RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 JPT2Q9H910 190 aa12.3□□□□□ -0.44
SYNM-201ENST00000328642 KLF12Q9Y4X4 402 aa12.3□□□□□ -0.44
SYNM-201ENST00000328642 TMEM262E9PQX1 116 aa12.3□□□□□ -0.44
SYNM-201ENST00000328642 EDN2P20800 178 aa12.3□□□□□ -0.44
SYNM-201ENST00000328642 LOXL1Q08397 574 aaPredicted RBP12.3□□□□□ -0.44
SYNM-201ENST00000328642 NHP2Q9NX24 153 aaKnown RBP12.29□□□□□ -0.44
SYNM-201ENST00000328642 IGHG2P01859 326 aa12.29□□□□□ -0.44
SYNM-201ENST00000328642 CRIP1P50238 77 aa12.29□□□□□ -0.44
SYNM-201ENST00000328642 SMIM12Q96EX1 92 aa12.29□□□□□ -0.44
SYNM-201ENST00000328642 TTTY13Q9BZ97 58 aa12.29□□□□□ -0.44
SYNM-201ENST00000328642 DKK2Q9UBU2 259 aa12.29□□□□□ -0.44
SYNM-201ENST00000328642 RNASE13Q5GAN3 156 aaKnown RBP12.28□□□□□ -0.44
SYNM-201ENST00000328642 RPL39LQ96EH5 51 aaKnown RBP12.28□□□□□ -0.44
SYNM-201ENST00000328642 H3BUT2 72 aa12.28□□□□□ -0.44
SYNM-201ENST00000328642 GEMIN7Q9H840 131 aaKnown RBP12.28□□□□□ -0.44
SYNM-201ENST00000328642 MGAM2Q2M2H8 2515 aa12.28□□□□□ -0.44
SYNM-201ENST00000328642 COA6Q5JTJ3 125 aaKnown RBP12.28□□□□□ -0.44
SYNM-201ENST00000328642 TMEM190Q8WZ59 177 aa12.28□□□□□ -0.44
SYNM-201ENST00000328642 TOMM7Q9P0U1 55 aa12.28□□□□□ -0.44
SYNM-201ENST00000328642 CYSLTR1Q9Y271 337 aa12.28□□□□□ -0.44
SYNM-201ENST00000328642 FAM231BA6NCW3 169 aa12.28□□□□□ -0.44
SYNM-201ENST00000328642 VWC2LB2RUY7 222 aa12.28□□□□□ -0.44
SYNM-201ENST00000328642 DPM2O94777 84 aa12.28□□□□□ -0.44
SYNM-201ENST00000328642 SUMO2P61956 95 aaKnown RBP12.28□□□□□ -0.44
SYNM-201ENST00000328642 SMAD5-AS1Q9Y6J3 95 aa12.28□□□□□ -0.44
SYNM-201ENST00000328642 MAST4O15021 2626 aa12.27□□□□□ -0.44
SYNM-201ENST00000328642 DEFB130BP0DP73 79 aa12.27□□□□□ -0.44
SYNM-201ENST00000328642 DEFB130AP0DP74 79 aa12.27□□□□□ -0.44
SYNM-201ENST00000328642 IGKCP01834 107 aa12.27□□□□□ -0.45
SYNM-201ENST00000328642 LINC01619G3V211 115 aa12.27□□□□□ -0.45
SYNM-201ENST00000328642 NPC2P61916 151 aa12.27□□□□□ -0.45
SYNM-201ENST00000328642 A6NDX4 124 aa12.26□□□□□ -0.45
SYNM-201ENST00000328642 IGLC3P0DOY3 106 aa12.26□□□□□ -0.45
SYNM-201ENST00000328642 LGALS3P17931 250 aaKnown RBP12.26□□□□□ -0.45
SYNM-201ENST00000328642 MLST8Q9BVC4 326 aa12.26□□□□□ -0.45
SYNM-201ENST00000328642 TP53TG3Q9ULZ0 132 aa12.26□□□□□ -0.45
SYNM-201ENST00000328642 C19orf71A6NCJ1 209 aa12.26□□□□□ -0.45
SYNM-201ENST00000328642 UBE2L6O14933 153 aa12.26□□□□□ -0.45
SYNM-201ENST00000328642 PRM2P04554 102 aa12.26□□□□□ -0.45
SYNM-201ENST00000328642 C16orf54Q6UWD8 224 aa12.26□□□□□ -0.45
SYNM-201ENST00000328642 TEX29Q8N6K0 151 aa12.26□□□□□ -0.45
SYNM-201ENST00000328642 VCX2Q9H322 139 aa12.26□□□□□ -0.45
SYNM-201ENST00000328642 CHTOPQ9Y3Y2 248 aaKnown RBP12.26□□□□□ -0.45
SYNM-201ENST00000328642 RNF114Q9Y508 228 aa12.25□□□□□ -0.45
SYNM-201ENST00000328642 K7EMI3 77 aa12.25□□□□□ -0.45
SYNM-201ENST00000328642 CDKN1BP46527 198 aa12.25□□□□□ -0.45
SYNM-201ENST00000328642 MRGPRG-AS1Q2M3A8 158 aa12.25□□□□□ -0.45
SYNM-201ENST00000328642 CRYBG3Q68DQ2 2970 aa12.25□□□□□ -0.45
SYNM-201ENST00000328642 CRXO43186 299 aaPredicted RBP12.24□□□□□ -0.45
SYNM-201ENST00000328642 C18orf65Q6ZTR6 163 aa12.24□□□□□ -0.45
SYNM-201ENST00000328642 LBHQ53QV2 105 aaPredicted RBP12.24□□□□□ -0.45
SYNM-201ENST00000328642 MBD6Q96DN6 1003 aa12.23□□□□□ -0.45
SYNM-201ENST00000328642 C2orf66Q6UXQ4 117 aa12.23□□□□□ -0.45
SYNM-201ENST00000328642 C20orf173Q96LM9 149 aa12.23□□□□□ -0.45
SYNM-201ENST00000328642 SDHAF1A6NFY7 115 aa12.23□□□□□ -0.45
SYNM-201ENST00000328642 ORMDL2Q53FV1 153 aa12.23□□□□□ -0.45
SYNM-201ENST00000328642 MRPL16Q9NX20 251 aaKnown RBP12.23□□□□□ -0.45
SYNM-201ENST00000328642 MRPL35Q9NZE8 188 aaKnown RBP12.23□□□□□ -0.45
SYNM-201ENST00000328642 TRGV4A0A0C4DH28 118 aa12.22□□□□□ -0.45
SYNM-201ENST00000328642 CD28P10747 220 aa12.22□□□□□ -0.45
SYNM-201ENST00000328642 H7C1H1 209 aa12.22□□□□□ -0.45
SYNM-201ENST00000328642 J3QLI3 93 aa12.22□□□□□ -0.45
SYNM-201ENST00000328642 NPSP0C0P6 89 aa12.22□□□□□ -0.45
SYNM-201ENST00000328642 EBI3Q14213 229 aa12.22□□□□□ -0.45
SYNM-201ENST00000328642 ZFAND3Q9H8U3 227 aa12.22□□□□□ -0.45
SYNM-201ENST00000328642 TP53TG1Q9Y2A0 90 aa12.22□□□□□ -0.45
SYNM-201ENST00000328642 IGHV1OR15-1A0A075B7D0 117 aa12.22□□□□□ -0.45
SYNM-201ENST00000328642 ZNF815PA8K554 130 aa12.22□□□□□ -0.45
SYNM-201ENST00000328642 Q8N6K4 173 aa12.22□□□□□ -0.45
SYNM-201ENST00000328642 ELANEP08246 267 aa12.21□□□□□ -0.45
SYNM-201ENST00000328642 TMEM61Q8N0U2 210 aa12.21□□□□□ -0.45
SYNM-201ENST00000328642 GAS8-AS1O95177 125 aa12.21□□□□□ -0.45
SYNM-201ENST00000328642 LGALS1P09382 135 aaKnown RBP12.21□□□□□ -0.46
SYNM-201ENST00000328642 ZNF747Q9BV97 191 aa12.21□□□□□ -0.46
SYNM-201ENST00000328642 TRGV11A0A075B6L2 103 aa12.2□□□□□ -0.46
SYNM-201ENST00000328642 IGLV2-11P01706 119 aa12.2□□□□□ -0.46
SYNM-201ENST00000328642 GTF2H5Q6ZYL4 71 aa12.2□□□□□ -0.46
SYNM-201ENST00000328642 MYCNOSP40205 109 aa12.2□□□□□ -0.46
SYNM-201ENST00000328642 ZNF625Q96I27 306 aaPredicted RBP12.2□□□□□ -0.46
SYNM-201ENST00000328642 ZANQ9Y493 2812 aa12.2□□□□□ -0.46
SYNM-201ENST00000328642 TEX15Q9BXT5 2789 aa12.2□□□□□ -0.46
SYNM-201ENST00000328642 IGHV4-31P0DP07 118 aa12.2□□□□□ -0.46
SYNM-201ENST00000328642 C19orf54Q5BKX5 351 aa12.2□□□□□ -0.46
SYNM-201ENST00000328642 PCP2Q8IVA1 136 aa12.2□□□□□ -0.46
SYNM-201ENST00000328642 MDFICQ9P1T7 246 aa12.2□□□□□ -0.46
SYNM-201ENST00000328642 FABP2P12104 132 aa12.2□□□□□ -0.46
SYNM-201ENST00000328642 C20orf144Q9BQM9 153 aa12.2□□□□□ -0.46
SYNM-201ENST00000328642 MEIG1Q5JSS6 88 aa12.19□□□□□ -0.46
SYNM-201ENST00000328642 SMR3AQ99954 134 aa12.19□□□□□ -0.46
SYNM-201ENST00000328642 A0A096LPF7 62 aa12.19□□□□□ -0.46
SYNM-201ENST00000328642 CCL24O00175 119 aa12.19□□□□□ -0.46
SYNM-201ENST00000328642 PPP1R17O96001 155 aa12.19□□□□□ -0.46
SYNM-201ENST00000328642 SPXQ9BT56 116 aa12.19□□□□□ -0.46
SYNM-201ENST00000328642 C2orf70A6NJV1 201 aa12.19□□□□□ -0.46
SYNM-201ENST00000328642 TEX43Q6ZNM6 134 aa12.19□□□□□ -0.46
SYNM-201ENST00000328642 GAGE12BA1L429 117 aa12.18□□□□□ -0.46
SYNM-201ENST00000328642 F8W735 103 aaPredicted RBP12.18□□□□□ -0.46
SYNM-201ENST00000328642 GAGE7O76087 117 aa12.18□□□□□ -0.46
SYNM-201ENST00000328642 GAGE12FP0CL80 117 aa12.18□□□□□ -0.46
SYNM-201ENST00000328642 GAGE12GP0CL81 117 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms