RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 KCNS1Q96KK3 526 aa5.36□□□□□ -1.55
USP39-216ENST00000490193 SH3BGRL3Q9H299 93 aa5.36□□□□□ -1.55
USP39-216ENST00000490193 TRAV21A0A0B4J279 112 aa5.35□□□□□ -1.55
USP39-216ENST00000490193 PGPEP1LA6NFU8 196 aa5.35□□□□□ -1.55
USP39-216ENST00000490193 CENPXA8MT69 81 aa5.35□□□□□ -1.55
USP39-216ENST00000490193 IGLV2-11P01706 119 aa5.35□□□□□ -1.55
USP39-216ENST00000490193 LINC00694P0DN24 101 aa5.35□□□□□ -1.55
USP39-216ENST00000490193 MGST1P10620 155 aaKnown RBP5.35□□□□□ -1.55
USP39-216ENST00000490193 INPP1P49441 399 aa5.35□□□□□ -1.55
USP39-216ENST00000490193 RANP62826 216 aaKnown RBP5.35□□□□□ -1.55
USP39-216ENST00000490193 ZNF876PQ49A33 203 aa5.35□□□□□ -1.55
USP39-216ENST00000490193 SPANXN2Q5MJ10 180 aa5.35□□□□□ -1.55
USP39-216ENST00000490193 CFAP126Q5VTH2 177 aa5.35□□□□□ -1.55
USP39-216ENST00000490193 TRIQKQ629K1 86 aa5.35□□□□□ -1.55
USP39-216ENST00000490193 Q8N976 141 aa5.35□□□□□ -1.55
USP39-216ENST00000490193 PTH2Q96A98 100 aa5.35□□□□□ -1.55
USP39-216ENST00000490193 C2orf50Q96LR7 162 aa5.35□□□□□ -1.55
USP39-216ENST00000490193 ATP5SQ99766 215 aa5.35□□□□□ -1.55
USP39-216ENST00000490193 SDF2L1Q9HCN8 221 aa5.35□□□□□ -1.55
USP39-216ENST00000490193 KCNIP2Q9NS61 270 aa5.35□□□□□ -1.55
USP39-216ENST00000490193 NAGKQ9UJ70 344 aa5.35□□□□□ -1.55
USP39-216ENST00000490193 RBFOX3A6NFN3 312 aa5.34□□□□□ -1.55
USP39-216ENST00000490193 GGTLC3B5MD39 225 aa5.34□□□□□ -1.55
USP39-216ENST00000490193 PCP4P48539 62 aa5.34□□□□□ -1.55
USP39-216ENST00000490193 RAB32Q13637 225 aa5.34□□□□□ -1.55
USP39-216ENST00000490193 DPPA3Q6W0C5 159 aa5.34□□□□□ -1.55
USP39-216ENST00000490193 DAZ4Q86SG3 579 aaKnown RBP5.34□□□□□ -1.55
USP39-216ENST00000490193 BAALCQ8WXS3 180 aa5.34□□□□□ -1.55
USP39-216ENST00000490193 RMI2Q96E14 147 aa5.34□□□□□ -1.55
USP39-216ENST00000490193 SDHCQ99643 169 aaPredicted RBP5.34□□□□□ -1.55
USP39-216ENST00000490193 DAZ3Q9NR90 486 aaKnown RBP5.34□□□□□ -1.55
USP39-216ENST00000490193 LRP2P98164 4655 aa5.33□□□□□ -1.56
USP39-216ENST00000490193 C5orf51A6NDU8 294 aa5.33□□□□□ -1.56
USP39-216ENST00000490193 OR7C2O60412 319 aa5.33□□□□□ -1.56
USP39-216ENST00000490193 MT1HL1P0DM35 61 aa5.33□□□□□ -1.56
USP39-216ENST00000490193 HNRNPA3P51991 378 aaKnown RBP5.33□□□□□ -1.56
USP39-216ENST00000490193 S100A10P60903 97 aa5.33□□□□□ -1.56
USP39-216ENST00000490193 RPL37AP61513 92 aaKnown RBP5.33□□□□□ -1.56
USP39-216ENST00000490193 UBE2L3P68036 154 aaKnown RBP5.33□□□□□ -1.56
USP39-216ENST00000490193 AKAP14Q86UN6 197 aa5.33□□□□□ -1.56
USP39-216ENST00000490193 THAP6Q8TBB0 222 aa5.33□□□□□ -1.56
USP39-216ENST00000490193 ASB13Q8WXK3 278 aa5.33□□□□□ -1.56
USP39-216ENST00000490193 TVP23CQ96ET8 276 aa5.33□□□□□ -1.56
USP39-216ENST00000490193 C9orf85Q96MD7 179 aa5.33□□□□□ -1.56
USP39-216ENST00000490193 OTORQ9NRC9 128 aa5.33□□□□□ -1.56
USP39-216ENST00000490193 A0A087WWC5 75 aa5.32□□□□□ -1.56
USP39-216ENST00000490193 TRAV8-1A0A0A6YYK1 113 aa5.32□□□□□ -1.56
USP39-216ENST00000490193 SEC11BP0C7V7 166 aa5.32□□□□□ -1.56
USP39-216ENST00000490193 NHLH2Q02577 135 aa5.32□□□□□ -1.56
USP39-216ENST00000490193 KHDC3LQ587J8 217 aa5.32□□□□□ -1.56
USP39-216ENST00000490193 PIK3CD-AS1Q5SR53 167 aa5.32□□□□□ -1.56
USP39-216ENST00000490193 ATRAIDQ6UW56 229 aa5.32□□□□□ -1.56
USP39-216ENST00000490193 ZFP2Q6ZN57 461 aa5.32□□□□□ -1.56
USP39-216ENST00000490193 SLC51BQ86UW2 128 aa5.32□□□□□ -1.56
USP39-216ENST00000490193 OR5C1Q8NGR4 320 aa5.32□□□□□ -1.56
USP39-216ENST00000490193 ENKURQ8TC29 256 aa5.32□□□□□ -1.56
USP39-216ENST00000490193 DAZAP1Q96EP5 407 aaKnown RBP5.32□□□□□ -1.56
USP39-216ENST00000490193 WDR61Q9GZS3 305 aaKnown RBP5.32□□□□□ -1.56
USP39-216ENST00000490193 IGHV3-73A0A0B4J1V6 119 aa5.31□□□□□ -1.56
USP39-216ENST00000490193 F6UZH7 168 aa5.31□□□□□ -1.56
USP39-216ENST00000490193 TCRBP04435 133 aa5.31□□□□□ -1.56
USP39-216ENST00000490193 IL7P13232 177 aa5.31□□□□□ -1.56
USP39-216ENST00000490193 TAGLN2P37802 199 aaKnown RBP5.31□□□□□ -1.56
USP39-216ENST00000490193 TAS2R45P59539 299 aa5.31□□□□□ -1.56
USP39-216ENST00000490193 ZNF506Q5JVG8 444 aa5.31□□□□□ -1.56
USP39-216ENST00000490193 FAM74A1Q5RGS3 127 aa5.31□□□□□ -1.56
USP39-216ENST00000490193 GOLT1AQ6ZVE7 132 aa5.31□□□□□ -1.56
USP39-216ENST00000490193 NIT1Q86X76 327 aa5.31□□□□□ -1.56
USP39-216ENST00000490193 CYB561D1Q8N8Q1 229 aa5.31□□□□□ -1.56
USP39-216ENST00000490193 OR10G9Q8NGN4 311 aa5.31□□□□□ -1.56
USP39-216ENST00000490193 CMTM2Q8TAZ6 248 aa5.31□□□□□ -1.56
USP39-216ENST00000490193 SEC22CQ9BRL7 303 aa5.31□□□□□ -1.56
USP39-216ENST00000490193 CHCHD7Q9BUK0 85 aa5.31□□□□□ -1.56
USP39-216ENST00000490193 TREM1Q9NP99 234 aa5.31□□□□□ -1.56
USP39-216ENST00000490193 C11orf21Q9P2W6 132 aa5.31□□□□□ -1.56
USP39-216ENST00000490193 TNXBP22105 4242 aa5.3□□□□□ -1.56
USP39-216ENST00000490193 IGKV2D-24A0A075B6R9 120 aa5.3□□□□□ -1.56
USP39-216ENST00000490193 PGPA6NDG6 321 aa5.3□□□□□ -1.56
USP39-216ENST00000490193 HSBP1L1C9JCN9 74 aa5.3□□□□□ -1.56
USP39-216ENST00000490193 C17orf112F2Z3M2 114 aa5.3□□□□□ -1.56
USP39-216ENST00000490193 PLA2G10O15496 165 aa5.3□□□□□ -1.56
USP39-216ENST00000490193 RNASE3P12724 160 aaKnown RBP5.3□□□□□ -1.56
USP39-216ENST00000490193 C14orf177Q52M58 125 aa5.3□□□□□ -1.56
USP39-216ENST00000490193 DNAJC30Q96LL9 226 aa5.3□□□□□ -1.56
USP39-216ENST00000490193 HYLS1Q96M11 299 aa5.3□□□□□ -1.56
USP39-216ENST00000490193 LINC00479Q96M42 142 aa5.3□□□□□ -1.56
USP39-216ENST00000490193 PARLQ9H300 379 aa5.3□□□□□ -1.56
USP39-216ENST00000490193 SERTM2A0A1B0GWG4 89 aa5.29□□□□□ -1.56
USP39-216ENST00000490193 GAGE12JA6NER3 117 aa5.29□□□□□ -1.56
USP39-216ENST00000490193 A8MWV9 139 aa5.29□□□□□ -1.56
USP39-216ENST00000490193 TAAR5O14804 337 aa5.29□□□□□ -1.56
USP39-216ENST00000490193 LYRM1O43325 122 aa5.29□□□□□ -1.56
USP39-216ENST00000490193 ZNF80P51504 273 aaPredicted RBP5.29□□□□□ -1.56
USP39-216ENST00000490193 FGF8P55075 233 aaPredicted RBP5.29□□□□□ -1.56
USP39-216ENST00000490193 GAGE1Q13065 139 aa5.29□□□□□ -1.56
USP39-216ENST00000490193 GAGE4Q13068 117 aa5.29□□□□□ -1.56
USP39-216ENST00000490193 GAGE5Q13069 117 aa5.29□□□□□ -1.56
USP39-216ENST00000490193 NDUFA5Q16718 116 aa5.29□□□□□ -1.56
USP39-216ENST00000490193 GAGE13Q4V321 117 aa5.29□□□□□ -1.56
USP39-216ENST00000490193 UFSP1Q6NVU6 142 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms