RNA–Protein interactions for RNA: ENST00000258418.9

CAB39-201, Transcript of calcium binding protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAB39, Length 3,826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-201ENST00000258418 SAP30O75446 220 aa11.3□□□□□ -0.6
CAB39-201ENST00000258418 HERVK_113P61574 105 aa11.29□□□□□ -0.6
CAB39-201ENST00000258418 ZNF815PA8K554 130 aa11.29□□□□□ -0.6
CAB39-201ENST00000258418 EDN2P20800 178 aa11.29□□□□□ -0.6
CAB39-201ENST00000258418 DPH3P1Q9H4G8 78 aa11.29□□□□□ -0.6
CAB39-201ENST00000258418 F8W735 103 aaPredicted RBP11.29□□□□□ -0.6
CAB39-201ENST00000258418 ZNF418Q8TF45 676 aaPredicted RBP11.29□□□□□ -0.6
CAB39-201ENST00000258418 FAM223BA6NKX1 122 aa11.28□□□□□ -0.6
CAB39-201ENST00000258418 DEFB131AP59861 70 aa11.28□□□□□ -0.6
CAB39-201ENST00000258418 FAM223AQ8IWN6 122 aa11.28□□□□□ -0.6
CAB39-201ENST00000258418 UBE2E2Q96LR5 201 aa11.28□□□□□ -0.6
CAB39-201ENST00000258418 C11orf21Q9P2W6 132 aa11.28□□□□□ -0.6
CAB39-201ENST00000258418 TAX1BP3O14907 124 aa11.28□□□□□ -0.6
CAB39-201ENST00000258418 SUMO2P61956 95 aaKnown RBP11.28□□□□□ -0.6
CAB39-201ENST00000258418 HSD52Q0P140 79 aa11.28□□□□□ -0.6
CAB39-201ENST00000258418 C2orf66Q6UXQ4 117 aa11.28□□□□□ -0.6
CAB39-201ENST00000258418 SYT8Q8NBV8 401 aa11.28□□□□□ -0.6
CAB39-201ENST00000258418 LINC01587Q99440 93 aa11.28□□□□□ -0.6
CAB39-201ENST00000258418 CHAC1Q9BUX1 264 aa11.28□□□□□ -0.6
CAB39-201ENST00000258418 NPC2P61916 151 aa11.27□□□□□ -0.6
CAB39-201ENST00000258418 RNASE13Q5GAN3 156 aaKnown RBP11.27□□□□□ -0.6
CAB39-201ENST00000258418 LINC01545Q5VT33 79 aa11.27□□□□□ -0.6
CAB39-201ENST00000258418 IGHV3-16A0A0C4DH30 117 aa11.27□□□□□ -0.61
CAB39-201ENST00000258418 NPIPB6E9PJ23 425 aa11.27□□□□□ -0.61
CAB39-201ENST00000258418 IGHV3-53P01767 116 aa11.27□□□□□ -0.61
CAB39-201ENST00000258418 MRPL16Q9NX20 251 aaKnown RBP11.27□□□□□ -0.61
CAB39-201ENST00000258418 ZNF876PQ49A33 203 aa11.27□□□□□ -0.61
CAB39-201ENST00000258418 OCIAD2Q56VL3 154 aa11.27□□□□□ -0.61
CAB39-201ENST00000258418 C20orf173Q96LM9 149 aa11.27□□□□□ -0.61
CAB39-201ENST00000258418 CD5LO43866 347 aa11.26□□□□□ -0.61
CAB39-201ENST00000258418 SAMD5Q5TGI4 173 aa11.26□□□□□ -0.61
CAB39-201ENST00000258418 AMTNQ6UX39 209 aa11.26□□□□□ -0.61
CAB39-201ENST00000258418 PHLDA1Q8WV24 401 aaPredicted RBP11.26□□□□□ -0.61
CAB39-201ENST00000258418 USMG5Q96IX5 58 aa11.26□□□□□ -0.61
CAB39-201ENST00000258418 ZFAND3Q9H8U3 227 aa11.26□□□□□ -0.61
CAB39-201ENST00000258418 SCRT2Q9NQ03 307 aa11.26□□□□□ -0.61
CAB39-201ENST00000258418 COL27A1Q8IZC6 1860 aaPredicted RBP11.25□□□□□ -0.61
CAB39-201ENST00000258418 LGALS3P17931 250 aaKnown RBP11.25□□□□□ -0.61
CAB39-201ENST00000258418 LGALS9BQ3B8N2 356 aa11.25□□□□□ -0.61
CAB39-201ENST00000258418 LGALS9CQ6DKI2 356 aa11.25□□□□□ -0.61
CAB39-201ENST00000258418 Q8N8P6 123 aa11.25□□□□□ -0.61
CAB39-201ENST00000258418 TP53TG1Q9Y2A0 90 aa11.25□□□□□ -0.61
CAB39-201ENST00000258418 HECTD1Q9ULT8 2610 aa11.25□□□□□ -0.61
CAB39-201ENST00000258418 CSMD1Q96PZ7 3565 aa11.25□□□□□ -0.61
CAB39-201ENST00000258418 NDUFA4O00483 81 aa11.25□□□□□ -0.61
CAB39-201ENST00000258418 C10orf105Q8TEF2 133 aa11.25□□□□□ -0.61
CAB39-201ENST00000258418 ORMDL2Q53FV1 153 aa11.24□□□□□ -0.61
CAB39-201ENST00000258418 MRPL52Q86TS9 123 aaKnown RBP11.24□□□□□ -0.61
CAB39-201ENST00000258418 SMIM2Q9BVW6 85 aa11.24□□□□□ -0.61
CAB39-201ENST00000258418 IGHV7-4-1A0A0J9YVY3 117 aa11.24□□□□□ -0.61
CAB39-201ENST00000258418 SEC11AP67812 179 aa11.24□□□□□ -0.61
CAB39-201ENST00000258418 PRR9Q5T870 116 aa11.24□□□□□ -0.61
CAB39-201ENST00000258418 DEFB125Q8N687 156 aa11.24□□□□□ -0.61
CAB39-201ENST00000258418 HOXA3O43365 443 aaPredicted RBP11.23□□□□□ -0.61
CAB39-201ENST00000258418 FLNBO75369 2602 aaKnown RBP11.23□□□□□ -0.61
CAB39-201ENST00000258418 IGHV3-38A0A0C4DH36 116 aa11.23□□□□□ -0.61
CAB39-201ENST00000258418 MRPS12O15235 138 aaKnown RBP11.23□□□□□ -0.61
CAB39-201ENST00000258418 AVPP01185 164 aa11.23□□□□□ -0.61
CAB39-201ENST00000258418 PRM2P04554 102 aa11.23□□□□□ -0.61
CAB39-201ENST00000258418 OR9G4Q8NGQ1 327 aa11.23□□□□□ -0.61
CAB39-201ENST00000258418 ZNF479Q96JC4 524 aa11.23□□□□□ -0.61
CAB39-201ENST00000258418 TNFRSF18Q9Y5U5 241 aa11.23□□□□□ -0.61
CAB39-201ENST00000258418 SLC25A16P16260 332 aa11.22□□□□□ -0.61
CAB39-201ENST00000258418 RPL39P62891 51 aaKnown RBP11.22□□□□□ -0.61
CAB39-201ENST00000258418 TCTEX1D4Q5JR98 221 aa11.22□□□□□ -0.61
CAB39-201ENST00000258418 HIST2H2BCQ6DN03 193 aa11.22□□□□□ -0.61
CAB39-201ENST00000258418 C16orf54Q6UWD8 224 aa11.22□□□□□ -0.61
CAB39-201ENST00000258418 KLHL30-AS1Q8NEE0 82 aa11.22□□□□□ -0.61
CAB39-201ENST00000258418 SDHAF1A6NFY7 115 aa11.22□□□□□ -0.61
CAB39-201ENST00000258418 Q8N6K4 173 aa11.22□□□□□ -0.61
CAB39-201ENST00000258418 XCL2Q9UBD3 114 aa11.22□□□□□ -0.61
CAB39-201ENST00000258418 SMPXQ9UHP9 88 aa11.22□□□□□ -0.61
CAB39-201ENST00000258418 CFAP46Q8IYW2 2715 aa11.22□□□□□ -0.61
CAB39-201ENST00000258418 IGKV2D-26A0A0A0MRZ7 120 aa11.22□□□□□ -0.61
CAB39-201ENST00000258418 TRAV8-2A0A0B4J237 113 aa11.21□□□□□ -0.61
CAB39-201ENST00000258418 FXYD2P54710 66 aa11.21□□□□□ -0.61
CAB39-201ENST00000258418 TRAV2A0A0B4J234 112 aa11.21□□□□□ -0.61
CAB39-201ENST00000258418 A0A1B0GWB2 263 aa11.21□□□□□ -0.61
CAB39-201ENST00000258418 ADARB2-AS1A8MUL3 147 aa11.21□□□□□ -0.61
CAB39-201ENST00000258418 SLURP1P55000 103 aa11.21□□□□□ -0.61
CAB39-201ENST00000258418 LINC01356Q8N9X3 169 aa11.21□□□□□ -0.61
CAB39-201ENST00000258418 LINC01559Q495D7 138 aa11.21□□□□□ -0.62
CAB39-201ENST00000258418 RAX2Q96IS3 184 aa11.21□□□□□ -0.62
CAB39-201ENST00000258418 H7C1H1 209 aa11.2□□□□□ -0.62
CAB39-201ENST00000258418 DUSP14O95147 198 aaKnown RBP11.2□□□□□ -0.62
CAB39-201ENST00000258418 IGLC6P0CF74 106 aa11.2□□□□□ -0.62
CAB39-201ENST00000258418 SMAGPQ0VAQ4 97 aa11.2□□□□□ -0.62
CAB39-201ENST00000258418 Q96MF0 132 aa11.2□□□□□ -0.62
CAB39-201ENST00000258418 GTSF1LQ9H1H1 148 aa11.2□□□□□ -0.62
CAB39-201ENST00000258418 CLPSL1A2RUU4 121 aa11.2□□□□□ -0.62
CAB39-201ENST00000258418 J3QR89 54 aa11.2□□□□□ -0.62
CAB39-201ENST00000258418 VCX2Q9H322 139 aa11.2□□□□□ -0.62
CAB39-201ENST00000258418 TMEM190Q8WZ59 177 aa11.19□□□□□ -0.62
CAB39-201ENST00000258418 TRBV25-1A0A075B6N4 114 aa11.19□□□□□ -0.62
CAB39-201ENST00000258418 APRG1Q8IVJ8 170 aa11.19□□□□□ -0.62
CAB39-201ENST00000258418 OPRPNQ99935 248 aaPredicted RBP11.19□□□□□ -0.62
CAB39-201ENST00000258418 PRADC1Q9BSG0 188 aa11.19□□□□□ -0.62
CAB39-201ENST00000258418 MDFICQ9P1T7 246 aa11.19□□□□□ -0.62
CAB39-201ENST00000258418 EBI3Q14213 229 aa11.19□□□□□ -0.62
CAB39-201ENST00000258418 RNF185Q96GF1 192 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms