RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 P0C879 139 aa8.59□□□□□ -1.03
PBRM1-201ENST00000296302 PIFOQ8TCI5 191 aa8.59□□□□□ -1.03
PBRM1-201ENST00000296302 TIMM17AQ99595 171 aa8.59□□□□□ -1.03
PBRM1-201ENST00000296302 WI2-2373I1.2A0A1W2PRP0 233 aa8.59□□□□□ -1.03
PBRM1-201ENST00000296302 ELANEP08246 267 aa8.59□□□□□ -1.03
PBRM1-201ENST00000296302 MALRD1Q5VYJ5 2156 aa8.59□□□□□ -1.03
PBRM1-201ENST00000296302 CTSGP08311 255 aa8.59□□□□□ -1.04
PBRM1-201ENST00000296302 FAM236AA0A1B0GUQ0 79 aa8.58□□□□□ -1.04
PBRM1-201ENST00000296302 FAM236BA0A1B0GV22 79 aa8.58□□□□□ -1.04
PBRM1-201ENST00000296302 J3KT08 172 aa8.58□□□□□ -1.04
PBRM1-201ENST00000296302 GNLYP22749 145 aa8.58□□□□□ -1.04
PBRM1-201ENST00000296302 MRAPQ8TCY5 172 aa8.58□□□□□ -1.04
PBRM1-201ENST00000296302 BAALCQ8WXS3 180 aa8.58□□□□□ -1.04
PBRM1-201ENST00000296302 GPR179Q6PRD1 2367 aa8.58□□□□□ -1.04
PBRM1-201ENST00000296302 TRAV26-1A0A087WT03 109 aa8.58□□□□□ -1.04
PBRM1-201ENST00000296302 BUB3O43684 328 aa8.58□□□□□ -1.04
PBRM1-201ENST00000296302 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.58□□□□□ -1.04
PBRM1-201ENST00000296302 IGKV2-29A2NJV5 120 aaPredicted RBP8.58□□□□□ -1.04
PBRM1-201ENST00000296302 MED14OSP0DP75 135 aa8.58□□□□□ -1.04
PBRM1-201ENST00000296302 NKAPP1Q8N9T2 125 aa8.58□□□□□ -1.04
PBRM1-201ENST00000296302 RS1O15537 224 aa8.58□□□□□ -1.04
PBRM1-201ENST00000296302 ODF3L1Q8IXM7 274 aa8.58□□□□□ -1.04
PBRM1-201ENST00000296302 TRAV25A0A0B4J276 109 aa8.57□□□□□ -1.04
PBRM1-201ENST00000296302 C11orf86A6NJI1 115 aa8.57□□□□□ -1.04
PBRM1-201ENST00000296302 RNF114Q9Y508 228 aa8.57□□□□□ -1.04
PBRM1-201ENST00000296302 HOXB4P17483 251 aaPredicted RBP8.57□□□□□ -1.04
PBRM1-201ENST00000296302 DAD1P61803 113 aa8.57□□□□□ -1.04
PBRM1-201ENST00000296302 IGLV2-8P01709 118 aa8.56□□□□□ -1.04
PBRM1-201ENST00000296302 C9orf47Q6ZRZ4 202 aa8.56□□□□□ -1.04
PBRM1-201ENST00000296302 ZNF503Q96F45 646 aa8.56□□□□□ -1.04
PBRM1-201ENST00000296302 TICRRQ7Z2Z1 1910 aa8.56□□□□□ -1.04
PBRM1-201ENST00000296302 IGHV7-81A0A0B4J1V7 117 aa8.56□□□□□ -1.04
PBRM1-201ENST00000296302 IGLV2-23P01705 113 aa8.56□□□□□ -1.04
PBRM1-201ENST00000296302 CRYGCP07315 174 aa8.56□□□□□ -1.04
PBRM1-201ENST00000296302 PRR30Q53SZ7 412 aaPredicted RBP8.56□□□□□ -1.04
PBRM1-201ENST00000296302 SPRNQ5BIV9 151 aa8.56□□□□□ -1.04
PBRM1-201ENST00000296302 Q71RC1 249 aaPredicted RBP8.56□□□□□ -1.04
PBRM1-201ENST00000296302 PRSS33Q8NF86 280 aa8.56□□□□□ -1.04
PBRM1-201ENST00000296302 A0A1B0GX51 115 aa8.56□□□□□ -1.04
PBRM1-201ENST00000296302 RIF1Q5UIP0 2472 aaKnown RBP8.56□□□□□ -1.04
PBRM1-201ENST00000296302 SPRY2O43597 315 aa8.56□□□□□ -1.04
PBRM1-201ENST00000296302 C16orf54Q6UWD8 224 aa8.56□□□□□ -1.04
PBRM1-201ENST00000296302 RITA1Q96K30 269 aa8.55□□□□□ -1.04
PBRM1-201ENST00000296302 CACNA1BQ00975 2339 aa8.55□□□□□ -1.04
PBRM1-201ENST00000296302 F5H768 121 aa8.55□□□□□ -1.04
PBRM1-201ENST00000296302 RNF152Q8N8N0 203 aa8.55□□□□□ -1.04
PBRM1-201ENST00000296302 U3KQE9 123 aa8.55□□□□□ -1.04
PBRM1-201ENST00000296302 TANC1Q9C0D5 1861 aa8.55□□□□□ -1.04
PBRM1-201ENST00000296302 CENPVL3A0A0U1RRI6 287 aa8.55□□□□□ -1.04
PBRM1-201ENST00000296302 TEX22C9J3V5 150 aa8.55□□□□□ -1.04
PBRM1-201ENST00000296302 J3QLI3 93 aa8.55□□□□□ -1.04
PBRM1-201ENST00000296302 PLXNB3Q9ULL4 1909 aa8.55□□□□□ -1.04
PBRM1-201ENST00000296302 TNRC6AQ8NDV7 1962 aaKnown RBP8.55□□□□□ -1.04
PBRM1-201ENST00000296302 K7ENP7 123 aa8.55□□□□□ -1.04
PBRM1-201ENST00000296302 CITED2Q99967 270 aaPredicted RBP8.55□□□□□ -1.04
PBRM1-201ENST00000296302 SND1-IT1Q9HBX3 110 aa8.55□□□□□ -1.04
PBRM1-201ENST00000296302 COL6A6A6NMZ7 2263 aa8.54□□□□□ -1.04
PBRM1-201ENST00000296302 MRPL36Q9P0J6 103 aaKnown RBP8.54□□□□□ -1.04
PBRM1-201ENST00000296302 NDUFA11Q86Y39 141 aa8.54□□□□□ -1.04
PBRM1-201ENST00000296302 DENND4CQ5VZ89 1909 aa8.54□□□□□ -1.04
PBRM1-201ENST00000296302 PRAC2D3DTV9 90 aa8.54□□□□□ -1.04
PBRM1-201ENST00000296302 ATP5G1P05496 136 aa8.54□□□□□ -1.04
PBRM1-201ENST00000296302 ZNF295-AS1Q8N0V1 137 aa8.54□□□□□ -1.04
PBRM1-201ENST00000296302 RPL39P62891 51 aaKnown RBP8.53□□□□□ -1.04
PBRM1-201ENST00000296302 COL4A3Q01955 1670 aa8.53□□□□□ -1.04
PBRM1-201ENST00000296302 LGALS9O00182 355 aa8.53□□□□□ -1.04
PBRM1-201ENST00000296302 NBL1P41271 181 aa8.53□□□□□ -1.04
PBRM1-201ENST00000296302 NBASA2RRP1 2371 aa8.53□□□□□ -1.04
PBRM1-201ENST00000296302 ANGP03950 147 aaKnown RBP8.53□□□□□ -1.04
PBRM1-201ENST00000296302 GDF5OSQ5U4N7 250 aa8.53□□□□□ -1.04
PBRM1-201ENST00000296302 Q6ZUT4 128 aa8.53□□□□□ -1.04
PBRM1-201ENST00000296302 MBD6Q96DN6 1003 aa8.53□□□□□ -1.04
PBRM1-201ENST00000296302 HOXD3P31249 432 aaPredicted RBP8.52□□□□□ -1.05
PBRM1-201ENST00000296302 RBX1P62877 108 aa8.52□□□□□ -1.05
PBRM1-201ENST00000296302 UBE2DNLQ8IWF7 75 aa8.52□□□□□ -1.05
PBRM1-201ENST00000296302 TRAV4A0A0B4J268 109 aa8.52□□□□□ -1.05
PBRM1-201ENST00000296302 IGKV3D-7A0A0C4DH55 119 aa8.52□□□□□ -1.05
PBRM1-201ENST00000296302 PSCAO43653 123 aa8.52□□□□□ -1.05
PBRM1-201ENST00000296302 PTH2Q96A98 100 aa8.52□□□□□ -1.05
PBRM1-201ENST00000296302 TM2D2Q9BX73 214 aa8.52□□□□□ -1.05
PBRM1-201ENST00000296302 E7EUB6 86 aa8.52□□□□□ -1.05
PBRM1-201ENST00000296302 H3BQ85 93 aa8.52□□□□□ -1.05
PBRM1-201ENST00000296302 LOXL1Q08397 574 aaPredicted RBP8.52□□□□□ -1.05
PBRM1-201ENST00000296302 MLST8Q9BVC4 326 aa8.52□□□□□ -1.05
PBRM1-201ENST00000296302 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.51□□□□□ -1.056e-7■■■■■ 31.4
PBRM1-201ENST00000296302 IGKV1D-37A0A075B6S9 117 aa8.51□□□□□ -1.05
PBRM1-201ENST00000296302 IGLV1-47P01700 117 aa8.51□□□□□ -1.05
PBRM1-201ENST00000296302 XCL1P47992 114 aa8.51□□□□□ -1.05
PBRM1-201ENST00000296302 RNF223E7ERA6 249 aa8.51□□□□□ -1.05
PBRM1-201ENST00000296302 IGHG2P01859 326 aa8.51□□□□□ -1.05
PBRM1-201ENST00000296302 GTF3C1Q12789 2109 aa8.51□□□□□ -1.05
PBRM1-201ENST00000296302 JMJD7-PLA2G4BH0Y9G9 81 aa8.51□□□□□ -1.05
PBRM1-201ENST00000296302 PSMB8P28062 276 aa8.51□□□□□ -1.05
PBRM1-201ENST00000296302 DAZ2Q13117 558 aaKnown RBP8.51□□□□□ -1.05
PBRM1-201ENST00000296302 IGFL2Q6UWQ7 119 aa8.51□□□□□ -1.05
PBRM1-201ENST00000296302 DAZ4Q86SG3 579 aaKnown RBP8.51□□□□□ -1.05
PBRM1-201ENST00000296302 LINC00643Q86TS7 51 aa8.51□□□□□ -1.05
PBRM1-201ENST00000296302 DAZ3Q9NR90 486 aaKnown RBP8.51□□□□□ -1.05
PBRM1-201ENST00000296302 TP53TG3Q9ULZ0 132 aa8.51□□□□□ -1.05
PBRM1-201ENST00000296302 MED13Q9UHV7 2174 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms