RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 IFNA17P01571 189 aa1.56□□□□□ -2.16
HMGB3P31-201ENST00000413333 HIST1H1DP16402 221 aaKnown RBP1.56□□□□□ -2.16
HMGB3P31-201ENST00000413333 CKS2P33552 79 aa1.56□□□□□ -2.16
HMGB3P31-201ENST00000413333 ETV6P41212 452 aa1.56□□□□□ -2.16
HMGB3P31-201ENST00000413333 LINC01545Q5VT33 79 aa1.56□□□□□ -2.16
HMGB3P31-201ENST00000413333 ATP11AUNQ6ZP68 121 aa1.56□□□□□ -2.16
HMGB3P31-201ENST00000413333 ACBD7Q8N6N7 88 aa1.56□□□□□ -2.16
HMGB3P31-201ENST00000413333 RERGLQ9H628 205 aa1.56□□□□□ -2.16
HMGB3P31-201ENST00000413333 ANKRD26Q9UPS8 1709 aa1.56□□□□□ -2.16
HMGB3P31-201ENST00000413333 PLXNA2O75051 1894 aa1.56□□□□□ -2.16
HMGB3P31-201ENST00000413333 ABCC10Q5T3U5 1492 aa1.56□□□□□ -2.16
HMGB3P31-201ENST00000413333 MAPKBP1O60336 1514 aa1.56□□□□□ -2.16
HMGB3P31-201ENST00000413333 KIAA0100Q14667 2235 aaKnown RBP1.55□□□□□ -2.16
HMGB3P31-201ENST00000413333 CASZ1Q86V15 1759 aa1.55□□□□□ -2.16
HMGB3P31-201ENST00000413333 SNAPC5O75971 98 aa1.55□□□□□ -2.16
HMGB3P31-201ENST00000413333 TPPP2P59282 170 aa1.55□□□□□ -2.16
HMGB3P31-201ENST00000413333 KRTAP26-1Q6PEX3 210 aa1.55□□□□□ -2.16
HMGB3P31-201ENST00000413333 SNX29P2Q8IUI4 249 aa1.55□□□□□ -2.16
HMGB3P31-201ENST00000413333 C8orf59Q8N0T1 100 aaPredicted RBP1.55□□□□□ -2.16
HMGB3P31-201ENST00000413333 KCNRGQ8N5I3 272 aa1.55□□□□□ -2.16
HMGB3P31-201ENST00000413333 ATP6V0E2Q8NHE4 81 aa1.55□□□□□ -2.16
HMGB3P31-201ENST00000413333 AGPAT4-IT1Q9H0P7 198 aa1.55□□□□□ -2.16
HMGB3P31-201ENST00000413333 CST11Q9H112 138 aa1.55□□□□□ -2.16
HMGB3P31-201ENST00000413333 RPRMQ9NS64 109 aa1.55□□□□□ -2.16
HMGB3P31-201ENST00000413333 PTPRFP10586 1907 aa1.55□□□□□ -2.16
HMGB3P31-201ENST00000413333 CASP8AP2Q9UKL3 1982 aa1.55□□□□□ -2.16
HMGB3P31-201ENST00000413333 RAPGEF2Q9Y4G8 1499 aa1.55□□□□□ -2.16
HMGB3P31-201ENST00000413333 UNC13CQ8NB66 2214 aa1.55□□□□□ -2.16
HMGB3P31-201ENST00000413333 TRAV30A0A087WSZ9 112 aa1.54□□□□□ -2.16
HMGB3P31-201ENST00000413333 TMEM218A2RU14 115 aa1.54□□□□□ -2.16
HMGB3P31-201ENST00000413333 H3BRM9 83 aa1.54□□□□□ -2.16
HMGB3P31-201ENST00000413333 GNG2P59768 71 aa1.54□□□□□ -2.16
HMGB3P31-201ENST00000413333 MIC13Q5XKP0 118 aa1.54□□□□□ -2.16
HMGB3P31-201ENST00000413333 COPS9Q8WXC6 57 aa1.54□□□□□ -2.16
HMGB3P31-201ENST00000413333 SEC11CQ9BY50 192 aa1.54□□□□□ -2.16
HMGB3P31-201ENST00000413333 NAA60Q9H7X0 242 aa1.54□□□□□ -2.16
HMGB3P31-201ENST00000413333 TMEM14CQ9P0S9 112 aa1.54□□□□□ -2.16
HMGB3P31-201ENST00000413333 C22orf24Q9Y442 160 aa1.54□□□□□ -2.16
HMGB3P31-201ENST00000413333 CHD3Q12873 2000 aaKnown RBP1.54□□□□□ -2.16
HMGB3P31-201ENST00000413333 CACNA1BQ00975 2339 aa1.54□□□□□ -2.16
HMGB3P31-201ENST00000413333 IGHV1-24A0A0C4DH33 117 aa1.53□□□□□ -2.16
HMGB3P31-201ENST00000413333 KLF7O75840 302 aaPredicted RBP1.53□□□□□ -2.16
HMGB3P31-201ENST00000413333 ARL14EPLP0DKL9 152 aa1.53□□□□□ -2.16
HMGB3P31-201ENST00000413333 PKIAP61925 76 aa1.53□□□□□ -2.16
HMGB3P31-201ENST00000413333 HSD52Q0P140 79 aa1.53□□□□□ -2.16
HMGB3P31-201ENST00000413333 LSM10Q969L4 123 aaKnown RBP1.53□□□□□ -2.16
HMGB3P31-201ENST00000413333 LINC00526Q96FQ7 95 aa1.53□□□□□ -2.16
HMGB3P31-201ENST00000413333 SPANXDQ9BXN6 97 aa1.53□□□□□ -2.16
HMGB3P31-201ENST00000413333 SERP1Q9Y6X1 66 aa1.53□□□□□ -2.16
HMGB3P31-201ENST00000413333 TECTAO75443 2155 aa1.52□□□□□ -2.17
HMGB3P31-201ENST00000413333 SIP14410 1827 aa1.52□□□□□ -2.17
HMGB3P31-201ENST00000413333 PHIPQ8WWQ0 1821 aa1.52□□□□□ -2.17
HMGB3P31-201ENST00000413333 LAMB1P07942 1786 aa1.52□□□□□ -2.17
HMGB3P31-201ENST00000413333 PRDM2Q13029 1718 aa1.52□□□□□ -2.17
HMGB3P31-201ENST00000413333 SPHKAPQ2M3C7 1700 aa1.52□□□□□ -2.17
HMGB3P31-201ENST00000413333 KTN1Q86UP2 1357 aaKnown RBP1.52□□□□□ -2.17
HMGB3P31-201ENST00000413333 C3orf85A0A1B0GTC6 90 aa1.52□□□□□ -2.17
HMGB3P31-201ENST00000413333 J3QLW9 94 aa1.52□□□□□ -2.17
HMGB3P31-201ENST00000413333 M0R143 59 aa1.52□□□□□ -2.17
HMGB3P31-201ENST00000413333 NUPR1O60356 82 aa1.52□□□□□ -2.17
HMGB3P31-201ENST00000413333 CATR1Q13166 79 aa1.52□□□□□ -2.17
HMGB3P31-201ENST00000413333 Q56UQ5 140 aa1.52□□□□□ -2.17
HMGB3P31-201ENST00000413333 NCMAPQ5T1S8 102 aa1.52□□□□□ -2.17
HMGB3P31-201ENST00000413333 Q6AWC8 147 aa1.52□□□□□ -2.17
HMGB3P31-201ENST00000413333 CASC2Q6XLA1 102 aa1.52□□□□□ -2.17
HMGB3P31-201ENST00000413333 FOXI2Q6ZQN5 318 aa1.52□□□□□ -2.17
HMGB3P31-201ENST00000413333 Q6ZS92 163 aa1.52□□□□□ -2.17
HMGB3P31-201ENST00000413333 ZCCHC23Q6ZST2 131 aa1.52□□□□□ -2.17
HMGB3P31-201ENST00000413333 GTF2H5Q6ZYL4 71 aa1.52□□□□□ -2.17
HMGB3P31-201ENST00000413333 VSTM2AQ8TAG5 236 aa1.52□□□□□ -2.17
HMGB3P31-201ENST00000413333 NOP16Q9Y3C1 178 aaKnown RBP1.52□□□□□ -2.17
HMGB3P31-201ENST00000413333 NCOA6Q14686 2063 aaPredicted RBP1.52□□□□□ -2.17
HMGB3P31-201ENST00000413333 ROBO1Q9Y6N7 1651 aa1.51□□□□□ -2.17
HMGB3P31-201ENST00000413333 SRCAPQ6ZRS2 3230 aa1.51□□□□□ -2.17
HMGB3P31-201ENST00000413333 ADGRB2O60241 1585 aa1.51□□□□□ -2.17
HMGB3P31-201ENST00000413333 ERCC6L2Q5T890 1561 aa1.51□□□□□ -2.17
HMGB3P31-201ENST00000413333 CECR2Q9BXF3 1484 aa1.51□□□□□ -2.17
HMGB3P31-201ENST00000413333 TROQ12816 1431 aaPredicted RBP1.51□□□□□ -2.17
HMGB3P31-201ENST00000413333 SNRNP200O75643 2136 aaKnown RBP1.51□□□□□ -2.17
HMGB3P31-201ENST00000413333 PVALEFA0A1B0GWK0 134 aa1.51□□□□□ -2.17
HMGB3P31-201ENST00000413333 MCRIP1C9JLW8 97 aa1.51□□□□□ -2.17
HMGB3P31-201ENST00000413333 EDF1O60869 148 aaKnown RBP1.51□□□□□ -2.17
HMGB3P31-201ENST00000413333 COX7CP15954 63 aa1.51□□□□□ -2.17
HMGB3P31-201ENST00000413333 LINC00322Q6ZN03 302 aaPredicted RBP1.51□□□□□ -2.17
HMGB3P31-201ENST00000413333 SMIM7Q9BQ49 75 aa1.51□□□□□ -2.17
HMGB3P31-201ENST00000413333 KIAA1551Q9HCM1 1747 aa1.51□□□□□ -2.17
HMGB3P31-201ENST00000413333 COL6A6A6NMZ7 2263 aa1.51□□□□□ -2.17
HMGB3P31-201ENST00000413333 LRP5O75197 1615 aa1.51□□□□□ -2.17
HMGB3P31-201ENST00000413333 LOC107984156A0A0G2JMH3 177 aa1.5□□□□□ -2.17
HMGB3P31-201ENST00000413333 APOC4-APOC2K7ER74 178 aa1.5□□□□□ -2.17
HMGB3P31-201ENST00000413333 APOC2P02655 101 aa1.5□□□□□ -2.17
HMGB3P31-201ENST00000413333 ADCYAP1P18509 176 aa1.5□□□□□ -2.17
HMGB3P31-201ENST00000413333 MIR22HGQ0VDD5 57 aa1.5□□□□□ -2.17
HMGB3P31-201ENST00000413333 OR2T2Q6IF00 324 aa1.5□□□□□ -2.17
HMGB3P31-201ENST00000413333 MRPL54Q6P161 138 aaKnown RBP1.5□□□□□ -2.17
HMGB3P31-201ENST00000413333 SLC25A26Q70HW3 274 aa1.5□□□□□ -2.17
HMGB3P31-201ENST00000413333 ARL17AQ8IVW1 177 aa1.5□□□□□ -2.17
HMGB3P31-201ENST00000413333 PLPP5Q8NEB5 264 aa1.5□□□□□ -2.17
HMGB3P31-201ENST00000413333 TAS2R8Q9NYW2 309 aa1.5□□□□□ -2.17
HMGB3P31-201ENST00000413333 TRIOBPQ9H2D6 2365 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms