-208ENST00000497849 ADCYAP1P18509 176 aa10.9□□□□□ -0.66
VIM-208ENST00000497849 ZNF415Q09FC8 603 aa10.9□□□□□ -0.66
VIM-208ENST00000497849 ZNF674Q2M3X9 581 aa10.9□□□□□ -0.66
VIM-208ENST00000497849 FAM74A3Q4VXF1 159 aa10.9□□□□□ -0.66
VIM-208ENST00000497849 C10orf91Q5T1B1 145 aa10.9□□□□□ -0.66
VIM-208ENST00000497849 PRR9Q5T870 116 aa10.9□□□□□ -0.66
VIM-208ENST00000497849 Q6ZQT7 251 aa10.9□□□□□ -0.66
VIM-208ENST00000497849 FAM19A4Q96LR4 140 aa10.9□□□□□ -0.66
VIM-208ENST00000497849 PARLQ9H300 379 aa10.9□□□□□ -0.66
VIM-208ENST00000497849 Q9HAA7 133 aa10.9□□□□□ -0.66
VIM-208ENST00000497849 PSG8Q9UQ74 426 aa10.9□□□□□ -0.66
VIM-208ENST00000497849 CARHSP1Q9Y2V2 147 aaKnown RBP10.9□□□□□ -0.66
VIM-208ENST00000497849 IGHV3-38A0A0C4DH36 116 aa10.89□□□□□ -0.67
VIM-208ENST00000497849 ZNF727A8MUV8 499 aa10.89□□□□□ -0.67
VIM-208ENST00000497849 AKR1C3P42330 323 aa10.89□□□□□ -0.67
VIM-208ENST00000497849 PRNTQ86SH4 94 aa10.89□□□□□ -0.67
VIM-208ENST00000497849 ARL6IP6Q8N6S5 226 aa10.89□□□□□ -0.67
VIM-208ENST00000497849 SMIM7Q9BQ49 75 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms