RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 ORM1P02763 201 aa9.93□□□□□ -0.82
PPP1CA-201ENST00000312989 BTF3P20290 206 aaKnown RBP9.93□□□□□ -0.82
PPP1CA-201ENST00000312989 LINC00315P59091 139 aa9.93□□□□□ -0.82
PPP1CA-201ENST00000312989 LGALSLQ3ZCW2 172 aaPredicted RBP9.93□□□□□ -0.82
PPP1CA-201ENST00000312989 UFSP1Q6NVU6 142 aa9.93□□□□□ -0.82
PPP1CA-201ENST00000312989 WFDC10BQ8IUB3 73 aa9.93□□□□□ -0.82
PPP1CA-201ENST00000312989 TCTE3Q8IZS6 198 aa9.93□□□□□ -0.82
PPP1CA-201ENST00000312989 SLC25A29Q8N8R3 303 aa9.93□□□□□ -0.82
PPP1CA-201ENST00000312989 FABP5P3A8MUU1 101 aa9.92□□□□□ -0.82
PPP1CA-201ENST00000312989 KRBOX1C9JBD0 128 aa9.92□□□□□ -0.82
PPP1CA-201ENST00000312989 SIVA1O15304 175 aa9.92□□□□□ -0.82
PPP1CA-201ENST00000312989 SH2D1AO60880 128 aa9.92□□□□□ -0.82
PPP1CA-201ENST00000312989 PPT1P50897 306 aa9.92□□□□□ -0.82
PPP1CA-201ENST00000312989 ZNF674Q2M3X9 581 aa9.92□□□□□ -0.82
PPP1CA-201ENST00000312989 Q6ZSN1 163 aa9.92□□□□□ -0.82
PPP1CA-201ENST00000312989 SFT2D1Q8WV19 159 aa9.92□□□□□ -0.82
PPP1CA-201ENST00000312989 FMC1Q96HJ9 113 aa9.92□□□□□ -0.82
PPP1CA-201ENST00000312989 KRTAP17-1Q9BYP8 105 aa9.92□□□□□ -0.82
PPP1CA-201ENST00000312989 ZFP30Q9Y2G7 519 aa9.92□□□□□ -0.82
PPP1CA-201ENST00000312989 LINC00694P0DN24 101 aa9.91□□□□□ -0.82
PPP1CA-201ENST00000312989 MED14OSP0DP75 135 aa9.91□□□□□ -0.82
PPP1CA-201ENST00000312989 SRIP30626 198 aa9.91□□□□□ -0.82
PPP1CA-201ENST00000312989 CCL20P78556 96 aa9.91□□□□□ -0.82
PPP1CA-201ENST00000312989 MLST8Q9BVC4 326 aa9.91□□□□□ -0.82
PPP1CA-201ENST00000312989 SCRT2Q9NQ03 307 aa9.91□□□□□ -0.82
PPP1CA-201ENST00000312989 IL36BQ9NZH7 164 aa9.91□□□□□ -0.82
PPP1CA-201ENST00000312989 A0A1B0GV50 99 aa9.9□□□□□ -0.82
PPP1CA-201ENST00000312989 TRBV6-4A0A1B0GX49 114 aa9.9□□□□□ -0.82
PPP1CA-201ENST00000312989 SCO2A0A1W2PP80 73 aa9.9□□□□□ -0.82
PPP1CA-201ENST00000312989 TPT1P13693 172 aaKnown RBP9.9□□□□□ -0.82
PPP1CA-201ENST00000312989 TIRAPP58753 221 aa9.9□□□□□ -0.82
PPP1CA-201ENST00000312989 LINC01559Q495D7 138 aa9.9□□□□□ -0.82
PPP1CA-201ENST00000312989 PIK3CD-AS1Q5SR53 167 aa9.9□□□□□ -0.82
PPP1CA-201ENST00000312989 CST9LP1Q5W188 147 aa9.9□□□□□ -0.82
PPP1CA-201ENST00000312989 PARLQ9H300 379 aa9.9□□□□□ -0.82
PPP1CA-201ENST00000312989 JPT2Q9H910 190 aa9.9□□□□□ -0.82
PPP1CA-201ENST00000312989 Q9UF83 564 aa9.9□□□□□ -0.82
PPP1CA-201ENST00000312989 TNFRSF18Q9Y5U5 241 aa9.9□□□□□ -0.82
PPP1CA-201ENST00000312989 IGHV3-73A0A0B4J1V6 119 aa9.89□□□□□ -0.83
PPP1CA-201ENST00000312989 DNAH10OSP0CZ25 163 aa9.89□□□□□ -0.83
PPP1CA-201ENST00000312989 SAMD10Q9BYL1 202 aa9.89□□□□□ -0.83
PPP1CA-201ENST00000312989 TRAV1-1A0A0B4J248 108 aa9.88□□□□□ -0.83
PPP1CA-201ENST00000312989 B4DEV8 164 aa9.88□□□□□ -0.83
PPP1CA-201ENST00000312989 H3BVH4 76 aa9.88□□□□□ -0.83
PPP1CA-201ENST00000312989 M0R036 132 aa9.88□□□□□ -0.83
PPP1CA-201ENST00000312989 CIDEAO60543 219 aa9.88□□□□□ -0.83
PPP1CA-201ENST00000312989 H2AFB1P0C5Y9 115 aa9.88□□□□□ -0.83
PPP1CA-201ENST00000312989 ASIPP42127 132 aa9.88□□□□□ -0.83
PPP1CA-201ENST00000312989 AKR1C3P42330 323 aa9.88□□□□□ -0.83
PPP1CA-201ENST00000312989 KRTAP10-2P60368 255 aa9.88□□□□□ -0.83
PPP1CA-201ENST00000312989 FAM162BQ5T6X4 162 aa9.88□□□□□ -0.83
PPP1CA-201ENST00000312989 DMRTA1Q5VZB9 504 aa9.88□□□□□ -0.83
PPP1CA-201ENST00000312989 NHLRC2Q8NBF2 726 aa9.88□□□□□ -0.83
PPP1CA-201ENST00000312989 PCNPQ8WW12 178 aaKnown RBP9.88□□□□□ -0.83
PPP1CA-201ENST00000312989 GRIFINA4D1Z8 144 aa9.88□□□□□ -0.83
PPP1CA-201ENST00000312989 C1QBP02746 253 aa9.88□□□□□ -0.83
PPP1CA-201ENST00000312989 ARMS2P0C7Q2 107 aa9.88□□□□□ -0.83
PPP1CA-201ENST00000312989 UBE2G1P62253 170 aa9.88□□□□□ -0.83
PPP1CA-201ENST00000312989 RHOHQ15669 191 aa9.88□□□□□ -0.83
PPP1CA-201ENST00000312989 TXNDC17Q9BRA2 123 aa9.88□□□□□ -0.83
PPP1CA-201ENST00000312989 PFDN1O60925 122 aa9.87□□□□□ -0.83
PPP1CA-201ENST00000312989 MGST1P10620 155 aaKnown RBP9.87□□□□□ -0.83
PPP1CA-201ENST00000312989 EIF5AP63241 154 aaKnown RBP9.87□□□□□ -0.83
PPP1CA-201ENST00000312989 ZFP2Q6ZN57 461 aa9.87□□□□□ -0.83
PPP1CA-201ENST00000312989 C11orf52Q96A22 123 aa9.87□□□□□ -0.83
PPP1CA-201ENST00000312989 A8MWV9 139 aa9.86□□□□□ -0.83
PPP1CA-201ENST00000312989 SULT1A2P50226 295 aa9.86□□□□□ -0.83
PPP1CA-201ENST00000312989 DERL1Q9BUN8 251 aa9.86□□□□□ -0.83
PPP1CA-201ENST00000312989 LY96Q9Y6Y9 160 aa9.86□□□□□ -0.83
PPP1CA-201ENST00000312989 IGLV2-8P01709 118 aa9.85□□□□□ -0.83
PPP1CA-201ENST00000312989 CRYGDP07320 174 aa9.85□□□□□ -0.83
PPP1CA-201ENST00000312989 S100A4P26447 101 aaKnown RBP9.85□□□□□ -0.83
PPP1CA-201ENST00000312989 RPL19P84098 196 aaKnown RBP9.85□□□□□ -0.83
PPP1CA-201ENST00000312989 SH2D6Q7Z4S9 175 aa9.85□□□□□ -0.83
PPP1CA-201ENST00000312989 SPATA12Q7Z6I5 190 aa9.85□□□□□ -0.83
PPP1CA-201ENST00000312989 C9orf62Q8N4C0 152 aa9.85□□□□□ -0.83
PPP1CA-201ENST00000312989 C14orf178Q8N769 122 aaPredicted RBP9.85□□□□□ -0.83
PPP1CA-201ENST00000312989 DNAH8Q96JB1 4490 aa9.85□□□□□ -0.83
PPP1CA-201ENST00000312989 TMSB15BA0A087X1C1 80 aa9.84□□□□□ -0.83
PPP1CA-201ENST00000312989 S100A9P06702 114 aaKnown RBP9.84□□□□□ -0.83
PPP1CA-201ENST00000312989 RAB5CP51148 216 aa9.84□□□□□ -0.83
PPP1CA-201ENST00000312989 SFRP2Q96HF1 295 aa9.84□□□□□ -0.83
PPP1CA-201ENST00000312989 PRADC1Q9BSG0 188 aa9.84□□□□□ -0.83
PPP1CA-201ENST00000312989 C16orf90A8MZG2 172 aa9.83□□□□□ -0.84
PPP1CA-201ENST00000312989 K7EP13 123 aa9.83□□□□□ -0.84
PPP1CA-201ENST00000312989 CXCL1P09341 107 aa9.83□□□□□ -0.84
PPP1CA-201ENST00000312989 RPL35P42766 123 aaKnown RBP9.83□□□□□ -0.84
PPP1CA-201ENST00000312989 LINC01556Q5JQF7 62 aa9.83□□□□□ -0.84
PPP1CA-201ENST00000312989 SSBP4Q9BWG4 385 aaPredicted RBP9.83□□□□□ -0.84
PPP1CA-201ENST00000312989 MANBALQ9NQG1 85 aa9.83□□□□□ -0.84
PPP1CA-201ENST00000312989 GNG13Q9P2W3 67 aa9.83□□□□□ -0.84
PPP1CA-201ENST00000312989 FAT1Q14517 4588 aa9.82□□□□□ -0.84
PPP1CA-201ENST00000312989 SNAI2O43623 268 aa9.82□□□□□ -0.84
PPP1CA-201ENST00000312989 LELP1Q5T871 98 aa9.82□□□□□ -0.84
PPP1CA-201ENST00000312989 SLC51BQ86UW2 128 aa9.82□□□□□ -0.84
PPP1CA-201ENST00000312989 BAGE2Q86Y30 109 aa9.82□□□□□ -0.84
PPP1CA-201ENST00000312989 Q8N3U1 123 aa9.82□□□□□ -0.84
PPP1CA-201ENST00000312989 TRBV20OR9-2A0A075B6H5 130 aa9.81□□□□□ -0.84
PPP1CA-201ENST00000312989 IGHV3-38A0A0C4DH36 116 aa9.81□□□□□ -0.84
PPP1CA-201ENST00000312989 OR10AG1Q8NH19 301 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms