RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 GAGE13Q4V321 117 aa10.48□□□□□ -0.73
PAX6-280ENST00000640872 VMO1Q7Z5L0 202 aa10.48□□□□□ -0.73
PAX6-280ENST00000640872 SMIM2Q9BVW6 85 aa10.48□□□□□ -0.73
PAX6-280ENST00000640872 CFAP46Q8IYW2 2715 aa10.48□□□□□ -0.73
PAX6-280ENST00000640872 IGHV3-66A0A0C4DH42 116 aa10.48□□□□□ -0.73
PAX6-280ENST00000640872 MYMXA0A1B0GTQ4 84 aa10.48□□□□□ -0.73
PAX6-280ENST00000640872 LY6HO94772 140 aa10.48□□□□□ -0.73
PAX6-280ENST00000640872 TMEM78Q5T7P6 136 aa10.48□□□□□ -0.73
PAX6-280ENST00000640872 Q6ZQT7 251 aa10.48□□□□□ -0.73
PAX6-280ENST00000640872 MRPL53Q96EL3 112 aaKnown RBP10.48□□□□□ -0.73
PAX6-280ENST00000640872 MRAP2Q96G30 205 aa10.48□□□□□ -0.73
PAX6-280ENST00000640872 FAM90A27PA6NNH2 459 aa10.47□□□□□ -0.73
PAX6-280ENST00000640872 KLK9Q2XQG4 91 aa10.47□□□□□ -0.73
PAX6-280ENST00000640872 FAM110DQ8TAY7 271 aaPredicted RBP10.47□□□□□ -0.73
PAX6-280ENST00000640872 VKORC1Q9BQB6 163 aa10.47□□□□□ -0.73
PAX6-280ENST00000640872 KLK9Q9UKQ9 250 aa10.47□□□□□ -0.73
PAX6-280ENST00000640872 OOSP1A8MZH6 123 aa10.47□□□□□ -0.73
PAX6-280ENST00000640872 OR11H12B2RN74 326 aa10.47□□□□□ -0.73
PAX6-280ENST00000640872 CLEC3BP05452 202 aa10.47□□□□□ -0.73
PAX6-280ENST00000640872 SPANXN1Q5VSR9 72 aa10.47□□□□□ -0.73
PAX6-280ENST00000640872 MORN3Q6PF18 240 aaPredicted RBP10.47□□□□□ -0.73
PAX6-280ENST00000640872 C9orf47Q6ZRZ4 202 aa10.47□□□□□ -0.73
PAX6-280ENST00000640872 Q8N9W7 124 aa10.47□□□□□ -0.73
PAX6-280ENST00000640872 OR11H1Q8NG94 326 aa10.47□□□□□ -0.73
PAX6-280ENST00000640872 OR11H2Q8NH07 326 aa10.47□□□□□ -0.73
PAX6-280ENST00000640872 AKAP6Q13023 2319 aa10.47□□□□□ -0.73
PAX6-280ENST00000640872 MTURNQ8N3F0 131 aa10.46□□□□□ -0.73
PAX6-280ENST00000640872 HIF1ANQ9NWT6 349 aa10.46□□□□□ -0.73
PAX6-280ENST00000640872 PIEZO1Q92508 2521 aa10.46□□□□□ -0.73
PAX6-280ENST00000640872 HIVEP3Q5T1R4 2406 aa10.46□□□□□ -0.73
PAX6-280ENST00000640872 ZFHX3Q15911 3703 aa10.46□□□□□ -0.74
PAX6-280ENST00000640872 LGALS1P09382 135 aaKnown RBP10.46□□□□□ -0.74
PAX6-280ENST00000640872 NEXN-AS1Q8NBZ9 246 aa10.46□□□□□ -0.74
PAX6-280ENST00000640872 TOMM6Q96B49 74 aa10.46□□□□□ -0.74
PAX6-280ENST00000640872 CCDC140Q96MF4 163 aa10.46□□□□□ -0.74
PAX6-280ENST00000640872 H3BVH4 76 aa10.45□□□□□ -0.74
PAX6-280ENST00000640872 SLC25A16P16260 332 aa10.45□□□□□ -0.74
PAX6-280ENST00000640872 INSL3P51460 131 aa10.45□□□□□ -0.74
PAX6-280ENST00000640872 C8orf86Q6ZUL3 223 aa10.45□□□□□ -0.74
PAX6-280ENST00000640872 MED13LQ71F56 2210 aa10.45□□□□□ -0.74
PAX6-280ENST00000640872 IGHV3OR16-13A0A075B7E8 117 aa10.45□□□□□ -0.74
PAX6-280ENST00000640872 IGHV3-74A0A0B4J1X5 117 aa10.45□□□□□ -0.74
PAX6-280ENST00000640872 ORMDL2Q53FV1 153 aa10.45□□□□□ -0.74
PAX6-280ENST00000640872 MINOS1Q5TGZ0 78 aa10.45□□□□□ -0.74
PAX6-280ENST00000640872 TIMD4Q96H15 378 aa10.45□□□□□ -0.74
PAX6-280ENST00000640872 SCGB3A1Q96QR1 104 aa10.45□□□□□ -0.74
PAX6-280ENST00000640872 MINOS1-NBL1R4GNA1 71 aa10.45□□□□□ -0.74
PAX6-280ENST00000640872 ECSCRQ19T08 205 aa10.44□□□□□ -0.74
PAX6-280ENST00000640872 PRR9Q5T870 116 aa10.44□□□□□ -0.74
PAX6-280ENST00000640872 ATP6V0BQ99437 205 aa10.44□□□□□ -0.74
PAX6-280ENST00000640872 CYSLTR1Q9Y271 337 aa10.44□□□□□ -0.74
PAX6-280ENST00000640872 PKD1L2Q7Z442 2459 aa10.44□□□□□ -0.74
PAX6-280ENST00000640872 C1orf122Q6ZSJ8 110 aa10.44□□□□□ -0.74
PAX6-280ENST00000640872 CELSR1Q9NYQ6 3014 aa10.43□□□□□ -0.74
PAX6-280ENST00000640872 NDUFS8O00217 210 aa10.43□□□□□ -0.74
PAX6-280ENST00000640872 CCL21O00585 134 aa10.43□□□□□ -0.74
PAX6-280ENST00000640872 HOXA3O43365 443 aaPredicted RBP10.43□□□□□ -0.74
PAX6-280ENST00000640872 SUMO2P61956 95 aaKnown RBP10.43□□□□□ -0.74
PAX6-280ENST00000640872 CLEC19AQ6UXS0 136 aa10.43□□□□□ -0.74
PAX6-280ENST00000640872 RASL10AQ92737 203 aa10.43□□□□□ -0.74
PAX6-280ENST00000640872 KLK15Q9H2R5 256 aa10.43□□□□□ -0.74
PAX6-280ENST00000640872 IGHV3-49A0A0A0MS15 119 aa10.43□□□□□ -0.74
PAX6-280ENST00000640872 A0A1B0GV72 72 aa10.43□□□□□ -0.74
PAX6-280ENST00000640872 ATP6V0E1O15342 81 aa10.43□□□□□ -0.74
PAX6-280ENST00000640872 C20orf78Q9BR46 151 aa10.43□□□□□ -0.74
PAX6-280ENST00000640872 U3KQE9 123 aa10.43□□□□□ -0.74
PAX6-280ENST00000640872 FLNCQ14315 2725 aa10.42□□□□□ -0.74
PAX6-280ENST00000640872 RNF223E7ERA6 249 aa10.42□□□□□ -0.74
PAX6-280ENST00000640872 BAALCQ8WXS3 180 aa10.42□□□□□ -0.74
PAX6-280ENST00000640872 METTL26Q96S19 204 aa10.42□□□□□ -0.74
PAX6-280ENST00000640872 PRADC1Q9BSG0 188 aa10.42□□□□□ -0.74
PAX6-280ENST00000640872 PGPEP1Q9NXJ5 209 aa10.42□□□□□ -0.74
PAX6-280ENST00000640872 CENPVL3A0A0U1RRI6 287 aa10.41□□□□□ -0.74
PAX6-280ENST00000640872 CFAP126Q5VTH2 177 aa10.41□□□□□ -0.74
PAX6-280ENST00000640872 LCNL1Q6ZST4 164 aa10.41□□□□□ -0.74
PAX6-280ENST00000640872 SMCPP49901 116 aaPredicted RBP10.41□□□□□ -0.74
PAX6-280ENST00000640872 ADORA2A-AS1P86434 159 aa10.41□□□□□ -0.74
PAX6-280ENST00000640872 ATP5G2Q06055 141 aa10.41□□□□□ -0.74
PAX6-280ENST00000640872 ATP6V0E2Q8NHE4 81 aa10.41□□□□□ -0.74
PAX6-280ENST00000640872 RPL39LQ96EH5 51 aaKnown RBP10.41□□□□□ -0.74
PAX6-280ENST00000640872 APOMO95445 188 aa10.4□□□□□ -0.74
PAX6-280ENST00000640872 COX6B1P14854 86 aa10.4□□□□□ -0.74
PAX6-280ENST00000640872 UBE2D1P51668 147 aa10.4□□□□□ -0.74
PAX6-280ENST00000640872 C2orf66Q6UXQ4 117 aa10.4□□□□□ -0.74
PAX6-280ENST00000640872 C1QTNF4Q9BXJ3 329 aa10.4□□□□□ -0.74
PAX6-280ENST00000640872 LENEPQ9Y5L5 61 aa10.4□□□□□ -0.74
PAX6-280ENST00000640872 UTP20O75691 2785 aaKnown RBP10.4□□□□□ -0.74
PAX6-280ENST00000640872 WNK2Q9Y3S1 2297 aa10.4□□□□□ -0.74
PAX6-280ENST00000640872 IGF1P05019 195 aa10.4□□□□□ -0.74
PAX6-280ENST00000640872 UCNP55089 124 aa10.4□□□□□ -0.74
PAX6-280ENST00000640872 FOXI1Q12951 378 aa10.4□□□□□ -0.74
PAX6-280ENST00000640872 TCTEX1D4Q5JR98 221 aa10.4□□□□□ -0.74
PAX6-280ENST00000640872 ITLN2Q8WWU7 325 aaPredicted RBP10.4□□□□□ -0.74
PAX6-280ENST00000640872 EEF1AKMT3Q96AZ1 226 aa10.4□□□□□ -0.74
PAX6-280ENST00000640872 MRPL16Q9NX20 251 aaKnown RBP10.4□□□□□ -0.74
PAX6-280ENST00000640872 PRSS29PA6NIE9 313 aa10.39□□□□□ -0.75
PAX6-280ENST00000640872 ZNF815PA8K554 130 aa10.39□□□□□ -0.75
PAX6-280ENST00000640872 M0R381 172 aa10.39□□□□□ -0.75
PAX6-280ENST00000640872 DLX4Q92988 240 aaPredicted RBP10.39□□□□□ -0.75
PAX6-280ENST00000640872 PLEKHB2Q96CS7 222 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms