RNA–Protein interactions for RNA: ENST00000264896.7

SCARB2-201, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCARB2, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-201ENST00000264896 LINC01545Q5VT33 79 aa13.7□□□□□ -0.22
SCARB2-201ENST00000264896 NDUFA12Q9UI09 145 aa13.7□□□□□ -0.22
SCARB2-201ENST00000264896 SS18Q15532 418 aa13.7□□□□□ -0.22
SCARB2-201ENST00000264896 PCP2Q8IVA1 136 aa13.7□□□□□ -0.22
SCARB2-201ENST00000264896 J3QQQ9 107 aa13.7□□□□□ -0.22
SCARB2-201ENST00000264896 BLCAPP62952 87 aa13.7□□□□□ -0.22
SCARB2-201ENST00000264896 FOXI2Q6ZQN5 318 aa13.7□□□□□ -0.22
SCARB2-201ENST00000264896 VPREB3Q9UKI3 123 aa13.7□□□□□ -0.22
SCARB2-201ENST00000264896 C2CD3Q4AC94 2353 aa13.69□□□□□ -0.22
SCARB2-201ENST00000264896 NCOR2Q9Y618 2525 aa13.69□□□□□ -0.22
SCARB2-201ENST00000264896 Q8NA96 180 aa13.69□□□□□ -0.22
SCARB2-201ENST00000264896 IGF2RP11717 2491 aa13.69□□□□□ -0.22
SCARB2-201ENST00000264896 IGHV3-38A0A0C4DH36 116 aa13.69□□□□□ -0.22
SCARB2-201ENST00000264896 MUC22E2RYF6 1773 aaPredicted RBP13.68□□□□□ -0.22
SCARB2-201ENST00000264896 IGKV1D-37A0A075B6S9 117 aa13.68□□□□□ -0.22
SCARB2-201ENST00000264896 TRBV25-1A0A075B6N4 114 aa13.68□□□□□ -0.22
SCARB2-201ENST00000264896 IGHV4-38-2P0DP08 117 aa13.68□□□□□ -0.22
SCARB2-201ENST00000264896 UTF1Q5T230 341 aa13.68□□□□□ -0.22
SCARB2-201ENST00000264896 DEFB125Q8N687 156 aa13.68□□□□□ -0.22
SCARB2-201ENST00000264896 SPRY2O43597 315 aa13.68□□□□□ -0.22
SCARB2-201ENST00000264896 HOXD3P31249 432 aaPredicted RBP13.68□□□□□ -0.22
SCARB2-201ENST00000264896 NACAE9PAV3 2078 aa13.68□□□□□ -0.22
SCARB2-201ENST00000264896 F8W1H4 67 aa13.68□□□□□ -0.22
SCARB2-201ENST00000264896 PLA2G5P39877 138 aa13.68□□□□□ -0.22
SCARB2-201ENST00000264896 C16orf54Q6UWD8 224 aa13.68□□□□□ -0.22
SCARB2-201ENST00000264896 AJUBAQ96IF1 538 aa13.68□□□□□ -0.22
SCARB2-201ENST00000264896 PRO1854Q9UHT4 67 aa13.67□□□□□ -0.22
SCARB2-201ENST00000264896 CFHR3Q02985 330 aa13.67□□□□□ -0.22
SCARB2-201ENST00000264896 PRO3102Q9H379 93 aa13.67□□□□□ -0.22
SCARB2-201ENST00000264896 CCDC168Q8NDH2 2452 aa13.67□□□□□ -0.22
SCARB2-201ENST00000264896 EIF4EBP1Q13541 118 aaPredicted RBP13.67□□□□□ -0.22
SCARB2-201ENST00000264896 OVOL2Q9BRP0 275 aa13.67□□□□□ -0.22
SCARB2-201ENST00000264896 ZFP36P26651 326 aaKnown RBP13.67□□□□□ -0.22
SCARB2-201ENST00000264896 C5orf56Q8N8D9 126 aa13.67□□□□□ -0.22
SCARB2-201ENST00000264896 MYO9AB2RTY4 2548 aa13.67□□□□□ -0.22
SCARB2-201ENST00000264896 IGHV4-30-2A0A087WSY4 118 aa13.66□□□□□ -0.22
SCARB2-201ENST00000264896 PRAC2D3DTV9 90 aa13.66□□□□□ -0.22
SCARB2-201ENST00000264896 GAGE7O76087 117 aa13.66□□□□□ -0.22
SCARB2-201ENST00000264896 LGALS1P09382 135 aaKnown RBP13.66□□□□□ -0.22
SCARB2-201ENST00000264896 GAGE12FP0CL80 117 aa13.66□□□□□ -0.22
SCARB2-201ENST00000264896 GAGE12GP0CL81 117 aa13.66□□□□□ -0.22
SCARB2-201ENST00000264896 GAGE12IP0CL82 117 aa13.66□□□□□ -0.22
SCARB2-201ENST00000264896 ANKRD39Q53RE8 183 aa13.66□□□□□ -0.22
SCARB2-201ENST00000264896 Q6ZVH6 145 aa13.66□□□□□ -0.22
SCARB2-201ENST00000264896 FANCD2OSQ96PS1 177 aa13.66□□□□□ -0.22
SCARB2-201ENST00000264896 RHOHQ15669 191 aa13.66□□□□□ -0.22
SCARB2-201ENST00000264896 TMEM243Q9BU79 118 aa13.66□□□□□ -0.22
SCARB2-201ENST00000264896 TRBV6-1A0A0K0K1D8 114 aa13.65□□□□□ -0.22
SCARB2-201ENST00000264896 C19orf71A6NCJ1 209 aa13.65□□□□□ -0.22
SCARB2-201ENST00000264896 K7ERJ3 54 aa13.65□□□□□ -0.22
SCARB2-201ENST00000264896 VWC2LB2RUY7 222 aa13.64□□□□□ -0.23
SCARB2-201ENST00000264896 SPINK8P0C7L1 97 aa13.64□□□□□ -0.23
SCARB2-201ENST00000264896 NAV2Q8IVL1 2488 aa13.64□□□□□ -0.23
SCARB2-201ENST00000264896 FGF6P10767 208 aa13.64□□□□□ -0.23
SCARB2-201ENST00000264896 C12orf74Q32Q52 190 aa13.64□□□□□ -0.23
SCARB2-201ENST00000264896 ZNF48Q96MX3 618 aaPredicted RBP13.64□□□□□ -0.23
SCARB2-201ENST00000264896 C1orf229Q6ZS94 237 aaPredicted RBP13.64□□□□□ -0.23
SCARB2-201ENST00000264896 C10orf105Q8TEF2 133 aa13.64□□□□□ -0.23
SCARB2-201ENST00000264896 H3BMG7 143 aa13.63□□□□□ -0.23
SCARB2-201ENST00000264896 C22orf34Q6ZV56 151 aa13.63□□□□□ -0.23
SCARB2-201ENST00000264896 PPDPFLQ8WWR9 84 aa13.63□□□□□ -0.23
SCARB2-201ENST00000264896 HIVEP2P31629 2446 aa13.63□□□□□ -0.23
SCARB2-201ENST00000264896 RPL39LQ96EH5 51 aaKnown RBP13.63□□□□□ -0.23
SCARB2-201ENST00000264896 CTRLP40313 264 aa13.62□□□□□ -0.23
SCARB2-201ENST00000264896 NAV3Q8IVL0 2385 aa13.62□□□□□ -0.23
SCARB2-201ENST00000264896 IGLV2-8P01709 118 aa13.62□□□□□ -0.23
SCARB2-201ENST00000264896 C9orf47Q6ZRZ4 202 aa13.62□□□□□ -0.23
SCARB2-201ENST00000264896 AMTNQ6UX39 209 aa13.62□□□□□ -0.23
SCARB2-201ENST00000264896 DAZAP2Q15038 168 aaPredicted RBP13.62□□□□□ -0.23
SCARB2-201ENST00000264896 SIRPDQ9H106 197 aa13.62□□□□□ -0.23
SCARB2-201ENST00000264896 TSSC4Q9Y5U2 329 aaPredicted RBP13.61□□□□□ -0.23
SCARB2-201ENST00000264896 TNRC6AQ8NDV7 1962 aaKnown RBP13.6□□□□□ -0.23
SCARB2-201ENST00000264896 SCRT2Q9NQ03 307 aa13.6□□□□□ -0.23
SCARB2-201ENST00000264896 LAMTOR3Q9UHA4 124 aa13.6□□□□□ -0.23
SCARB2-201ENST00000264896 HERVK_113P63121 156 aa13.6□□□□□ -0.23
SCARB2-201ENST00000264896 GAGE6Q13070 117 aa13.6□□□□□ -0.23
SCARB2-201ENST00000264896 DEFB136Q30KP8 78 aa13.6□□□□□ -0.23
SCARB2-201ENST00000264896 CENPFP49454 3210 aa13.59□□□□□ -0.23
SCARB2-201ENST00000264896 PFN2P35080 140 aa13.59□□□□□ -0.23
SCARB2-201ENST00000264896 RNASE13Q5GAN3 156 aaKnown RBP13.59□□□□□ -0.23
SCARB2-201ENST00000264896 DNAJC30Q96LL9 226 aa13.59□□□□□ -0.23
SCARB2-201ENST00000264896 A0A1B0GXF2 115 aa13.59□□□□□ -0.23
SCARB2-201ENST00000264896 BOD1L2Q8IYS8 172 aa13.59□□□□□ -0.23
SCARB2-201ENST00000264896 H3BMM0 161 aa13.59□□□□□ -0.23
SCARB2-201ENST00000264896 UBE2WQ96B02 151 aa13.59□□□□□ -0.23
SCARB2-201ENST00000264896 DAD1P61803 113 aa13.58□□□□□ -0.24
SCARB2-201ENST00000264896 SUMO4Q6EEV6 95 aa13.58□□□□□ -0.24
SCARB2-201ENST00000264896 U3KQE9 123 aa13.58□□□□□ -0.24
SCARB2-201ENST00000264896 GOLGB1Q14789 3259 aaKnown RBP13.58□□□□□ -0.24
SCARB2-201ENST00000264896 NUP210LQ5VU65 1888 aa13.58□□□□□ -0.24
SCARB2-201ENST00000264896 F5H768 121 aa13.58□□□□□ -0.24
SCARB2-201ENST00000264896 K7EMT4 169 aa13.58□□□□□ -0.24
SCARB2-201ENST00000264896 IGHG2P01859 326 aa13.58□□□□□ -0.24
SCARB2-201ENST00000264896 CCL25O15444 150 aa13.57□□□□□ -0.24
SCARB2-201ENST00000264896 LINC00322Q6ZN03 302 aaPredicted RBP13.57□□□□□ -0.24
SCARB2-201ENST00000264896 MLST8Q9BVC4 326 aa13.57□□□□□ -0.24
SCARB2-201ENST00000264896 SORL1Q92673 2214 aa13.57□□□□□ -0.24
SCARB2-201ENST00000264896 SPAG8Q99932 426 aaPredicted RBP13.56□□□□□ -0.24
SCARB2-201ENST00000264896 ZFP2Q6ZN57 461 aa13.56□□□□□ -0.24
SCARB2-201ENST00000264896 INAFM2P0DMQ5 153 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms