RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 IL36BQ9NZH7 164 aa8.84□□□□□ -0.99
VPREB3-201ENST00000248948 DNAH17Q9UFH2 4485 aa8.84□□□□□ -0.99
VPREB3-201ENST00000248948 NBDYA0A0U1RRE5 68 aa8.83□□□□□ -1
VPREB3-201ENST00000248948 M0R2N4 97 aa8.83□□□□□ -1
VPREB3-201ENST00000248948 S100A4P26447 101 aaKnown RBP8.83□□□□□ -1
VPREB3-201ENST00000248948 CRIP1P50238 77 aa8.83□□□□□ -1
VPREB3-201ENST00000248948 MRPL23Q16540 153 aaKnown RBP8.83□□□□□ -1
VPREB3-201ENST00000248948 ESRGQ1W209 222 aa8.83□□□□□ -1
VPREB3-201ENST00000248948 TTC32Q5I0X7 151 aa8.83□□□□□ -1
VPREB3-201ENST00000248948 ZNF506Q5JVG8 444 aa8.83□□□□□ -1
VPREB3-201ENST00000248948 KRBOX1C9JBD0 128 aa8.82□□□□□ -1
VPREB3-201ENST00000248948 RS1O15537 224 aa8.82□□□□□ -1
VPREB3-201ENST00000248948 GATA1P15976 413 aaPredicted RBP8.82□□□□□ -1
VPREB3-201ENST00000248948 SRIP30626 198 aa8.82□□□□□ -1
VPREB3-201ENST00000248948 TAGLN2P37802 199 aaKnown RBP8.82□□□□□ -1
VPREB3-201ENST00000248948 MEF2BQ02080 365 aaPredicted RBP8.82□□□□□ -1
VPREB3-201ENST00000248948 MLST8Q9BVC4 326 aa8.82□□□□□ -1
VPREB3-201ENST00000248948 A0A1W2PPQ1 181 aa8.81□□□□□ -1
VPREB3-201ENST00000248948 A8MWV9 139 aa8.81□□□□□ -1
VPREB3-201ENST00000248948 H3BVH4 76 aa8.81□□□□□ -1
VPREB3-201ENST00000248948 K7EQD1 137 aa8.81□□□□□ -1
VPREB3-201ENST00000248948 M0R036 132 aa8.81□□□□□ -1
VPREB3-201ENST00000248948 RTL8CO15255 209 aa8.81□□□□□ -1
VPREB3-201ENST00000248948 PDE6DO43924 150 aa8.81□□□□□ -1
VPREB3-201ENST00000248948 CXCL1P09341 107 aa8.81□□□□□ -1
VPREB3-201ENST00000248948 BCL2P10415 239 aa8.81□□□□□ -1
VPREB3-201ENST00000248948 CCL20P78556 96 aa8.81□□□□□ -1
VPREB3-201ENST00000248948 RHOHQ15669 191 aa8.81□□□□□ -1
VPREB3-201ENST00000248948 CFAP126Q5VTH2 177 aa8.81□□□□□ -1
VPREB3-201ENST00000248948 NEGR1Q7Z3B1 354 aa8.81□□□□□ -1
VPREB3-201ENST00000248948 SMIM12Q96EX1 92 aa8.81□□□□□ -1
VPREB3-201ENST00000248948 TRBV6-4A0A1B0GX49 114 aa8.8□□□□□ -1
VPREB3-201ENST00000248948 PGPEP1LA6NFU8 196 aa8.8□□□□□ -1
VPREB3-201ENST00000248948 MED14OSP0DP75 135 aa8.8□□□□□ -1
VPREB3-201ENST00000248948 MGST1P10620 155 aaKnown RBP8.8□□□□□ -1
VPREB3-201ENST00000248948 GYPEP15421 78 aa8.8□□□□□ -1
VPREB3-201ENST00000248948 BTF3P20290 206 aaKnown RBP8.8□□□□□ -1
VPREB3-201ENST00000248948 RPL35P42766 123 aaKnown RBP8.8□□□□□ -1
VPREB3-201ENST00000248948 C1orf134Q5TEV5 83 aa8.8□□□□□ -1
VPREB3-201ENST00000248948 ZFP2Q6ZN57 461 aa8.8□□□□□ -1
VPREB3-201ENST00000248948 SH2D6Q7Z4S9 175 aa8.8□□□□□ -1
VPREB3-201ENST00000248948 BAGE2Q86Y30 109 aa8.8□□□□□ -1
VPREB3-201ENST00000248948 NHLRC2Q8NBF2 726 aa8.8□□□□□ -1
VPREB3-201ENST00000248948 SYT8Q8NBV8 401 aa8.8□□□□□ -1
VPREB3-201ENST00000248948 Q9H8V8 135 aa8.8□□□□□ -1
VPREB3-201ENST00000248948 PARLQ9H300 379 aa8.79□□□□□ -1
VPREB3-201ENST00000248948 SCRT2Q9NQ03 307 aa8.79□□□□□ -1
VPREB3-201ENST00000248948 VAX2Q9UIW0 290 aa8.79□□□□□ -1
VPREB3-201ENST00000248948 A0A1B0GVG6 124 aa8.78□□□□□ -1
VPREB3-201ENST00000248948 PRSS29PA6NIE9 313 aa8.78□□□□□ -1
VPREB3-201ENST00000248948 RHODO00212 210 aa8.78□□□□□ -1
VPREB3-201ENST00000248948 ARMS2P0C7Q2 107 aa8.78□□□□□ -1
VPREB3-201ENST00000248948 CENPWQ5EE01 88 aa8.78□□□□□ -1
VPREB3-201ENST00000248948 ALKAL2Q6UX46 152 aa8.78□□□□□ -1
VPREB3-201ENST00000248948 ZFP82Q8N141 532 aa8.78□□□□□ -1
VPREB3-201ENST00000248948 C6orf223Q8N319 242 aa8.78□□□□□ -1
VPREB3-201ENST00000248948 PRADC1Q9BSG0 188 aa8.78□□□□□ -1
VPREB3-201ENST00000248948 DERL1Q9BUN8 251 aa8.78□□□□□ -1
VPREB3-201ENST00000248948 PKHD1P08F94 4074 aa8.78□□□□□ -1
VPREB3-201ENST00000248948 PKD1P98161 4303 aa8.77□□□□□ -1.01
VPREB3-201ENST00000248948 SIVA1O15304 175 aa8.77□□□□□ -1.01
VPREB3-201ENST00000248948 NXPH4O95158 308 aa8.77□□□□□ -1.01
VPREB3-201ENST00000248948 TIRAPP58753 221 aa8.77□□□□□ -1.01
VPREB3-201ENST00000248948 BLOC1S1P78537 153 aa8.77□□□□□ -1.01
VPREB3-201ENST00000248948 LYPD5Q6UWN5 251 aa8.77□□□□□ -1.01
VPREB3-201ENST00000248948 SLC25A29Q8N8R3 303 aa8.77□□□□□ -1.01
VPREB3-201ENST00000248948 PHLDA3Q9Y5J5 127 aa8.77□□□□□ -1.01
VPREB3-201ENST00000248948 TMSB15BA0A087X1C1 80 aa8.76□□□□□ -1.01
VPREB3-201ENST00000248948 A0A1B0GVY2 172 aa8.76□□□□□ -1.01
VPREB3-201ENST00000248948 GRIFINA4D1Z8 144 aa8.76□□□□□ -1.01
VPREB3-201ENST00000248948 GNG4P50150 75 aa8.76□□□□□ -1.01
VPREB3-201ENST00000248948 PRR27Q6MZM9 219 aa8.76□□□□□ -1.01
VPREB3-201ENST00000248948 ZNF575Q86XF7 245 aa8.76□□□□□ -1.01
VPREB3-201ENST00000248948 KRTAP1-5Q9BYS1 174 aa8.76□□□□□ -1.01
VPREB3-201ENST00000248948 LOC100131303A0A0U1RQF7 123 aa8.75□□□□□ -1.01
VPREB3-201ENST00000248948 K7EP13 123 aa8.75□□□□□ -1.01
VPREB3-201ENST00000248948 NKX2-5P52952 324 aaPredicted RBP8.75□□□□□ -1.01
VPREB3-201ENST00000248948 DMRTA1Q5VZB9 504 aa8.75□□□□□ -1.01
VPREB3-201ENST00000248948 UFSP1Q6NVU6 142 aa8.75□□□□□ -1.01
VPREB3-201ENST00000248948 LYPD6BQ8NI32 183 aa8.75□□□□□ -1.01
VPREB3-201ENST00000248948 BOLA1Q9Y3E2 137 aa8.75□□□□□ -1.01
VPREB3-201ENST00000248948 TRBV20OR9-2A0A075B6H5 130 aa8.74□□□□□ -1.01
VPREB3-201ENST00000248948 IGHV3-73A0A0B4J1V6 119 aa8.74□□□□□ -1.01
VPREB3-201ENST00000248948 M0R381 172 aa8.74□□□□□ -1.01
VPREB3-201ENST00000248948 SNAI2O43623 268 aa8.74□□□□□ -1.01
VPREB3-201ENST00000248948 IGLV2-8P01709 118 aa8.74□□□□□ -1.01
VPREB3-201ENST00000248948 OR5AL1P0C617 328 aa8.74□□□□□ -1.01
VPREB3-201ENST00000248948 LINC00694P0DN24 101 aa8.74□□□□□ -1.01
VPREB3-201ENST00000248948 RPL19P84098 196 aaKnown RBP8.74□□□□□ -1.01
VPREB3-201ENST00000248948 SFRP2Q96HF1 295 aa8.74□□□□□ -1.01
VPREB3-201ENST00000248948 BIN3Q9NQY0 253 aa8.74□□□□□ -1.01
VPREB3-201ENST00000248948 MED9Q9NWA0 146 aa8.74□□□□□ -1.01
VPREB3-201ENST00000248948 C19orf71A6NCJ1 209 aa8.73□□□□□ -1.01
VPREB3-201ENST00000248948 TMEM250H0YL14 139 aa8.73□□□□□ -1.01
VPREB3-201ENST00000248948 DNAH10OSP0CZ25 163 aa8.73□□□□□ -1.01
VPREB3-201ENST00000248948 RPS20P60866 119 aaKnown RBP8.73□□□□□ -1.01
VPREB3-201ENST00000248948 SSBP4Q9BWG4 385 aaPredicted RBP8.73□□□□□ -1.01
VPREB3-201ENST00000248948 LY96Q9Y6Y9 160 aa8.73□□□□□ -1.01
VPREB3-201ENST00000248948 DNAH11Q96DT5 4516 aa8.73□□□□□ -1.01
VPREB3-201ENST00000248948 NDUFS6O75380 124 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms