RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 OVOL1O14753 267 aa3.53□□□□□ -1.84
SMARCC1-206ENST00000485737 TSHBP01222 138 aa3.53□□□□□ -1.84
SMARCC1-206ENST00000485737 IGHV3-23P01764 117 aa3.53□□□□□ -1.84
SMARCC1-206ENST00000485737 IGHV3-30P01768 117 aa3.53□□□□□ -1.84
SMARCC1-206ENST00000485737 MT-ATP8P03928 68 aa3.53□□□□□ -1.84
SMARCC1-206ENST00000485737 CLEC3BP05452 202 aa3.53□□□□□ -1.84
SMARCC1-206ENST00000485737 SPINK8P0C7L1 97 aa3.53□□□□□ -1.84
SMARCC1-206ENST00000485737 P0DMU3 169 aa3.53□□□□□ -1.84
SMARCC1-206ENST00000485737 FAM231AP0DMU4 169 aa3.53□□□□□ -1.84
SMARCC1-206ENST00000485737 FAM231CP0DMU5 169 aa3.53□□□□□ -1.84
SMARCC1-206ENST00000485737 IGHV3-30-5P0DP03 117 aa3.53□□□□□ -1.84
SMARCC1-206ENST00000485737 LYNX1P0DP58 116 aa3.53□□□□□ -1.84
SMARCC1-206ENST00000485737 ASIPP42127 132 aa3.53□□□□□ -1.84
SMARCC1-206ENST00000485737 CRIP2P52943 208 aaPredicted RBP3.53□□□□□ -1.84
SMARCC1-206ENST00000485737 HES1Q14469 280 aa3.53□□□□□ -1.84
SMARCC1-206ENST00000485737 SCGB1D4Q6XE38 83 aa3.53□□□□□ -1.84
SMARCC1-206ENST00000485737 C10orf126Q8N4M7 172 aa3.53□□□□□ -1.84
SMARCC1-206ENST00000485737 ZFAND2AQ8N6M9 145 aa3.53□□□□□ -1.84
SMARCC1-206ENST00000485737 SLC25A29Q8N8R3 303 aa3.53□□□□□ -1.84
SMARCC1-206ENST00000485737 EEF1AKMT3Q96AZ1 226 aa3.53□□□□□ -1.84
SMARCC1-206ENST00000485737 TIMD4Q96H15 378 aa3.53□□□□□ -1.84
SMARCC1-206ENST00000485737 AMELXQ99217 191 aa3.53□□□□□ -1.84
SMARCC1-206ENST00000485737 SH3BGRL2Q9UJC5 107 aa3.53□□□□□ -1.84
SMARCC1-206ENST00000485737 KIF25-AS1Q9Y6Z4 181 aa3.53□□□□□ -1.84
SMARCC1-206ENST00000485737 KNTC1P50748 2209 aa3.53□□□□□ -1.84
SMARCC1-206ENST00000485737 HEATR1Q9H583 2144 aaKnown RBP3.53□□□□□ -1.84
SMARCC1-206ENST00000485737 A0A0B4J2C4 111 aa3.52□□□□□ -1.85
SMARCC1-206ENST00000485737 A0A0J9YX75 114 aa3.52□□□□□ -1.85
SMARCC1-206ENST00000485737 TRBV6-5A0A0K0K1A5 114 aa3.52□□□□□ -1.85
SMARCC1-206ENST00000485737 IGIPA6NJ69 53 aa3.52□□□□□ -1.85
SMARCC1-206ENST00000485737 BRI3O95415 125 aa3.52□□□□□ -1.85
SMARCC1-206ENST00000485737 TCL1BO95988 128 aa3.52□□□□□ -1.85
SMARCC1-206ENST00000485737 CRYGDP07320 174 aa3.52□□□□□ -1.85
SMARCC1-206ENST00000485737 ZNF688P0C7X2 276 aa3.52□□□□□ -1.85
SMARCC1-206ENST00000485737 SRD5A1P18405 259 aa3.52□□□□□ -1.85
SMARCC1-206ENST00000485737 PSMB2P49721 201 aa3.52□□□□□ -1.85
SMARCC1-206ENST00000485737 LINC00315P59091 139 aa3.52□□□□□ -1.85
SMARCC1-206ENST00000485737 PMVKQ15126 192 aa3.52□□□□□ -1.85
SMARCC1-206ENST00000485737 ZNF876PQ49A33 203 aa3.52□□□□□ -1.85
SMARCC1-206ENST00000485737 C11orf71Q6IPW1 123 aa3.52□□□□□ -1.85
SMARCC1-206ENST00000485737 Q6Q795 121 aa3.52□□□□□ -1.85
SMARCC1-206ENST00000485737 GPHB5Q86YW7 130 aa3.52□□□□□ -1.85
SMARCC1-206ENST00000485737 Q8NA96 180 aa3.52□□□□□ -1.85
SMARCC1-206ENST00000485737 RPL39LQ96EH5 51 aaKnown RBP3.52□□□□□ -1.85
SMARCC1-206ENST00000485737 LINC00477Q96M19 166 aa3.52□□□□□ -1.85
SMARCC1-206ENST00000485737 VKORC1Q9BQB6 163 aa3.52□□□□□ -1.85
SMARCC1-206ENST00000485737 SIRPDQ9H106 197 aa3.52□□□□□ -1.85
SMARCC1-206ENST00000485737 CADP27708 2225 aa3.52□□□□□ -1.85
SMARCC1-206ENST00000485737 GPR179Q6PRD1 2367 aa3.52□□□□□ -1.85
SMARCC1-206ENST00000485737 FRYLO94915 3013 aa3.52□□□□□ -1.85
SMARCC1-206ENST00000485737 PLCE1Q9P212 2302 aa3.52□□□□□ -1.85
SMARCC1-206ENST00000485737 PRUNE2Q8WUY3 3088 aa3.51□□□□□ -1.85
SMARCC1-206ENST00000485737 MALRD1Q5VYJ5 2156 aa3.51□□□□□ -1.85
SMARCC1-206ENST00000485737 LOC107984156A0A0G2JMH3 177 aa3.51□□□□□ -1.85
SMARCC1-206ENST00000485737 FAM223BA6NKX1 122 aa3.51□□□□□ -1.85
SMARCC1-206ENST00000485737 ATP6V0E1O15342 81 aa3.51□□□□□ -1.85
SMARCC1-206ENST00000485737 IGHV1-69P01742 117 aa3.51□□□□□ -1.85
SMARCC1-206ENST00000485737 CFC1BP0CG36 223 aa3.51□□□□□ -1.85
SMARCC1-206ENST00000485737 CFC1P0CG37 223 aa3.51□□□□□ -1.85
SMARCC1-206ENST00000485737 ZFP36P26651 326 aaKnown RBP3.51□□□□□ -1.85
SMARCC1-206ENST00000485737 RPL13AP40429 203 aaKnown RBP3.51□□□□□ -1.85
SMARCC1-206ENST00000485737 POLR2KP53803 58 aaKnown RBP3.51□□□□□ -1.85
SMARCC1-206ENST00000485737 TSPEAR-AS2P59090 65 aa3.51□□□□□ -1.85
SMARCC1-206ENST00000485737 SRSF9Q13242 221 aaKnown RBP eCLIP3.51□□□□□ -1.85
SMARCC1-206ENST00000485737 RHOHQ15669 191 aa3.51□□□□□ -1.85
SMARCC1-206ENST00000485737 ECSCRQ19T08 205 aa3.51□□□□□ -1.85
SMARCC1-206ENST00000485737 KRTAP15-1Q3LI76 137 aa3.51□□□□□ -1.85
SMARCC1-206ENST00000485737 ZFP2Q6ZN57 461 aa3.51□□□□□ -1.85
SMARCC1-206ENST00000485737 ARL17AQ8IVW1 177 aa3.51□□□□□ -1.85
SMARCC1-206ENST00000485737 FAM223AQ8IWN6 122 aa3.51□□□□□ -1.85
SMARCC1-206ENST00000485737 ANKRD29Q8N6D5 301 aa3.51□□□□□ -1.85
SMARCC1-206ENST00000485737 KLK15Q9H2R5 256 aa3.51□□□□□ -1.85
SMARCC1-206ENST00000485737 PRO1854Q9UHT4 67 aa3.51□□□□□ -1.85
SMARCC1-206ENST00000485737 TP53TG1Q9Y2A0 90 aa3.51□□□□□ -1.85
SMARCC1-206ENST00000485737 PHLDA3Q9Y5J5 127 aa3.51□□□□□ -1.85
SMARCC1-206ENST00000485737 IGHV3OR16-8A0A075B7F1 116 aa3.5□□□□□ -1.85
SMARCC1-206ENST00000485737 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.5□□□□□ -1.85
SMARCC1-206ENST00000485737 IGHV3-66A0A0C4DH42 116 aa3.5□□□□□ -1.85
SMARCC1-206ENST00000485737 TRBV27A0A0K0K1C4 114 aa3.5□□□□□ -1.85
SMARCC1-206ENST00000485737 SDHAF1A6NFY7 115 aa3.5□□□□□ -1.85
SMARCC1-206ENST00000485737 KLLNB2CW77 178 aa3.5□□□□□ -1.85
SMARCC1-206ENST00000485737 J3QQQ9 107 aa3.5□□□□□ -1.85
SMARCC1-206ENST00000485737 LGALS9O00182 355 aa3.5□□□□□ -1.85
SMARCC1-206ENST00000485737 RHODO00212 210 aa3.5□□□□□ -1.85
SMARCC1-206ENST00000485737 NDUFA4O00483 81 aa3.5□□□□□ -1.85
SMARCC1-206ENST00000485737 VCYO14598 125 aa3.5□□□□□ -1.85
SMARCC1-206ENST00000485737 LEPROTO15243 131 aa3.5□□□□□ -1.85
SMARCC1-206ENST00000485737 DUSP14O95147 198 aaKnown RBP3.5□□□□□ -1.85
SMARCC1-206ENST00000485737 IGHV3-33P01772 117 aa3.5□□□□□ -1.85
SMARCC1-206ENST00000485737 RNASE3P12724 160 aaKnown RBP3.5□□□□□ -1.85
SMARCC1-206ENST00000485737 UBE2E1P51965 193 aa3.5□□□□□ -1.85
SMARCC1-206ENST00000485737 MRPL23Q16540 153 aaKnown RBP3.5□□□□□ -1.85
SMARCC1-206ENST00000485737 NSUN5P1Q3KNT7 163 aa3.5□□□□□ -1.85
SMARCC1-206ENST00000485737 ANXA2RQ3ZCQ2 193 aa3.5□□□□□ -1.85
SMARCC1-206ENST00000485737 Q5PR19 223 aa3.5□□□□□ -1.85
SMARCC1-206ENST00000485737 ZFAND6Q6FIF0 208 aa3.5□□□□□ -1.85
SMARCC1-206ENST00000485737 CLEC19AQ6UXS0 136 aa3.5□□□□□ -1.85
SMARCC1-206ENST00000485737 Q6ZQT7 251 aa3.5□□□□□ -1.85
SMARCC1-206ENST00000485737 C14orf178Q8N769 122 aaPredicted RBP3.5□□□□□ -1.85
SMARCC1-206ENST00000485737 OR10J6PQ8NGY7 276 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms