RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 ZNF479Q96JC4 524 aa12.08□□□□□ -0.48
MRPL28-201ENST00000199706 LINC00588Q9Y4M8 146 aa12.08□□□□□ -0.48
MRPL28-201ENST00000199706 ICOSQ9Y6W8 199 aa12.08□□□□□ -0.48
MRPL28-201ENST00000199706 IGHV3-53P01767 116 aa12.07□□□□□ -0.48
MRPL28-201ENST00000199706 S100A4P26447 101 aaKnown RBP12.07□□□□□ -0.48
MRPL28-201ENST00000199706 VAX2Q9UIW0 290 aa12.07□□□□□ -0.48
MRPL28-201ENST00000199706 EPPK1P58107 5090 aaKnown RBP12.07□□□□□ -0.48
MRPL28-201ENST00000199706 RS1O15537 224 aa12.06□□□□□ -0.48
MRPL28-201ENST00000199706 MED14OSP0DP75 135 aa12.06□□□□□ -0.48
MRPL28-201ENST00000199706 MRPL23Q16540 153 aaKnown RBP12.06□□□□□ -0.48
MRPL28-201ENST00000199706 ZNF506Q5JVG8 444 aa12.06□□□□□ -0.48
MRPL28-201ENST00000199706 ALKAL2Q6UX46 152 aa12.06□□□□□ -0.48
MRPL28-201ENST00000199706 SCRT2Q9NQ03 307 aa12.06□□□□□ -0.48
MRPL28-201ENST00000199706 MRPS16Q9Y3D3 137 aaKnown RBP12.06□□□□□ -0.48
MRPL28-201ENST00000199706 A8MWV9 139 aa12.05□□□□□ -0.48
MRPL28-201ENST00000199706 C9JCJ5 164 aa12.05□□□□□ -0.48
MRPL28-201ENST00000199706 SFTA3P0C7M3 94 aa12.05□□□□□ -0.48
MRPL28-201ENST00000199706 GATA1P15976 413 aaPredicted RBP12.05□□□□□ -0.48
MRPL28-201ENST00000199706 CFAP126Q5VTH2 177 aa12.05□□□□□ -0.48
MRPL28-201ENST00000199706 ZFP2Q6ZN57 461 aa12.05□□□□□ -0.48
MRPL28-201ENST00000199706 SH2D6Q7Z4S9 175 aa12.05□□□□□ -0.48
MRPL28-201ENST00000199706 NDUFS6O75380 124 aaKnown RBP12.04□□□□□ -0.48
MRPL28-201ENST00000199706 ESRGQ1W209 222 aa12.04□□□□□ -0.48
MRPL28-201ENST00000199706 LINC00336Q6ZUF6 198 aa12.04□□□□□ -0.48
MRPL28-201ENST00000199706 ZNF575Q86XF7 245 aa12.04□□□□□ -0.48
MRPL28-201ENST00000199706 TRBV6-4A0A1B0GX49 114 aa12.03□□□□□ -0.48
MRPL28-201ENST00000199706 PGPEP1LA6NFU8 196 aa12.03□□□□□ -0.48
MRPL28-201ENST00000199706 H3BVH4 76 aa12.03□□□□□ -0.48
MRPL28-201ENST00000199706 M0R036 132 aa12.03□□□□□ -0.48
MRPL28-201ENST00000199706 NKX2-5P52952 324 aaPredicted RBP12.03□□□□□ -0.48
MRPL28-201ENST00000199706 CENPWQ5EE01 88 aa12.03□□□□□ -0.48
MRPL28-201ENST00000199706 NHLRC2Q8NBF2 726 aa12.03□□□□□ -0.48
MRPL28-201ENST00000199706 SYT8Q8NBV8 401 aa12.03□□□□□ -0.48
MRPL28-201ENST00000199706 PCNPQ8WW12 178 aaKnown RBP12.03□□□□□ -0.48
MRPL28-201ENST00000199706 DERL1Q9BUN8 251 aa12.03□□□□□ -0.48
MRPL28-201ENST00000199706 DNAH2Q9P225 4427 aa12.02□□□□□ -0.49
MRPL28-201ENST00000199706 K7EQD1 137 aa12.02□□□□□ -0.49
MRPL28-201ENST00000199706 ARMS2P0C7Q2 107 aa12.02□□□□□ -0.49
MRPL28-201ENST00000199706 MGST1P10620 155 aaKnown RBP12.02□□□□□ -0.49
MRPL28-201ENST00000199706 BTF3P20290 206 aaKnown RBP12.02□□□□□ -0.49
MRPL28-201ENST00000199706 NEGR1Q7Z3B1 354 aa12.02□□□□□ -0.49
MRPL28-201ENST00000199706 HECTD4Q9Y4D8 3996 aa12.02□□□□□ -0.49
MRPL28-201ENST00000199706 NBDYA0A0U1RRE5 68 aa12.01□□□□□ -0.49
MRPL28-201ENST00000199706 A0A1W2PPQ1 181 aa12.01□□□□□ -0.49
MRPL28-201ENST00000199706 TMEM250H0YL14 139 aa12.01□□□□□ -0.49
MRPL28-201ENST00000199706 RHODO00212 210 aa12.01□□□□□ -0.49
MRPL28-201ENST00000199706 NXPH4O95158 308 aa12.01□□□□□ -0.49
MRPL28-201ENST00000199706 SRIP30626 198 aa12.01□□□□□ -0.49
MRPL28-201ENST00000199706 GNG4P50150 75 aa12.01□□□□□ -0.49
MRPL28-201ENST00000199706 TIRAPP58753 221 aa12.01□□□□□ -0.49
MRPL28-201ENST00000199706 RHOHQ15669 191 aa12.01□□□□□ -0.49
MRPL28-201ENST00000199706 TTC32Q5I0X7 151 aa12.01□□□□□ -0.49
MRPL28-201ENST00000199706 PARLQ9H300 379 aa12.01□□□□□ -0.49
MRPL28-201ENST00000199706 BIN3Q9NQY0 253 aa12.01□□□□□ -0.49
MRPL28-201ENST00000199706 IGLV2-8P01709 118 aa12□□□□□ -0.49
MRPL28-201ENST00000199706 GYPEP15421 78 aa12□□□□□ -0.49
MRPL28-201ENST00000199706 SOHLH1Q5JUK2 328 aa12□□□□□ -0.49
MRPL28-201ENST00000199706 ZFP82Q8N141 532 aa12□□□□□ -0.49
MRPL28-201ENST00000199706 SSBP4Q9BWG4 385 aaPredicted RBP12□□□□□ -0.49
MRPL28-201ENST00000199706 Q9H8V8 135 aa12□□□□□ -0.49
MRPL28-201ENST00000199706 MED9Q9NWA0 146 aa12□□□□□ -0.49
MRPL28-201ENST00000199706 BOLA1Q9Y3E2 137 aa12□□□□□ -0.49
MRPL28-201ENST00000199706 PHLDA3Q9Y5J5 127 aa12□□□□□ -0.49
MRPL28-201ENST00000199706 DNAH17Q9UFH2 4485 aa12□□□□□ -0.49
MRPL28-201ENST00000199706 TRBV20OR9-2A0A075B6H5 130 aa11.99□□□□□ -0.49
MRPL28-201ENST00000199706 IGLV2-18A0A075B6J9 118 aa11.99□□□□□ -0.49
MRPL28-201ENST00000199706 OR5AL1P0C617 328 aa11.99□□□□□ -0.49
MRPL28-201ENST00000199706 UFSP1Q6NVU6 142 aa11.99□□□□□ -0.49
MRPL28-201ENST00000199706 SLC25A29Q8N8R3 303 aa11.99□□□□□ -0.49
MRPL28-201ENST00000199706 PRADC1Q9BSG0 188 aa11.99□□□□□ -0.49
MRPL28-201ENST00000199706 BIRC6Q9NR09 4857 aa11.98□□□□□ -0.49
MRPL28-201ENST00000199706 FAT2Q9NYQ8 4349 aa11.98□□□□□ -0.49
MRPL28-201ENST00000199706 GRIFINA4D1Z8 144 aa11.98□□□□□ -0.49
MRPL28-201ENST00000199706 C19orf71A6NCJ1 209 aa11.98□□□□□ -0.49
MRPL28-201ENST00000199706 RBFOX3A6NFN3 312 aa11.98□□□□□ -0.49
MRPL28-201ENST00000199706 SNAI2O43623 268 aa11.98□□□□□ -0.49
MRPL28-201ENST00000199706 LYPD5Q6UWN5 251 aa11.98□□□□□ -0.49
MRPL28-201ENST00000199706 SFRP2Q96HF1 295 aa11.98□□□□□ -0.49
MRPL28-201ENST00000199706 K7EP13 123 aa11.97□□□□□ -0.49
MRPL28-201ENST00000199706 M0R2N4 97 aa11.97□□□□□ -0.49
MRPL28-201ENST00000199706 RPS20P60866 119 aaKnown RBP11.97□□□□□ -0.49
MRPL28-201ENST00000199706 DMRTA1Q5VZB9 504 aa11.97□□□□□ -0.49
MRPL28-201ENST00000199706 PRR27Q6MZM9 219 aa11.97□□□□□ -0.49
MRPL28-201ENST00000199706 TMSB15BA0A087X1C1 80 aa11.96□□□□□ -0.49
MRPL28-201ENST00000199706 RAB19A4D1S5 217 aa11.96□□□□□ -0.49
MRPL28-201ENST00000199706 RTL8CO15255 209 aa11.96□□□□□ -0.49
MRPL28-201ENST00000199706 C1orf134Q5TEV5 83 aa11.96□□□□□ -0.49
MRPL28-201ENST00000199706 RPL19P84098 196 aaKnown RBP11.95□□□□□ -0.5
MRPL28-201ENST00000199706 DAZAP1Q96EP5 407 aaKnown RBP11.95□□□□□ -0.5
MRPL28-201ENST00000199706 XKRY2A2RUG3 117 aa11.94□□□□□ -0.5
MRPL28-201ENST00000199706 SIVA1O15304 175 aa11.94□□□□□ -0.5
MRPL28-201ENST00000199706 LINC00694P0DN24 101 aa11.94□□□□□ -0.5
MRPL28-201ENST00000199706 FAM210AQ96ND0 272 aa11.94□□□□□ -0.5
MRPL28-201ENST00000199706 M0R381 172 aa11.93□□□□□ -0.5
MRPL28-201ENST00000199706 CRYGDP07320 174 aa11.93□□□□□ -0.5
MRPL28-201ENST00000199706 IGLC6P0CF74 106 aa11.93□□□□□ -0.5
MRPL28-201ENST00000199706 TEX261Q6UWH6 196 aa11.93□□□□□ -0.5
MRPL28-201ENST00000199706 C6orf223Q8N319 242 aa11.93□□□□□ -0.5
MRPL28-201ENST00000199706 LY96Q9Y6Y9 160 aa11.93□□□□□ -0.5
MRPL28-201ENST00000199706 IGHV3-73A0A0B4J1V6 119 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms