RNA–Protein interactions for RNA: ENST00000484933.6

LINC01140-206, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,368 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-206ENST00000484933 ERCC8Q13216 396 aa7.85□□□□□ -1.15
LINC01140-206ENST00000484933 Q6ZS46 218 aa7.85□□□□□ -1.15
LINC01140-206ENST00000484933 Q8N8P6 123 aa7.85□□□□□ -1.15
LINC01140-206ENST00000484933 RNF125Q96EQ8 232 aa7.85□□□□□ -1.15
LINC01140-206ENST00000484933 PRR25Q96S07 402 aa7.85□□□□□ -1.15
LINC01140-206ENST00000484933 FAM215AQ9Y5M1 114 aa7.85□□□□□ -1.15
LINC01140-206ENST00000484933 IGHV3-66A0A0C4DH42 116 aa7.85□□□□□ -1.15
LINC01140-206ENST00000484933 CFC1BP0CG36 223 aa7.85□□□□□ -1.15
LINC01140-206ENST00000484933 CFC1P0CG37 223 aa7.85□□□□□ -1.15
LINC01140-206ENST00000484933 LOXP28300 417 aaPredicted RBP7.85□□□□□ -1.15
LINC01140-206ENST00000484933 MRGPRG-AS1Q2M3A8 158 aa7.85□□□□□ -1.15
LINC01140-206ENST00000484933 OR10J6PQ8NGY7 276 aa7.85□□□□□ -1.15
LINC01140-206ENST00000484933 BSPH1Q075Z2 132 aa7.84□□□□□ -1.15
LINC01140-206ENST00000484933 ADIPOQQ15848 244 aa7.84□□□□□ -1.15
LINC01140-206ENST00000484933 GATD1Q8NB37 220 aa7.84□□□□□ -1.15
LINC01140-206ENST00000484933 DUX3Q96PT4 197 aa7.84□□□□□ -1.15
LINC01140-206ENST00000484933 HERVK_113P61574 105 aa7.84□□□□□ -1.15
LINC01140-206ENST00000484933 SPANXN1Q5VSR9 72 aa7.84□□□□□ -1.15
LINC01140-206ENST00000484933 C10orf126Q8N4M7 172 aa7.84□□□□□ -1.15
LINC01140-206ENST00000484933 TMEM178BH3BS89 294 aa7.84□□□□□ -1.16
LINC01140-206ENST00000484933 UBE2D1P51668 147 aa7.84□□□□□ -1.16
LINC01140-206ENST00000484933 TMEM170BQ5T4T1 132 aa7.84□□□□□ -1.16
LINC01140-206ENST00000484933 TEX36Q5VZQ5 186 aa7.84□□□□□ -1.16
LINC01140-206ENST00000484933 PRO1854Q9UHT4 67 aa7.84□□□□□ -1.16
LINC01140-206ENST00000484933 CSDC2Q9Y534 153 aaKnown RBP7.84□□□□□ -1.16
LINC01140-206ENST00000484933 RASL10AQ92737 203 aa7.83□□□□□ -1.16
LINC01140-206ENST00000484933 SHANK2-AS3Q9BTD1 123 aa7.83□□□□□ -1.16
LINC01140-206ENST00000484933 LINC00574Q9H8X3 128 aa7.83□□□□□ -1.16
LINC01140-206ENST00000484933 IGHV3-49A0A0A0MS15 119 aa7.83□□□□□ -1.16
LINC01140-206ENST00000484933 IGHV1-3A0A0C4DH29 117 aa7.83□□□□□ -1.16
LINC01140-206ENST00000484933 CD7P09564 240 aa7.83□□□□□ -1.16
LINC01140-206ENST00000484933 ASIPP42127 132 aa7.83□□□□□ -1.16
LINC01140-206ENST00000484933 C9orf153Q5TBE3 101 aa7.83□□□□□ -1.16
LINC01140-206ENST00000484933 ODF3Q96PU9 254 aa7.83□□□□□ -1.16
LINC01140-206ENST00000484933 MBD3L4A6NDZ8 208 aaPredicted RBP7.82□□□□□ -1.16
LINC01140-206ENST00000484933 MBD3L3A6NE82 208 aaPredicted RBP7.82□□□□□ -1.16
LINC01140-206ENST00000484933 MBD3L5A6NJ08 208 aaPredicted RBP7.82□□□□□ -1.16
LINC01140-206ENST00000484933 TEX22C9J3V5 150 aa7.82□□□□□ -1.16
LINC01140-206ENST00000484933 ELANEP08246 267 aa7.82□□□□□ -1.16
LINC01140-206ENST00000484933 Q6ZS92 163 aa7.82□□□□□ -1.16
LINC01140-206ENST00000484933 MBD3L2Q8NHZ7 208 aaPredicted RBP7.82□□□□□ -1.16
LINC01140-206ENST00000484933 CELSR2Q9HCU4 2923 aa7.82□□□□□ -1.16
LINC01140-206ENST00000484933 FAM236AA0A1B0GUQ0 79 aa7.82□□□□□ -1.16
LINC01140-206ENST00000484933 FAM236BA0A1B0GV22 79 aa7.82□□□□□ -1.16
LINC01140-206ENST00000484933 INS-IGF2F8WCM5 200 aa7.82□□□□□ -1.16
LINC01140-206ENST00000484933 ZNF491Q8N8L2 437 aa7.82□□□□□ -1.16
LINC01140-206ENST00000484933 I3L2K1 104 aa7.82□□□□□ -1.16
LINC01140-206ENST00000484933 K7ENP7 123 aa7.82□□□□□ -1.16
LINC01140-206ENST00000484933 MRPS12O15235 138 aaKnown RBP7.82□□□□□ -1.16
LINC01140-206ENST00000484933 TMEM30BQ3MIR4 351 aa7.82□□□□□ -1.16
LINC01140-206ENST00000484933 IL17RELQ6ZVW7 336 aa7.82□□□□□ -1.16
LINC01140-206ENST00000484933 HOXB4P17483 251 aaPredicted RBP7.81□□□□□ -1.16
LINC01140-206ENST00000484933 EDA2RQ9HAV5 297 aa7.81□□□□□ -1.16
LINC01140-206ENST00000484933 TRGV11A0A075B6L2 103 aa7.81□□□□□ -1.16
LINC01140-206ENST00000484933 A4D1N5 150 aa7.81□□□□□ -1.16
LINC01140-206ENST00000484933 M0R381 172 aa7.81□□□□□ -1.16
LINC01140-206ENST00000484933 TIMM23O14925 209 aa7.81□□□□□ -1.16
LINC01140-206ENST00000484933 ANKHD1Q8IWZ3 2542 aaKnown RBP7.81□□□□□ -1.16
LINC01140-206ENST00000484933 H3BRN7 92 aa7.8□□□□□ -1.16
LINC01140-206ENST00000484933 K7EIM0 57 aa7.8□□□□□ -1.16
LINC01140-206ENST00000484933 LY6HO94772 140 aa7.8□□□□□ -1.16
LINC01140-206ENST00000484933 PRSS2P07478 247 aa7.8□□□□□ -1.16
LINC01140-206ENST00000484933 TMEM14CQ9P0S9 112 aa7.8□□□□□ -1.16
LINC01140-206ENST00000484933 COL27A1Q8IZC6 1860 aaPredicted RBP7.8□□□□□ -1.16
LINC01140-206ENST00000484933 TLN2Q9Y4G6 2542 aa7.8□□□□□ -1.16
LINC01140-206ENST00000484933 CEACAM4O75871 244 aa7.8□□□□□ -1.16
LINC01140-206ENST00000484933 MGPP08493 103 aa7.8□□□□□ -1.16
LINC01140-206ENST00000484933 C2orf82Q6UX34 121 aa7.8□□□□□ -1.16
LINC01140-206ENST00000484933 RNF182Q8N6D2 247 aa7.8□□□□□ -1.16
LINC01140-206ENST00000484933 IGLC6P0CF74 106 aa7.8□□□□□ -1.16
LINC01140-206ENST00000484933 NPC2P61916 151 aa7.8□□□□□ -1.16
LINC01140-206ENST00000484933 PMVKQ15126 192 aa7.8□□□□□ -1.16
LINC01140-206ENST00000484933 CFHR4Q92496 578 aa7.8□□□□□ -1.16
LINC01140-206ENST00000484933 H3BMM0 161 aa7.79□□□□□ -1.16
LINC01140-206ENST00000484933 CEMP1Q6PRD7 247 aaPredicted RBP7.79□□□□□ -1.16
LINC01140-206ENST00000484933 C2orf66Q6UXQ4 117 aa7.79□□□□□ -1.16
LINC01140-206ENST00000484933 GFRALQ6UXV0 394 aa7.79□□□□□ -1.16
LINC01140-206ENST00000484933 UBE2WQ96B02 151 aa7.79□□□□□ -1.16
LINC01140-206ENST00000484933 A0A0J9YY99 117 aa7.79□□□□□ -1.16
LINC01140-206ENST00000484933 BUB1B-PAK6H3BSN5 160 aa7.79□□□□□ -1.16
LINC01140-206ENST00000484933 RPL39LQ96EH5 51 aaKnown RBP7.79□□□□□ -1.16
LINC01140-206ENST00000484933 USP9YO00507 2555 aaPredicted RBP7.79□□□□□ -1.16
LINC01140-206ENST00000484933 CSPG4Q6UVK1 2322 aa7.79□□□□□ -1.16
LINC01140-206ENST00000484933 IGLV2-18A0A075B6J9 118 aa7.79□□□□□ -1.16
LINC01140-206ENST00000484933 ZNF22P17026 224 aaPredicted RBP7.79□□□□□ -1.16
LINC01140-206ENST00000484933 C5orf47Q569G3 176 aa7.79□□□□□ -1.16
LINC01140-206ENST00000484933 C14orf178Q8N769 122 aaPredicted RBP7.79□□□□□ -1.16
LINC01140-206ENST00000484933 GCN1Q92616 2671 aaKnown RBP7.79□□□□□ -1.16
LINC01140-206ENST00000484933 THBDP07204 575 aa7.78□□□□□ -1.16
LINC01140-206ENST00000484933 LINC01620Q4KN68 170 aa7.78□□□□□ -1.16
LINC01140-206ENST00000484933 C11orf86A6NJI1 115 aa7.78□□□□□ -1.16
LINC01140-206ENST00000484933 PRAC2D3DTV9 90 aa7.78□□□□□ -1.16
LINC01140-206ENST00000484933 FAM19A5Q7Z5A7 132 aaPredicted RBP7.78□□□□□ -1.16
LINC01140-206ENST00000484933 LINC00311Q8N616 119 aa7.78□□□□□ -1.16
LINC01140-206ENST00000484933 BAALCQ8WXS3 180 aa7.78□□□□□ -1.16
LINC01140-206ENST00000484933 RNASE6Q93091 150 aaKnown RBP7.78□□□□□ -1.16
LINC01140-206ENST00000484933 BBC3Q96PG8 261 aaPredicted RBP7.78□□□□□ -1.16
LINC01140-206ENST00000484933 ADARB2-AS1A8MUL3 147 aa7.77□□□□□ -1.16
LINC01140-206ENST00000484933 RS1O15537 224 aa7.77□□□□□ -1.16
LINC01140-206ENST00000484933 DYNAPQ8N1N2 210 aa7.77□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms