RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 DEFB136Q30KP8 78 aa7.78□□□□□ -1.16
CPNE1-218ENST00000439806 MPV17L2Q567V2 206 aa7.78□□□□□ -1.16
CPNE1-218ENST00000439806 BVES-AS1Q5T3Y7 98 aa7.78□□□□□ -1.16
CPNE1-218ENST00000439806 C18orf65Q6ZTR6 163 aa7.78□□□□□ -1.16
CPNE1-218ENST00000439806 DYNLRB2Q8TF09 96 aa7.78□□□□□ -1.16
CPNE1-218ENST00000439806 RPL39LQ96EH5 51 aaKnown RBP7.78□□□□□ -1.16
CPNE1-218ENST00000439806 TMEM208Q9BTX3 173 aa7.78□□□□□ -1.16
CPNE1-218ENST00000439806 SPTAN1Q13813 2472 aaKnown RBP7.78□□□□□ -1.16
CPNE1-218ENST00000439806 TRGV11A0A075B6L2 103 aa7.77□□□□□ -1.17
CPNE1-218ENST00000439806 TRAV12-2A0A075B6T6 113 aa7.77□□□□□ -1.17
CPNE1-218ENST00000439806 TRAV2A0A0B4J234 112 aa7.77□□□□□ -1.17
CPNE1-218ENST00000439806 IGHV3-16A0A0C4DH30 117 aa7.77□□□□□ -1.17
CPNE1-218ENST00000439806 DPM2O94777 84 aa7.77□□□□□ -1.17
CPNE1-218ENST00000439806 NMUP48645 174 aa7.77□□□□□ -1.17
CPNE1-218ENST00000439806 TCTAP57738 103 aa7.77□□□□□ -1.17
CPNE1-218ENST00000439806 POM121L12Q8N7R1 296 aa7.77□□□□□ -1.17
CPNE1-218ENST00000439806 KLHL30-AS1Q8NEE0 82 aa7.77□□□□□ -1.17
CPNE1-218ENST00000439806 OR11H1Q8NG94 326 aa7.77□□□□□ -1.17
CPNE1-218ENST00000439806 C9orf85Q96MD7 179 aa7.77□□□□□ -1.17
CPNE1-218ENST00000439806 MUC4Q99102 2169 aa7.76□□□□□ -1.17
CPNE1-218ENST00000439806 F5H697 171 aa7.76□□□□□ -1.17
CPNE1-218ENST00000439806 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.76□□□□□ -1.17
CPNE1-218ENST00000439806 FGF6P10767 208 aa7.76□□□□□ -1.17
CPNE1-218ENST00000439806 DEFB131AP59861 70 aa7.76□□□□□ -1.17
CPNE1-218ENST00000439806 C2orf91Q6ZV80 131 aa7.76□□□□□ -1.17
CPNE1-218ENST00000439806 WFDC11Q8NEX6 87 aa7.76□□□□□ -1.17
CPNE1-218ENST00000439806 OR9G4Q8NGQ1 327 aa7.76□□□□□ -1.17
CPNE1-218ENST00000439806 ORAOV1Q8WV07 137 aa7.76□□□□□ -1.17
CPNE1-218ENST00000439806 SCGB3A1Q96QR1 104 aa7.76□□□□□ -1.17
CPNE1-218ENST00000439806 ZMAT4Q9H898 229 aa7.76□□□□□ -1.17
CPNE1-218ENST00000439806 A0A087WX48 190 aa7.75□□□□□ -1.17
CPNE1-218ENST00000439806 DNAJC9-AS1A6NH13 148 aa7.75□□□□□ -1.17
CPNE1-218ENST00000439806 KNCNA6PVL3 124 aa7.75□□□□□ -1.17
CPNE1-218ENST00000439806 SIVA1O15304 175 aa7.75□□□□□ -1.17
CPNE1-218ENST00000439806 TMEM97Q5BJF2 176 aa7.75□□□□□ -1.17
CPNE1-218ENST00000439806 SUMO4Q6EEV6 95 aa7.75□□□□□ -1.17
CPNE1-218ENST00000439806 ADAMTSL5Q6ZMM2 481 aa7.75□□□□□ -1.17
CPNE1-218ENST00000439806 Q6ZSV7 163 aa7.75□□□□□ -1.17
CPNE1-218ENST00000439806 BOD1L2Q8IYS8 172 aa7.75□□□□□ -1.17
CPNE1-218ENST00000439806 TOMM6Q96B49 74 aa7.75□□□□□ -1.17
CPNE1-218ENST00000439806 CSTL1Q9H114 145 aa7.75□□□□□ -1.17
CPNE1-218ENST00000439806 TMEM160Q9NX00 188 aa7.75□□□□□ -1.17
CPNE1-218ENST00000439806 COX11Q9Y6N1 276 aa7.75□□□□□ -1.17
CPNE1-218ENST00000439806 KIF25-AS1Q9Y6Z4 181 aa7.75□□□□□ -1.17
CPNE1-218ENST00000439806 CSPG4Q6UVK1 2322 aa7.75□□□□□ -1.17
CPNE1-218ENST00000439806 ACACBO00763 2458 aa7.74□□□□□ -1.17
CPNE1-218ENST00000439806 ANKRD17O75179 2603 aaKnown RBP7.74□□□□□ -1.17
CPNE1-218ENST00000439806 TACC2O95359 2948 aa7.74□□□□□ -1.17
CPNE1-218ENST00000439806 A0A087WWL8 130 aa7.74□□□□□ -1.17
CPNE1-218ENST00000439806 RPL32P62910 135 aaKnown RBP7.74□□□□□ -1.17
CPNE1-218ENST00000439806 HSD52Q0P140 79 aa7.74□□□□□ -1.17
CPNE1-218ENST00000439806 ZNF56Q15929 161 aa7.74□□□□□ -1.17
CPNE1-218ENST00000439806 FAM74A4Q5TZK3 123 aa7.74□□□□□ -1.17
CPNE1-218ENST00000439806 HIST2H2BCQ6DN03 193 aa7.74□□□□□ -1.17
CPNE1-218ENST00000439806 AMTNQ6UX39 209 aa7.74□□□□□ -1.17
CPNE1-218ENST00000439806 Q8N1Y9 231 aa7.74□□□□□ -1.17
CPNE1-218ENST00000439806 DUX3Q96PT4 197 aa7.74□□□□□ -1.17
CPNE1-218ENST00000439806 JPT2Q9H910 190 aa7.74□□□□□ -1.17
CPNE1-218ENST00000439806 RELNP78509 3460 aa7.73□□□□□ -1.17
CPNE1-218ENST00000439806 SPG11Q96JI7 2443 aa7.73□□□□□ -1.17
CPNE1-218ENST00000439806 TRAV12-1A0A0B4J245 112 aa7.73□□□□□ -1.17
CPNE1-218ENST00000439806 CBY3A6NI87 242 aa7.73□□□□□ -1.17
CPNE1-218ENST00000439806 LINC01549A6NIU2 74 aa7.73□□□□□ -1.17
CPNE1-218ENST00000439806 H7C1H1 209 aa7.73□□□□□ -1.17
CPNE1-218ENST00000439806 J3QKU1 62 aa7.73□□□□□ -1.17
CPNE1-218ENST00000439806 HLA-DRB4P13762 266 aa7.73□□□□□ -1.17
CPNE1-218ENST00000439806 PLNP26678 52 aa7.73□□□□□ -1.17
CPNE1-218ENST00000439806 LINC00315P59091 139 aa7.73□□□□□ -1.17
CPNE1-218ENST00000439806 SEC11AP67812 179 aa7.73□□□□□ -1.17
CPNE1-218ENST00000439806 ZC2HC1BQ5TFG8 222 aa7.73□□□□□ -1.17
CPNE1-218ENST00000439806 C2orf66Q6UXQ4 117 aa7.73□□□□□ -1.17
CPNE1-218ENST00000439806 GTSCR1Q86UQ5 136 aa7.73□□□□□ -1.17
CPNE1-218ENST00000439806 DLX4Q92988 240 aaPredicted RBP7.73□□□□□ -1.17
CPNE1-218ENST00000439806 YAE1D1Q9NRH1 226 aa7.73□□□□□ -1.17
CPNE1-218ENST00000439806 MRPL35Q9NZE8 188 aaKnown RBP7.73□□□□□ -1.17
CPNE1-218ENST00000439806 MDFICQ9P1T7 246 aa7.73□□□□□ -1.17
CPNE1-218ENST00000439806 CHTOPQ9Y3Y2 248 aaKnown RBP7.73□□□□□ -1.17
CPNE1-218ENST00000439806 HLA-DRB4X5D2U9 266 aa7.73□□□□□ -1.17
CPNE1-218ENST00000439806 IGSF10Q6WRI0 2623 aa7.73□□□□□ -1.17
CPNE1-218ENST00000439806 AGRNO00468 2067 aa7.72□□□□□ -1.17
CPNE1-218ENST00000439806 F8VRH5 84 aa7.72□□□□□ -1.17
CPNE1-218ENST00000439806 VCYO14598 125 aa7.72□□□□□ -1.17
CPNE1-218ENST00000439806 NPSP0C0P6 89 aa7.72□□□□□ -1.17
CPNE1-218ENST00000439806 PLA2G2AP14555 144 aa7.72□□□□□ -1.17
CPNE1-218ENST00000439806 Q6ZVH6 145 aa7.72□□□□□ -1.17
CPNE1-218ENST00000439806 NEGR1Q7Z3B1 354 aa7.72□□□□□ -1.17
CPNE1-218ENST00000439806 PCP2Q8IVA1 136 aa7.72□□□□□ -1.17
CPNE1-218ENST00000439806 TMEM61Q8N0U2 210 aa7.72□□□□□ -1.17
CPNE1-218ENST00000439806 KIR2DL4Q99706 377 aa7.72□□□□□ -1.17
CPNE1-218ENST00000439806 CYSLTR1Q9Y271 337 aa7.72□□□□□ -1.17
CPNE1-218ENST00000439806 A6NDN8 102 aa7.71□□□□□ -1.18
CPNE1-218ENST00000439806 A8MTW9 85 aa7.71□□□□□ -1.18
CPNE1-218ENST00000439806 H3BMM0 161 aa7.71□□□□□ -1.18
CPNE1-218ENST00000439806 TAX1BP3O14907 124 aa7.71□□□□□ -1.18
CPNE1-218ENST00000439806 TRPT1Q86TN4 253 aaKnown RBP7.71□□□□□ -1.18
CPNE1-218ENST00000439806 RAX2Q96IS3 184 aa7.71□□□□□ -1.18
CPNE1-218ENST00000439806 MAP6D1Q9H9H5 199 aa7.71□□□□□ -1.18
CPNE1-218ENST00000439806 HHLA3Q9XRX5 114 aa7.71□□□□□ -1.18
CPNE1-218ENST00000439806 USP9XQ93008 2570 aaPredicted RBP7.71□□□□□ -1.18
CPNE1-218ENST00000439806 IGKV2D-26A0A0A0MRZ7 120 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms