RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 TMSB15BA0A087X1C1 80 aa13.85□□□□□ -0.19
PDLIM2-207ENST00000409417 GRIFINA4D1Z8 144 aa13.85□□□□□ -0.19
PDLIM2-207ENST00000409417 SFTA3P0C7M3 94 aa13.85□□□□□ -0.19
PDLIM2-207ENST00000409417 VSIG2Q96IQ7 327 aa13.85□□□□□ -0.19
PDLIM2-207ENST00000409417 PRO0255Q9UI72 69 aa13.85□□□□□ -0.19
PDLIM2-207ENST00000409417 HHLA3Q9XRX5 114 aa13.85□□□□□ -0.19
PDLIM2-207ENST00000409417 VPS13DQ5THJ4 4388 aa13.85□□□□□ -0.19
PDLIM2-207ENST00000409417 PGPEP1LA6NFU8 196 aa13.84□□□□□ -0.19
PDLIM2-207ENST00000409417 H3BVH4 76 aa13.84□□□□□ -0.19
PDLIM2-207ENST00000409417 ARMS2P0C7Q2 107 aa13.84□□□□□ -0.19
PDLIM2-207ENST00000409417 TOR2AQ5JU69 321 aa13.84□□□□□ -0.19
PDLIM2-207ENST00000409417 PIK3CD-AS1Q5SR53 167 aa13.84□□□□□ -0.19
PDLIM2-207ENST00000409417 FAM210AQ96ND0 272 aa13.84□□□□□ -0.19
PDLIM2-207ENST00000409417 EIF5A2Q9GZV4 153 aaKnown RBP13.84□□□□□ -0.19
PDLIM2-207ENST00000409417 TRGV4A0A0C4DH28 118 aa13.83□□□□□ -0.2
PDLIM2-207ENST00000409417 NDUFS6O75380 124 aaKnown RBP13.83□□□□□ -0.2
PDLIM2-207ENST00000409417 MGST1P10620 155 aaKnown RBP13.83□□□□□ -0.2
PDLIM2-207ENST00000409417 RNF212Q495C1 297 aa13.83□□□□□ -0.2
PDLIM2-207ENST00000409417 PAX4O43316 350 aa13.82□□□□□ -0.2
PDLIM2-207ENST00000409417 CRYBA4P53673 196 aa13.82□□□□□ -0.2
PDLIM2-207ENST00000409417 CFAP126Q5VTH2 177 aa13.82□□□□□ -0.2
PDLIM2-207ENST00000409417 SCRT2Q9NQ03 307 aa13.82□□□□□ -0.2
PDLIM2-207ENST00000409417 BIN3Q9NQY0 253 aa13.82□□□□□ -0.2
PDLIM2-207ENST00000409417 CXCL1P09341 107 aa13.81□□□□□ -0.2
PDLIM2-207ENST00000409417 RPL19P84098 196 aaKnown RBP13.81□□□□□ -0.2
PDLIM2-207ENST00000409417 UBE2DNLQ8IWF7 75 aa13.81□□□□□ -0.2
PDLIM2-207ENST00000409417 PCNPQ8WW12 178 aaKnown RBP13.81□□□□□ -0.2
PDLIM2-207ENST00000409417 DAZAP1Q96EP5 407 aaKnown RBP13.81□□□□□ -0.2
PDLIM2-207ENST00000409417 PARLQ9H300 379 aa13.81□□□□□ -0.2
PDLIM2-207ENST00000409417 KMT2AQ03164 3969 aa13.81□□□□□ -0.2
PDLIM2-207ENST00000409417 RS1O15537 224 aa13.8□□□□□ -0.2
PDLIM2-207ENST00000409417 CIDEAO60543 219 aa13.8□□□□□ -0.2
PDLIM2-207ENST00000409417 PHLDA3Q9Y5J5 127 aa13.8□□□□□ -0.2
PDLIM2-207ENST00000409417 C19orf71A6NCJ1 209 aa13.8□□□□□ -0.2
PDLIM2-207ENST00000409417 DMRTA1Q5VZB9 504 aa13.8□□□□□ -0.2
PDLIM2-207ENST00000409417 SYT8Q8NBV8 401 aa13.8□□□□□ -0.2
PDLIM2-207ENST00000409417 A0A096LPF7 62 aa13.79□□□□□ -0.2
PDLIM2-207ENST00000409417 A8MWV9 139 aa13.79□□□□□ -0.2
PDLIM2-207ENST00000409417 MED14OSP0DP75 135 aa13.79□□□□□ -0.2
PDLIM2-207ENST00000409417 CCL18P55774 89 aa13.79□□□□□ -0.2
PDLIM2-207ENST00000409417 FAM3BP58499 235 aaPredicted RBP13.79□□□□□ -0.2
PDLIM2-207ENST00000409417 GATA1P15976 413 aaPredicted RBP13.78□□□□□ -0.2
PDLIM2-207ENST00000409417 ICOSQ9Y6W8 199 aa13.78□□□□□ -0.2
PDLIM2-207ENST00000409417 NACAE9PAV3 2078 aa13.78□□□□□ -0.2
PDLIM2-207ENST00000409417 CEBPGP53567 150 aa13.77□□□□□ -0.21
PDLIM2-207ENST00000409417 ZFP82Q8N141 532 aa13.77□□□□□ -0.21
PDLIM2-207ENST00000409417 OCC1Q8TAD7 63 aa13.77□□□□□ -0.21
PDLIM2-207ENST00000409417 SSBP4Q9BWG4 385 aaPredicted RBP13.77□□□□□ -0.21
PDLIM2-207ENST00000409417 P01737 135 aa13.76□□□□□ -0.21
PDLIM2-207ENST00000409417 OR5AL1P0C617 328 aa13.76□□□□□ -0.21
PDLIM2-207ENST00000409417 RPS20P60866 119 aaKnown RBP13.76□□□□□ -0.21
PDLIM2-207ENST00000409417 MRPL23Q16540 153 aaKnown RBP13.76□□□□□ -0.21
PDLIM2-207ENST00000409417 ZFP2Q6ZN57 461 aa13.76□□□□□ -0.21
PDLIM2-207ENST00000409417 OR2D3Q8NGH3 330 aa13.76□□□□□ -0.21
PDLIM2-207ENST00000409417 LINC00588Q9Y4M8 146 aa13.76□□□□□ -0.21
PDLIM2-207ENST00000409417 M0R381 172 aa13.75□□□□□ -0.21
PDLIM2-207ENST00000409417 SRP19P09132 144 aaKnown RBP13.75□□□□□ -0.21
PDLIM2-207ENST00000409417 IGHV3-73A0A0B4J1V6 119 aa13.74□□□□□ -0.21
PDLIM2-207ENST00000409417 K7EN84 100 aa13.74□□□□□ -0.21
PDLIM2-207ENST00000409417 SNAI2O43623 268 aa13.74□□□□□ -0.21
PDLIM2-207ENST00000409417 GYPEP15421 78 aa13.74□□□□□ -0.21
PDLIM2-207ENST00000409417 ESRGQ1W209 222 aa13.74□□□□□ -0.21
PDLIM2-207ENST00000409417 SMIM7Q9BQ49 75 aa13.74□□□□□ -0.21
PDLIM2-207ENST00000409417 JPT2Q9H910 190 aa13.74□□□□□ -0.21
PDLIM2-207ENST00000409417 TRBV6-4A0A1B0GX49 114 aa13.74□□□□□ -0.21
PDLIM2-207ENST00000409417 XKRY2A2RUG3 117 aa13.74□□□□□ -0.21
PDLIM2-207ENST00000409417 K7EQD1 137 aa13.74□□□□□ -0.21
PDLIM2-207ENST00000409417 NXPH4O95158 308 aa13.74□□□□□ -0.21
PDLIM2-207ENST00000409417 UFSP1Q6NVU6 142 aa13.74□□□□□ -0.21
PDLIM2-207ENST00000409417 SLC25A29Q8N8R3 303 aa13.74□□□□□ -0.21
PDLIM2-207ENST00000409417 NUDT10Q8NFP7 164 aa13.74□□□□□ -0.21
PDLIM2-207ENST00000409417 OR10AG1Q8NH19 301 aa13.74□□□□□ -0.21
PDLIM2-207ENST00000409417 NUDT11Q96G61 164 aa13.74□□□□□ -0.21
PDLIM2-207ENST00000409417 LY96Q9Y6Y9 160 aa13.74□□□□□ -0.21
PDLIM2-207ENST00000409417 SFRP2Q96HF1 295 aa13.73□□□□□ -0.21
PDLIM2-207ENST00000409417 SAMD10Q9BYL1 202 aa13.73□□□□□ -0.21
PDLIM2-207ENST00000409417 SMDT1Q9H4I9 107 aa13.73□□□□□ -0.21
PDLIM2-207ENST00000409417 RHODO00212 210 aa13.72□□□□□ -0.21
PDLIM2-207ENST00000409417 GZMBP10144 247 aa13.72□□□□□ -0.21
PDLIM2-207ENST00000409417 SRIP30626 198 aa13.72□□□□□ -0.21
PDLIM2-207ENST00000409417 PEA15Q15121 130 aa13.72□□□□□ -0.21
PDLIM2-207ENST00000409417 ZNF727A8MUV8 499 aa13.71□□□□□ -0.21
PDLIM2-207ENST00000409417 IGLC6P0CF74 106 aa13.71□□□□□ -0.21
PDLIM2-207ENST00000409417 RAB14P61106 215 aa13.71□□□□□ -0.21
PDLIM2-207ENST00000409417 RHOHQ15669 191 aa13.71□□□□□ -0.21
PDLIM2-207ENST00000409417 NEGR1Q7Z3B1 354 aa13.71□□□□□ -0.21
PDLIM2-207ENST00000409417 ZNRF2Q8NHG8 242 aa13.71□□□□□ -0.21
PDLIM2-207ENST00000409417 PRADC1Q9BSG0 188 aa13.71□□□□□ -0.21
PDLIM2-207ENST00000409417 RNASE7Q9H1E1 156 aaKnown RBP13.71□□□□□ -0.21
PDLIM2-207ENST00000409417 C9JQL5 133 aa13.7□□□□□ -0.22
PDLIM2-207ENST00000409417 SRSF3P84103 164 aaKnown RBP13.7□□□□□ -0.22
PDLIM2-207ENST00000409417 SPANXN1Q5VSR9 72 aa13.7□□□□□ -0.22
PDLIM2-207ENST00000409417 Q6ZSN1 163 aa13.7□□□□□ -0.22
PDLIM2-207ENST00000409417 FER1L6-AS1Q8NA97 138 aa13.7□□□□□ -0.22
PDLIM2-207ENST00000409417 RPP21Q9H633 154 aaKnown RBP13.7□□□□□ -0.22
PDLIM2-207ENST00000409417 MRPS16Q9Y3D3 137 aaKnown RBP13.7□□□□□ -0.22
PDLIM2-207ENST00000409417 A0A087WWL8 130 aa13.69□□□□□ -0.22
PDLIM2-207ENST00000409417 MUC21A0A0G2JKD1 596 aa13.69□□□□□ -0.22
PDLIM2-207ENST00000409417 LOC100131303A0A0U1RQF7 123 aa13.69□□□□□ -0.22
PDLIM2-207ENST00000409417 MUC21A0A140T8X8 626 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms