RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 IGHV2-70DA0A0C4DH43 119 aa9.71□□□□□ -0.85
NPLOC4-202ENST00000374747 NDUFA4O00483 81 aa9.71□□□□□ -0.85
NPLOC4-202ENST00000374747 ZNRF2Q8NHG8 242 aa9.71□□□□□ -0.85
NPLOC4-202ENST00000374747 ARFGEF3Q5TH69 2177 aa9.71□□□□□ -0.85
NPLOC4-202ENST00000374747 PRR20EP86478 221 aa9.71□□□□□ -0.85
NPLOC4-202ENST00000374747 PRR20CP86479 221 aa9.71□□□□□ -0.85
NPLOC4-202ENST00000374747 PRR20DP86480 221 aa9.71□□□□□ -0.85
NPLOC4-202ENST00000374747 PRR20BP86481 221 aa9.71□□□□□ -0.85
NPLOC4-202ENST00000374747 PRR20AP86496 221 aa9.71□□□□□ -0.85
NPLOC4-202ENST00000374747 SRSF2Q01130 221 aaKnown RBP9.71□□□□□ -0.85
NPLOC4-202ENST00000374747 C11orf53Q8IXP5 236 aa9.71□□□□□ -0.85
NPLOC4-202ENST00000374747 MRAPQ8TCY5 172 aa9.71□□□□□ -0.85
NPLOC4-202ENST00000374747 DSCR8Q96T75 97 aa9.71□□□□□ -0.85
NPLOC4-202ENST00000374747 OTOGLQ3ZCN5 2332 aa9.71□□□□□ -0.86
NPLOC4-202ENST00000374747 HERVK_113P63121 156 aa9.71□□□□□ -0.86
NPLOC4-202ENST00000374747 SCRT2Q9NQ03 307 aa9.71□□□□□ -0.86
NPLOC4-202ENST00000374747 G3V318 75 aa9.71□□□□□ -0.86
NPLOC4-202ENST00000374747 DEFB125Q8N687 156 aa9.71□□□□□ -0.86
NPLOC4-202ENST00000374747 CCL25O15444 150 aa9.7□□□□□ -0.86
NPLOC4-202ENST00000374747 NXPH4O95158 308 aa9.7□□□□□ -0.86
NPLOC4-202ENST00000374747 IGLC1P0CG04 106 aa9.7□□□□□ -0.86
NPLOC4-202ENST00000374747 NKAPP1Q8N9T2 125 aa9.7□□□□□ -0.86
NPLOC4-202ENST00000374747 IGHV3-38A0A0C4DH36 116 aa9.7□□□□□ -0.86
NPLOC4-202ENST00000374747 COA6Q5JTJ3 125 aaKnown RBP9.7□□□□□ -0.86
NPLOC4-202ENST00000374747 RUSC1-AS1Q66K80 236 aa9.7□□□□□ -0.86
NPLOC4-202ENST00000374747 EXPH5Q8NEV8 1989 aa9.7□□□□□ -0.86
NPLOC4-202ENST00000374747 HOXD3P31249 432 aaPredicted RBP9.69□□□□□ -0.86
NPLOC4-202ENST00000374747 CRYBA4P53673 196 aa9.69□□□□□ -0.86
NPLOC4-202ENST00000374747 TRAV25A0A0B4J276 109 aa9.69□□□□□ -0.86
NPLOC4-202ENST00000374747 J3QKU1 62 aa9.69□□□□□ -0.86
NPLOC4-202ENST00000374747 CFC1BP0CG36 223 aa9.69□□□□□ -0.86
NPLOC4-202ENST00000374747 CFC1P0CG37 223 aa9.69□□□□□ -0.86
NPLOC4-202ENST00000374747 CFHR3Q02985 330 aa9.69□□□□□ -0.86
NPLOC4-202ENST00000374747 TCTEX1D4Q5JR98 221 aa9.69□□□□□ -0.86
NPLOC4-202ENST00000374747 CDPF1Q6NVV7 123 aa9.69□□□□□ -0.86
NPLOC4-202ENST00000374747 SEM1Q6ZVN7 128 aa9.69□□□□□ -0.86
NPLOC4-202ENST00000374747 TPSG1Q9NRR2 321 aa9.69□□□□□ -0.86
NPLOC4-202ENST00000374747 ASPHD1Q5U4P2 390 aa9.69□□□□□ -0.86
NPLOC4-202ENST00000374747 RNF114Q9Y508 228 aa9.69□□□□□ -0.86
NPLOC4-202ENST00000374747 IGHV1-69DA0A0B4J2H0 117 aa9.69□□□□□ -0.86
NPLOC4-202ENST00000374747 LINC01619G3V211 115 aa9.69□□□□□ -0.86
NPLOC4-202ENST00000374747 IGHV1-69P01742 117 aa9.69□□□□□ -0.86
NPLOC4-202ENST00000374747 TRAV12-2A0A075B6T6 113 aa9.68□□□□□ -0.86
NPLOC4-202ENST00000374747 TRAV12-1A0A0B4J245 112 aa9.68□□□□□ -0.86
NPLOC4-202ENST00000374747 RNF223E7ERA6 249 aa9.68□□□□□ -0.86
NPLOC4-202ENST00000374747 GRNP28799 593 aaKnown RBP9.68□□□□□ -0.86
NPLOC4-202ENST00000374747 GAGE6Q13070 117 aa9.68□□□□□ -0.86
NPLOC4-202ENST00000374747 SMG1Q96Q15 3661 aaKnown RBP9.68□□□□□ -0.86
NPLOC4-202ENST00000374747 K7EMI3 77 aa9.68□□□□□ -0.86
NPLOC4-202ENST00000374747 ZNF493Q6ZR52 646 aa9.68□□□□□ -0.86
NPLOC4-202ENST00000374747 FGF23Q9GZV9 251 aaPredicted RBP9.68□□□□□ -0.86
NPLOC4-202ENST00000374747 KLF2Q9Y5W3 355 aaPredicted RBP9.68□□□□□ -0.86
NPLOC4-202ENST00000374747 POU2AF1Q16633 256 aa9.68□□□□□ -0.86
NPLOC4-202ENST00000374747 ZNF134P52741 427 aa9.68□□□□□ -0.86
NPLOC4-202ENST00000374747 TINCRA0A1B0GVN0 87 aa9.67□□□□□ -0.86
NPLOC4-202ENST00000374747 PRSS29PA6NIE9 313 aa9.67□□□□□ -0.86
NPLOC4-202ENST00000374747 FAM120AOSQ5T036 256 aa9.67□□□□□ -0.86
NPLOC4-202ENST00000374747 LHBP01229 141 aa9.67□□□□□ -0.86
NPLOC4-202ENST00000374747 Q6ZVH6 145 aa9.67□□□□□ -0.86
NPLOC4-202ENST00000374747 ASH1LQ9NR48 2969 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-202ENST00000374747 DAD1P61803 113 aa9.67□□□□□ -0.86
NPLOC4-202ENST00000374747 PCP2Q8IVA1 136 aa9.67□□□□□ -0.86
NPLOC4-202ENST00000374747 C8orf31Q8N9H6 132 aa9.67□□□□□ -0.86
NPLOC4-202ENST00000374747 CEP192Q8TEP8 1941 aa9.67□□□□□ -0.86
NPLOC4-202ENST00000374747 YLPM1P49750 1951 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-202ENST00000374747 F5H768 121 aa9.67□□□□□ -0.86
NPLOC4-202ENST00000374747 B5MCH6 92 aa9.66□□□□□ -0.86
NPLOC4-202ENST00000374747 TMEM258P61165 79 aa9.66□□□□□ -0.86
NPLOC4-202ENST00000374747 Q6ZPA2 131 aa9.66□□□□□ -0.86
NPLOC4-202ENST00000374747 J3QLI3 93 aa9.66□□□□□ -0.86
NPLOC4-202ENST00000374747 RHOHQ15669 191 aa9.66□□□□□ -0.86
NPLOC4-202ENST00000374747 ZNF491Q8N8L2 437 aa9.66□□□□□ -0.86
NPLOC4-202ENST00000374747 ZZEF1O43149 2961 aa9.65□□□□□ -0.86
NPLOC4-202ENST00000374747 ACYP1P07311 99 aa9.65□□□□□ -0.86
NPLOC4-202ENST00000374747 RBM3P98179 157 aaKnown RBP9.65□□□□□ -0.86
NPLOC4-202ENST00000374747 ADORA2A-AS1P86434 159 aa9.65□□□□□ -0.86
NPLOC4-202ENST00000374747 CFHR4Q92496 578 aa9.65□□□□□ -0.87
NPLOC4-202ENST00000374747 TEX48A0A1B0GUV7 120 aa9.64□□□□□ -0.87
NPLOC4-202ENST00000374747 Q8NA96 180 aa9.64□□□□□ -0.87
NPLOC4-202ENST00000374747 EGR2P11161 476 aaPredicted RBP9.64□□□□□ -0.87
NPLOC4-202ENST00000374747 SS18L2Q9UHA2 77 aa9.64□□□□□ -0.87
NPLOC4-202ENST00000374747 MALRD1Q5VYJ5 2156 aa9.64□□□□□ -0.87
NPLOC4-202ENST00000374747 IGHV7-4-1A0A0J9YVY3 117 aa9.64□□□□□ -0.87
NPLOC4-202ENST00000374747 IGLL5B9A064 214 aa9.64□□□□□ -0.87
NPLOC4-202ENST00000374747 BAALC-AS2P0C853 105 aa9.64□□□□□ -0.87
NPLOC4-202ENST00000374747 RNASE13Q5GAN3 156 aaKnown RBP9.64□□□□□ -0.87
NPLOC4-202ENST00000374747 CTSZQ9UBR2 303 aa9.64□□□□□ -0.87
NPLOC4-202ENST00000374747 FBXL19-AS1Q494R0 122 aa9.63□□□□□ -0.87
NPLOC4-202ENST00000374747 DEFB121Q5J5C9 76 aa9.63□□□□□ -0.87
NPLOC4-202ENST00000374747 MRPL53Q96EL3 112 aaKnown RBP9.63□□□□□ -0.87
NPLOC4-202ENST00000374747 Q96MF0 132 aa9.63□□□□□ -0.87
NPLOC4-202ENST00000374747 C17orf77Q96MU5 243 aa9.63□□□□□ -0.87
NPLOC4-202ENST00000374747 ATRXP46100 2492 aa9.63□□□□□ -0.87
NPLOC4-202ENST00000374747 DIAPH2-AS1Q14236 149 aa9.63□□□□□ -0.87
NPLOC4-202ENST00000374747 LINC01545Q5VT33 79 aa9.63□□□□□ -0.87
NPLOC4-202ENST00000374747 DYNAPQ8N1N2 210 aa9.63□□□□□ -0.87
NPLOC4-202ENST00000374747 RBAKDNA6NC62 111 aa9.63□□□□□ -0.87
NPLOC4-202ENST00000374747 CRYGCP07315 174 aa9.63□□□□□ -0.87
NPLOC4-202ENST00000374747 SH2D6Q7Z4S9 175 aa9.63□□□□□ -0.87
NPLOC4-202ENST00000374747 ORMDL1Q9P0S3 153 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms