RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 ICOSQ9Y6W8 199 aa17.6■□□□□ 0.41
CPNE1-207ENST00000414664 MED9Q9NWA0 146 aa17.59■□□□□ 0.41
CPNE1-207ENST00000414664 PGPEP1LA6NFU8 196 aa17.58■□□□□ 0.4
CPNE1-207ENST00000414664 PIK3CD-AS1Q5SR53 167 aa17.58■□□□□ 0.4
CPNE1-207ENST00000414664 DERL1Q9BUN8 251 aa17.58■□□□□ 0.4
CPNE1-207ENST00000414664 A0A096LPF7 62 aa17.57■□□□□ 0.4
CPNE1-207ENST00000414664 RS1O15537 224 aa17.57■□□□□ 0.4
CPNE1-207ENST00000414664 ZNF506Q5JVG8 444 aa17.57■□□□□ 0.4
CPNE1-207ENST00000414664 LINC00588Q9Y4M8 146 aa17.57■□□□□ 0.4
CPNE1-207ENST00000414664 GRIFINA4D1Z8 144 aa17.56■□□□□ 0.4
CPNE1-207ENST00000414664 MRPL23Q16540 153 aaKnown RBP17.56■□□□□ 0.4
CPNE1-207ENST00000414664 CENPWQ5EE01 88 aa17.56■□□□□ 0.4
CPNE1-207ENST00000414664 LYPD6BQ8NI32 183 aa17.56■□□□□ 0.4
CPNE1-207ENST00000414664 TMSB15BA0A087X1C1 80 aa17.55■□□□□ 0.4
CPNE1-207ENST00000414664 H3BVH4 76 aa17.55■□□□□ 0.4
CPNE1-207ENST00000414664 ARMS2P0C7Q2 107 aa17.55■□□□□ 0.4
CPNE1-207ENST00000414664 CFAP126Q5VTH2 177 aa17.55■□□□□ 0.4
CPNE1-207ENST00000414664 PRR27Q6MZM9 219 aa17.55■□□□□ 0.4
CPNE1-207ENST00000414664 SYT8Q8NBV8 401 aa17.55■□□□□ 0.4
CPNE1-207ENST00000414664 PCNPQ8WW12 178 aaKnown RBP17.55■□□□□ 0.4
CPNE1-207ENST00000414664 SMIM12Q96EX1 92 aa17.55■□□□□ 0.4
CPNE1-207ENST00000414664 IGLV2-18A0A075B6J9 118 aa17.54■□□□□ 0.4
CPNE1-207ENST00000414664 GNG4P50150 75 aa17.54■□□□□ 0.4
CPNE1-207ENST00000414664 ESRGQ1W209 222 aa17.54■□□□□ 0.4
CPNE1-207ENST00000414664 DNAH6Q9C0G6 4158 aa17.53■□□□□ 0.4
CPNE1-207ENST00000414664 NACAE9PAV3 2078 aa17.53■□□□□ 0.4
CPNE1-207ENST00000414664 RBFOX3A6NFN3 312 aa17.53■□□□□ 0.4
CPNE1-207ENST00000414664 A8MWV9 139 aa17.53■□□□□ 0.4
CPNE1-207ENST00000414664 ZNRF2Q8NHG8 242 aa17.53■□□□□ 0.4
CPNE1-207ENST00000414664 PHLDA3Q9Y5J5 127 aa17.53■□□□□ 0.4
CPNE1-207ENST00000414664 RAB19A4D1S5 217 aa17.52■□□□□ 0.4
CPNE1-207ENST00000414664 M0R2N4 97 aa17.52■□□□□ 0.4
CPNE1-207ENST00000414664 CXCL1P09341 107 aa17.52■□□□□ 0.4
CPNE1-207ENST00000414664 MGST1P10620 155 aaKnown RBP17.52■□□□□ 0.4
CPNE1-207ENST00000414664 BIN3Q9NQY0 253 aa17.52■□□□□ 0.4
CPNE1-207ENST00000414664 GYPEP15421 78 aa17.51■□□□□ 0.39
CPNE1-207ENST00000414664 GATA1P15976 413 aaPredicted RBP17.51■□□□□ 0.39
CPNE1-207ENST00000414664 DAZAP1Q96EP5 407 aaKnown RBP17.51■□□□□ 0.39
CPNE1-207ENST00000414664 MED14OSP0DP75 135 aa17.5■□□□□ 0.39
CPNE1-207ENST00000414664 SRIP30626 198 aa17.5■□□□□ 0.39
CPNE1-207ENST00000414664 NEGR1Q7Z3B1 354 aa17.5■□□□□ 0.39
CPNE1-207ENST00000414664 ZNF575Q86XF7 245 aa17.5■□□□□ 0.39
CPNE1-207ENST00000414664 SCRT2Q9NQ03 307 aa17.5■□□□□ 0.39
CPNE1-207ENST00000414664 MRPS16Q9Y3D3 137 aaKnown RBP17.5■□□□□ 0.39
CPNE1-207ENST00000414664 K7EQD1 137 aa17.49■□□□□ 0.39
CPNE1-207ENST00000414664 IGLV2-8P01709 118 aa17.49■□□□□ 0.39
CPNE1-207ENST00000414664 DMRTA1Q5VZB9 504 aa17.49■□□□□ 0.39
CPNE1-207ENST00000414664 ZFP2Q6ZN57 461 aa17.49■□□□□ 0.39
CPNE1-207ENST00000414664 UPK3BQ9BT76 320 aa17.49■□□□□ 0.39
CPNE1-207ENST00000414664 TRBV6-4A0A1B0GX49 114 aa17.48■□□□□ 0.39
CPNE1-207ENST00000414664 TMEM250H0YL14 139 aa17.48■□□□□ 0.39
CPNE1-207ENST00000414664 RPL19P84098 196 aaKnown RBP17.48■□□□□ 0.39
CPNE1-207ENST00000414664 SH2D6Q7Z4S9 175 aa17.48■□□□□ 0.39
CPNE1-207ENST00000414664 ZFP82Q8N141 532 aa17.48■□□□□ 0.39
CPNE1-207ENST00000414664 PRADC1Q9BSG0 188 aa17.48■□□□□ 0.39
CPNE1-207ENST00000414664 PARLQ9H300 379 aa17.48■□□□□ 0.39
CPNE1-207ENST00000414664 Q9H8V8 135 aa17.48■□□□□ 0.39
CPNE1-207ENST00000414664 IGHV3-73A0A0B4J1V6 119 aa17.47■□□□□ 0.39
CPNE1-207ENST00000414664 Q6ZR54 194 aa17.47■□□□□ 0.39
CPNE1-207ENST00000414664 TRBV20OR9-2A0A075B6H5 130 aa17.46■□□□□ 0.39
CPNE1-207ENST00000414664 M0R381 172 aa17.46■□□□□ 0.39
CPNE1-207ENST00000414664 RHOHQ15669 191 aa17.46■□□□□ 0.39
CPNE1-207ENST00000414664 SLC25A29Q8N8R3 303 aa17.46■□□□□ 0.39
CPNE1-207ENST00000414664 EIF5A2Q9GZV4 153 aaKnown RBP17.46■□□□□ 0.39
CPNE1-207ENST00000414664 RHODO00212 210 aa17.45■□□□□ 0.38
CPNE1-207ENST00000414664 RPS20P60866 119 aaKnown RBP17.45■□□□□ 0.38
CPNE1-207ENST00000414664 TEX261Q6UWH6 196 aa17.45■□□□□ 0.38
CPNE1-207ENST00000414664 LYPD5Q6UWN5 251 aa17.45■□□□□ 0.38
CPNE1-207ENST00000414664 NBDYA0A0U1RRE5 68 aa17.44■□□□□ 0.38
CPNE1-207ENST00000414664 TOR2AQ5JU69 321 aa17.44■□□□□ 0.38
CPNE1-207ENST00000414664 SFRP2Q96HF1 295 aa17.44■□□□□ 0.38
CPNE1-207ENST00000414664 C19orf71A6NCJ1 209 aa17.43■□□□□ 0.38
CPNE1-207ENST00000414664 NDUFS6O75380 124 aaKnown RBP17.43■□□□□ 0.38
CPNE1-207ENST00000414664 OR5AL1P0C617 328 aa17.43■□□□□ 0.38
CPNE1-207ENST00000414664 SOHLH1Q5JUK2 328 aa17.43■□□□□ 0.38
CPNE1-207ENST00000414664 FAM210AQ96ND0 272 aa17.43■□□□□ 0.38
CPNE1-207ENST00000414664 JPT2Q9H910 190 aa17.43■□□□□ 0.38
CPNE1-207ENST00000414664 LOC100131303A0A0U1RQF7 123 aa17.42■□□□□ 0.38
CPNE1-207ENST00000414664 XKRY2A2RUG3 117 aa17.42■□□□□ 0.38
CPNE1-207ENST00000414664 SNAI2O43623 268 aa17.42■□□□□ 0.38
CPNE1-207ENST00000414664 P01737 135 aa17.42■□□□□ 0.38
CPNE1-207ENST00000414664 LINC00336Q6ZUF6 198 aa17.42■□□□□ 0.38
CPNE1-207ENST00000414664 OR2D3Q8NGH3 330 aa17.42■□□□□ 0.38
CPNE1-207ENST00000414664 SSBP4Q9BWG4 385 aaPredicted RBP17.42■□□□□ 0.38
CPNE1-207ENST00000414664 TTC32Q5I0X7 151 aa17.41■□□□□ 0.38
CPNE1-207ENST00000414664 SAMD10Q9BYL1 202 aa17.41■□□□□ 0.38
CPNE1-207ENST00000414664 SPANXN1Q5VSR9 72 aa17.4■□□□□ 0.38
CPNE1-207ENST00000414664 UFSP1Q6NVU6 142 aa17.4■□□□□ 0.38
CPNE1-207ENST00000414664 NXPH4O95158 308 aa17.39■□□□□ 0.37
CPNE1-207ENST00000414664 CEBPGP53567 150 aa17.39■□□□□ 0.37
CPNE1-207ENST00000414664 C1orf134Q5TEV5 83 aa17.39■□□□□ 0.37
CPNE1-207ENST00000414664 FAM74A4Q5TZK3 123 aa17.39■□□□□ 0.37
CPNE1-207ENST00000414664 OR10AG1Q8NH19 301 aa17.39■□□□□ 0.37
CPNE1-207ENST00000414664 OCC1Q8TAD7 63 aa17.39■□□□□ 0.37
CPNE1-207ENST00000414664 SIVA1O15304 175 aa17.38■□□□□ 0.37
CPNE1-207ENST00000414664 A0A087WWL8 130 aa17.37■□□□□ 0.37
CPNE1-207ENST00000414664 A0A1W2PPQ1 181 aa17.37■□□□□ 0.37
CPNE1-207ENST00000414664 CRYGDP07320 174 aa17.37■□□□□ 0.37
CPNE1-207ENST00000414664 TIRAPP58753 221 aa17.37■□□□□ 0.37
CPNE1-207ENST00000414664 Q6ZSN1 163 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms