RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 NUDT11Q96G61 164 aa7.36□□□□□ -1.23
SKA1-204ENST00000488454 TRGV2A0A075B6R0 118 aa7.35□□□□□ -1.23
SKA1-204ENST00000488454 TRGV1A0A0A0MS02 117 aa7.35□□□□□ -1.23
SKA1-204ENST00000488454 TMEM218A2RU14 115 aa7.35□□□□□ -1.23
SKA1-204ENST00000488454 C19orf71A6NCJ1 209 aa7.35□□□□□ -1.23
SKA1-204ENST00000488454 F8W036 122 aa7.35□□□□□ -1.23
SKA1-204ENST00000488454 M0R2P5 195 aa7.35□□□□□ -1.23
SKA1-204ENST00000488454 GATCO43716 136 aaKnown RBP7.35□□□□□ -1.23
SKA1-204ENST00000488454 NANOS2P60321 138 aaKnown RBP7.35□□□□□ -1.23
SKA1-204ENST00000488454 RPL23P62829 140 aaKnown RBP7.35□□□□□ -1.23
SKA1-204ENST00000488454 ADIRFQ15847 76 aa7.35□□□□□ -1.23
SKA1-204ENST00000488454 LGALS9BQ3B8N2 356 aa7.35□□□□□ -1.23
SKA1-204ENST00000488454 KRTAP19-4Q3LI73 84 aa7.35□□□□□ -1.23
SKA1-204ENST00000488454 C15orf54Q8N8G6 183 aa7.35□□□□□ -1.23
SKA1-204ENST00000488454 RNASE7Q9H1E1 156 aaKnown RBP7.35□□□□□ -1.23
SKA1-204ENST00000488454 CELA1Q9UNI1 258 aa7.35□□□□□ -1.23
SKA1-204ENST00000488454 GAGE12BA1L429 117 aa7.34□□□□□ -1.23
SKA1-204ENST00000488454 SPINK4O60575 86 aa7.34□□□□□ -1.23
SKA1-204ENST00000488454 GAGE7O76087 117 aa7.34□□□□□ -1.23
SKA1-204ENST00000488454 CXCL1P09341 107 aa7.34□□□□□ -1.23
SKA1-204ENST00000488454 ARMS2P0C7Q2 107 aa7.34□□□□□ -1.23
SKA1-204ENST00000488454 GAGE12FP0CL80 117 aa7.34□□□□□ -1.23
SKA1-204ENST00000488454 GAGE12GP0CL81 117 aa7.34□□□□□ -1.23
SKA1-204ENST00000488454 GAGE12IP0CL82 117 aa7.34□□□□□ -1.23
SKA1-204ENST00000488454 RPL19P84098 196 aaKnown RBP7.34□□□□□ -1.23
SKA1-204ENST00000488454 C12orf74Q32Q52 190 aa7.34□□□□□ -1.23
SKA1-204ENST00000488454 DNLZQ5SXM8 178 aa7.34□□□□□ -1.23
SKA1-204ENST00000488454 FAM231DQ6ZW35 169 aa7.34□□□□□ -1.23
SKA1-204ENST00000488454 SYT8Q8NBV8 401 aa7.34□□□□□ -1.23
SKA1-204ENST00000488454 RPP21Q9H633 154 aaKnown RBP7.34□□□□□ -1.23
SKA1-204ENST00000488454 IL36BQ9NZH7 164 aa7.34□□□□□ -1.23
SKA1-204ENST00000488454 PHLDA3Q9Y5J5 127 aa7.34□□□□□ -1.23
SKA1-204ENST00000488454 H3BVH4 76 aa7.33□□□□□ -1.24
SKA1-204ENST00000488454 RNASE3P12724 160 aaKnown RBP7.33□□□□□ -1.24
SKA1-204ENST00000488454 PNRC1Q12796 327 aaPredicted RBP7.33□□□□□ -1.24
SKA1-204ENST00000488454 ZNF876PQ49A33 203 aa7.33□□□□□ -1.24
SKA1-204ENST00000488454 Q6ZTI0 123 aa7.33□□□□□ -1.24
SKA1-204ENST00000488454 OR10G8Q8NGN5 311 aa7.33□□□□□ -1.24
SKA1-204ENST00000488454 RASL10AQ92737 203 aa7.33□□□□□ -1.24
SKA1-204ENST00000488454 ISOC2Q96AB3 205 aa7.33□□□□□ -1.24
SKA1-204ENST00000488454 TPPP3Q9BW30 176 aa7.33□□□□□ -1.24
SKA1-204ENST00000488454 OSTCQ9NRP0 149 aa7.33□□□□□ -1.24
SKA1-204ENST00000488454 MRPL16Q9NX20 251 aaKnown RBP7.33□□□□□ -1.24
SKA1-204ENST00000488454 TRAV10A0A0B4J240 114 aa7.32□□□□□ -1.24
SKA1-204ENST00000488454 A0A1W2PPQ1 181 aa7.32□□□□□ -1.24
SKA1-204ENST00000488454 A8MWL6 223 aa7.32□□□□□ -1.24
SKA1-204ENST00000488454 HTN3P15516 51 aa7.32□□□□□ -1.24
SKA1-204ENST00000488454 Q6ZTC4 211 aa7.32□□□□□ -1.24
SKA1-204ENST00000488454 FER1L6-AS1Q8NA97 138 aa7.32□□□□□ -1.24
SKA1-204ENST00000488454 MUC7Q8TAX7 377 aa7.32□□□□□ -1.24
SKA1-204ENST00000488454 PTH2Q96A98 100 aa7.32□□□□□ -1.24
SKA1-204ENST00000488454 SFRP2Q96HF1 295 aa7.32□□□□□ -1.24
SKA1-204ENST00000488454 C9orf85Q96MD7 179 aa7.32□□□□□ -1.24
SKA1-204ENST00000488454 DEFB131BA0A096LNP1 70 aa7.31□□□□□ -1.24
SKA1-204ENST00000488454 F2Z2F3 143 aa7.31□□□□□ -1.24
SKA1-204ENST00000488454 ATP5G1P05496 136 aa7.31□□□□□ -1.24
SKA1-204ENST00000488454 OR5AL1P0C617 328 aa7.31□□□□□ -1.24
SKA1-204ENST00000488454 GZMBP10144 247 aa7.31□□□□□ -1.24
SKA1-204ENST00000488454 COL7A1Q02388 2944 aa7.31□□□□□ -1.24
SKA1-204ENST00000488454 NDUFA5Q16718 116 aa7.31□□□□□ -1.24
SKA1-204ENST00000488454 CT83Q5H943 113 aa7.31□□□□□ -1.24
SKA1-204ENST00000488454 SPANXN1Q5VSR9 72 aa7.31□□□□□ -1.24
SKA1-204ENST00000488454 ZFP82Q8N141 532 aa7.31□□□□□ -1.24
SKA1-204ENST00000488454 LINC00612Q8N6U2 182 aa7.31□□□□□ -1.24
SKA1-204ENST00000488454 PHLDA1Q8WV24 401 aaPredicted RBP7.31□□□□□ -1.24
SKA1-204ENST00000488454 NDUFAF3Q9BU61 184 aa7.31□□□□□ -1.24
SKA1-204ENST00000488454 SEC11CQ9BY50 192 aa7.31□□□□□ -1.24
SKA1-204ENST00000488454 F5H768 121 aa7.3□□□□□ -1.24
SKA1-204ENST00000488454 M0R381 172 aa7.3□□□□□ -1.24
SKA1-204ENST00000488454 PPP1R2P9O14990 202 aa7.3□□□□□ -1.24
SKA1-204ENST00000488454 MT-ND4LP03901 98 aa7.3□□□□□ -1.24
SKA1-204ENST00000488454 SSTP61278 116 aa7.3□□□□□ -1.24
SKA1-204ENST00000488454 CACNG7P62955 275 aa7.3□□□□□ -1.24
SKA1-204ENST00000488454 PIK3CD-AS1Q5SR53 167 aa7.3□□□□□ -1.24
SKA1-204ENST00000488454 ZNF575Q86XF7 245 aa7.3□□□□□ -1.24
SKA1-204ENST00000488454 OR4C5Q8NGB2 326 aa7.3□□□□□ -1.24
SKA1-204ENST00000488454 C18orf15Q96N68 181 aa7.3□□□□□ -1.24
SKA1-204ENST00000488454 SCRT2Q9NQ03 307 aa7.3□□□□□ -1.24
SKA1-204ENST00000488454 KLK5Q9Y337 293 aaPredicted RBP7.3□□□□□ -1.24
SKA1-204ENST00000488454 TENM3Q9P273 2699 aa7.3□□□□□ -1.24
SKA1-204ENST00000488454 TGP01266 2768 aa7.29□□□□□ -1.24
SKA1-204ENST00000488454 TRAV4A0A0B4J268 109 aa7.29□□□□□ -1.24
SKA1-204ENST00000488454 NUPR2A6NF83 97 aa7.29□□□□□ -1.24
SKA1-204ENST00000488454 A8MWV9 139 aa7.29□□□□□ -1.24
SKA1-204ENST00000488454 C3orf84H3BNL1 204 aa7.29□□□□□ -1.24
SKA1-204ENST00000488454 SNAI2O43623 268 aa7.29□□□□□ -1.24
SKA1-204ENST00000488454 CIDEAO60543 219 aa7.29□□□□□ -1.24
SKA1-204ENST00000488454 IGHV3-53P01767 116 aa7.29□□□□□ -1.24
SKA1-204ENST00000488454 ZFAND6Q6FIF0 208 aa7.29□□□□□ -1.24
SKA1-204ENST00000488454 CEMP1Q6PRD7 247 aaPredicted RBP7.29□□□□□ -1.24
SKA1-204ENST00000488454 TSKUQ8WUA8 353 aa7.29□□□□□ -1.24
SKA1-204ENST00000488454 BORCS7Q96B45 105 aa7.29□□□□□ -1.24
SKA1-204ENST00000488454 TRGV4A0A0C4DH28 118 aa7.28□□□□□ -1.24
SKA1-204ENST00000488454 MUC21A0A0G2JKD1 596 aa7.28□□□□□ -1.24
SKA1-204ENST00000488454 KRTAP4-8A0A0G2JLE6 195 aa7.28□□□□□ -1.24
SKA1-204ENST00000488454 MUC21A0A140T8X8 626 aa7.28□□□□□ -1.24
SKA1-204ENST00000488454 FAM231BA6NCW3 169 aa7.28□□□□□ -1.24
SKA1-204ENST00000488454 IGLC6P0CF74 106 aa7.28□□□□□ -1.24
SKA1-204ENST00000488454 ADCYAP1P18509 176 aa7.28□□□□□ -1.24
SKA1-204ENST00000488454 SLAQ13239 276 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms