RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 HHLA3Q9XRX5 114 aa13.28□□□□□ -0.28
PDLIM7-204ENST00000393546 HYDINQ4G0P3 5121 aa13.28□□□□□ -0.28
PDLIM7-204ENST00000393546 TMSB15BA0A087X1C1 80 aa13.27□□□□□ -0.29
PDLIM7-204ENST00000393546 PGPEP1LA6NFU8 196 aa13.27□□□□□ -0.29
PDLIM7-204ENST00000393546 SFTA3P0C7M3 94 aa13.27□□□□□ -0.29
PDLIM7-204ENST00000393546 MGST1P10620 155 aaKnown RBP13.27□□□□□ -0.29
PDLIM7-204ENST00000393546 RNF212Q495C1 297 aa13.27□□□□□ -0.29
PDLIM7-204ENST00000393546 SMIM12Q96EX1 92 aa13.27□□□□□ -0.29
PDLIM7-204ENST00000393546 EIF5A2Q9GZV4 153 aaKnown RBP13.27□□□□□ -0.29
PDLIM7-204ENST00000393546 PAX4O43316 350 aa13.26□□□□□ -0.29
PDLIM7-204ENST00000393546 ARMS2P0C7Q2 107 aa13.26□□□□□ -0.29
PDLIM7-204ENST00000393546 DAZAP1Q96EP5 407 aaKnown RBP13.26□□□□□ -0.29
PDLIM7-204ENST00000393546 TMEM250H0YL14 139 aa13.25□□□□□ -0.29
PDLIM7-204ENST00000393546 H3BVH4 76 aa13.25□□□□□ -0.29
PDLIM7-204ENST00000393546 CIDEAO60543 219 aa13.25□□□□□ -0.29
PDLIM7-204ENST00000393546 IGLV2-8P01709 118 aa13.25□□□□□ -0.29
PDLIM7-204ENST00000393546 TOR2AQ5JU69 321 aa13.25□□□□□ -0.29
PDLIM7-204ENST00000393546 ZNF575Q86XF7 245 aa13.25□□□□□ -0.29
PDLIM7-204ENST00000393546 VSIG2Q96IQ7 327 aa13.25□□□□□ -0.29
PDLIM7-204ENST00000393546 BIN3Q9NQY0 253 aa13.25□□□□□ -0.29
PDLIM7-204ENST00000393546 NACAE9PAV3 2078 aa13.25□□□□□ -0.29
PDLIM7-204ENST00000393546 RS1O15537 224 aa13.24□□□□□ -0.29
PDLIM7-204ENST00000393546 CRYBA4P53673 196 aa13.24□□□□□ -0.29
PDLIM7-204ENST00000393546 PIK3CD-AS1Q5SR53 167 aa13.24□□□□□ -0.29
PDLIM7-204ENST00000393546 SYT8Q8NBV8 401 aa13.24□□□□□ -0.29
PDLIM7-204ENST00000393546 FAM210AQ96ND0 272 aa13.24□□□□□ -0.29
PDLIM7-204ENST00000393546 CCL18P55774 89 aa13.23□□□□□ -0.29
PDLIM7-204ENST00000393546 RPL19P84098 196 aaKnown RBP13.23□□□□□ -0.29
PDLIM7-204ENST00000393546 CFAP126Q5VTH2 177 aa13.23□□□□□ -0.29
PDLIM7-204ENST00000393546 PHLDA3Q9Y5J5 127 aa13.23□□□□□ -0.29
PDLIM7-204ENST00000393546 TRBV20OR9-2A0A075B6H5 130 aa13.22□□□□□ -0.29
PDLIM7-204ENST00000393546 NDUFS6O75380 124 aaKnown RBP13.22□□□□□ -0.29
PDLIM7-204ENST00000393546 CXCL1P09341 107 aa13.22□□□□□ -0.29
PDLIM7-204ENST00000393546 PCNPQ8WW12 178 aaKnown RBP13.22□□□□□ -0.29
PDLIM7-204ENST00000393546 PARLQ9H300 379 aa13.22□□□□□ -0.29
PDLIM7-204ENST00000393546 ICOSQ9Y6W8 199 aa13.22□□□□□ -0.29
PDLIM7-204ENST00000393546 A8MWV9 139 aa13.21□□□□□ -0.29
PDLIM7-204ENST00000393546 CEBPGP53567 150 aa13.21□□□□□ -0.29
PDLIM7-204ENST00000393546 FAM3BP58499 235 aaPredicted RBP13.21□□□□□ -0.29
PDLIM7-204ENST00000393546 DMRTA1Q5VZB9 504 aa13.21□□□□□ -0.29
PDLIM7-204ENST00000393546 SCRT2Q9NQ03 307 aa13.21□□□□□ -0.29
PDLIM7-204ENST00000393546 KMT2AQ03164 3969 aa13.21□□□□□ -0.29
PDLIM7-204ENST00000393546 A0A096LPF7 62 aa13.2□□□□□ -0.3
PDLIM7-204ENST00000393546 C19orf71A6NCJ1 209 aa13.2□□□□□ -0.3
PDLIM7-204ENST00000393546 MED14OSP0DP75 135 aa13.2□□□□□ -0.3
PDLIM7-204ENST00000393546 MRPL23Q16540 153 aaKnown RBP13.2□□□□□ -0.3
PDLIM7-204ENST00000393546 GATA1P15976 413 aaPredicted RBP13.19□□□□□ -0.3
PDLIM7-204ENST00000393546 RPS20P60866 119 aaKnown RBP13.19□□□□□ -0.3
PDLIM7-204ENST00000393546 ZFP82Q8N141 532 aa13.19□□□□□ -0.3
PDLIM7-204ENST00000393546 OCC1Q8TAD7 63 aa13.19□□□□□ -0.3
PDLIM7-204ENST00000393546 DNAH6Q9C0G6 4158 aa13.18□□□□□ -0.3
PDLIM7-204ENST00000393546 IGHV3-73A0A0B4J1V6 119 aa13.18□□□□□ -0.3
PDLIM7-204ENST00000393546 M0R381 172 aa13.18□□□□□ -0.3
PDLIM7-204ENST00000393546 P01737 135 aa13.18□□□□□ -0.3
PDLIM7-204ENST00000393546 OR2D3Q8NGH3 330 aa13.18□□□□□ -0.3
PDLIM7-204ENST00000393546 LINC00588Q9Y4M8 146 aa13.18□□□□□ -0.3
PDLIM7-204ENST00000393546 XKRY2A2RUG3 117 aa13.17□□□□□ -0.3
PDLIM7-204ENST00000393546 SRP19P09132 144 aaKnown RBP13.17□□□□□ -0.3
PDLIM7-204ENST00000393546 GYPEP15421 78 aa13.17□□□□□ -0.3
PDLIM7-204ENST00000393546 ESRGQ1W209 222 aa13.17□□□□□ -0.3
PDLIM7-204ENST00000393546 ZFP2Q6ZN57 461 aa13.17□□□□□ -0.3
PDLIM7-204ENST00000393546 SNAI2O43623 268 aa13.16□□□□□ -0.3
PDLIM7-204ENST00000393546 OR5AL1P0C617 328 aa13.16□□□□□ -0.3
PDLIM7-204ENST00000393546 NUDT10Q8NFP7 164 aa13.16□□□□□ -0.3
PDLIM7-204ENST00000393546 NUDT11Q96G61 164 aa13.16□□□□□ -0.3
PDLIM7-204ENST00000393546 SFRP2Q96HF1 295 aa13.16□□□□□ -0.3
PDLIM7-204ENST00000393546 SSBP4Q9BWG4 385 aaPredicted RBP13.16□□□□□ -0.3
PDLIM7-204ENST00000393546 JPT2Q9H910 190 aa13.16□□□□□ -0.3
PDLIM7-204ENST00000393546 TRBV6-4A0A1B0GX49 114 aa13.15□□□□□ -0.3
PDLIM7-204ENST00000393546 K7EN84 100 aa13.15□□□□□ -0.3
PDLIM7-204ENST00000393546 K7EQD1 137 aa13.15□□□□□ -0.3
PDLIM7-204ENST00000393546 SRIP30626 198 aa13.15□□□□□ -0.3
PDLIM7-204ENST00000393546 RAB14P61106 215 aa13.15□□□□□ -0.3
PDLIM7-204ENST00000393546 PEA15Q15121 130 aa13.15□□□□□ -0.3
PDLIM7-204ENST00000393546 NEGR1Q7Z3B1 354 aa13.15□□□□□ -0.3
PDLIM7-204ENST00000393546 SLC25A29Q8N8R3 303 aa13.15□□□□□ -0.3
PDLIM7-204ENST00000393546 SMIM7Q9BQ49 75 aa13.15□□□□□ -0.3
PDLIM7-204ENST00000393546 PRADC1Q9BSG0 188 aa13.15□□□□□ -0.3
PDLIM7-204ENST00000393546 LY96Q9Y6Y9 160 aa13.15□□□□□ -0.3
PDLIM7-204ENST00000393546 ZNF727A8MUV8 499 aa13.14□□□□□ -0.31
PDLIM7-204ENST00000393546 RHODO00212 210 aa13.14□□□□□ -0.31
PDLIM7-204ENST00000393546 GZMBP10144 247 aa13.14□□□□□ -0.31
PDLIM7-204ENST00000393546 RHOHQ15669 191 aa13.14□□□□□ -0.31
PDLIM7-204ENST00000393546 SPANXN1Q5VSR9 72 aa13.14□□□□□ -0.31
PDLIM7-204ENST00000393546 OR10AG1Q8NH19 301 aa13.14□□□□□ -0.31
PDLIM7-204ENST00000393546 SAMD10Q9BYL1 202 aa13.14□□□□□ -0.31
PDLIM7-204ENST00000393546 IGLV2-18A0A075B6J9 118 aa13.13□□□□□ -0.31
PDLIM7-204ENST00000393546 SH2D6Q7Z4S9 175 aa13.13□□□□□ -0.31
PDLIM7-204ENST00000393546 ZNRF2Q8NHG8 242 aa13.13□□□□□ -0.31
PDLIM7-204ENST00000393546 RNASE7Q9H1E1 156 aaKnown RBP13.13□□□□□ -0.31
PDLIM7-204ENST00000393546 SMDT1Q9H4I9 107 aa13.13□□□□□ -0.31
PDLIM7-204ENST00000393546 MRPS16Q9Y3D3 137 aaKnown RBP13.13□□□□□ -0.31
PDLIM7-204ENST00000393546 LOC100131303A0A0U1RQF7 123 aa13.12□□□□□ -0.31
PDLIM7-204ENST00000393546 M0R2N4 97 aa13.12□□□□□ -0.31
PDLIM7-204ENST00000393546 NXPH4O95158 308 aa13.12□□□□□ -0.31
PDLIM7-204ENST00000393546 FAM74A4Q5TZK3 123 aa13.12□□□□□ -0.31
PDLIM7-204ENST00000393546 UFSP1Q6NVU6 142 aa13.12□□□□□ -0.31
PDLIM7-204ENST00000393546 LYPD5Q6UWN5 251 aa13.12□□□□□ -0.31
PDLIM7-204ENST00000393546 FER1L6-AS1Q8NA97 138 aa13.12□□□□□ -0.31
PDLIM7-204ENST00000393546 TPPP3Q9BW30 176 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 163.2 ms