RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 CITED1Q99966 193 aa3.62□□□□□ -1.83
CHD9-221ENST00000615216 PLA2G2CQ5R387 149 aa3.62□□□□□ -1.83
CHD9-221ENST00000615216 SELENOKQ9Y6D0 94 aa3.62□□□□□ -1.83
CHD9-221ENST00000615216 K7EP13 123 aa3.62□□□□□ -1.83
CHD9-221ENST00000615216 Q96MF0 132 aa3.62□□□□□ -1.83
CHD9-221ENST00000615216 NCOR1O75376 2440 aa3.62□□□□□ -1.83
CHD9-221ENST00000615216 SP5Q6BEB4 398 aaPredicted RBP3.62□□□□□ -1.83
CHD9-221ENST00000615216 IGF2-ASQ6U949 168 aa3.62□□□□□ -1.83
CHD9-221ENST00000615216 SLC25A29Q8N8R3 303 aa3.62□□□□□ -1.83
CHD9-221ENST00000615216 ZNF625Q96I27 306 aaPredicted RBP3.62□□□□□ -1.83
CHD9-221ENST00000615216 SCRT2Q9NQ03 307 aa3.62□□□□□ -1.83
CHD9-221ENST00000615216 VPREB3Q9UKI3 123 aa3.62□□□□□ -1.83
CHD9-221ENST00000615216 ARTNQ5T4W7 220 aa3.61□□□□□ -1.83
CHD9-221ENST00000615216 CARD19Q96LW7 228 aa3.61□□□□□ -1.83
CHD9-221ENST00000615216 ZNRD1Q9P1U0 126 aa3.61□□□□□ -1.83
CHD9-221ENST00000615216 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.61□□□□□ -1.831e-6■■■■□ 25.3
CHD9-221ENST00000615216 IGLC7A0M8Q6 106 aa3.61□□□□□ -1.83
CHD9-221ENST00000615216 CFHR4Q92496 578 aa3.61□□□□□ -1.83
CHD9-221ENST00000615216 MRPL35Q9NZE8 188 aaKnown RBP3.61□□□□□ -1.83
CHD9-221ENST00000615216 MALRD1Q5VYJ5 2156 aa3.61□□□□□ -1.83
CHD9-221ENST00000615216 G3V318 75 aa3.61□□□□□ -1.83
CHD9-221ENST00000615216 Q6ZVH6 145 aa3.61□□□□□ -1.83
CHD9-221ENST00000615216 IGHV3-16A0A0C4DH30 117 aa3.61□□□□□ -1.83
CHD9-221ENST00000615216 A0A1B0GUS0 222 aa3.61□□□□□ -1.83
CHD9-221ENST00000615216 LHBP01229 141 aa3.61□□□□□ -1.83
CHD9-221ENST00000615216 GAGE6Q13070 117 aa3.61□□□□□ -1.83
CHD9-221ENST00000615216 DSCAMO60469 2012 aa3.61□□□□□ -1.83
CHD9-221ENST00000615216 K7EN84 100 aa3.61□□□□□ -1.83
CHD9-221ENST00000615216 NPYP01303 97 aa3.61□□□□□ -1.83
CHD9-221ENST00000615216 PRR20EP86478 221 aa3.61□□□□□ -1.83
CHD9-221ENST00000615216 PRR20CP86479 221 aa3.61□□□□□ -1.83
CHD9-221ENST00000615216 PRR20DP86480 221 aa3.61□□□□□ -1.83
CHD9-221ENST00000615216 PRR20BP86481 221 aa3.61□□□□□ -1.83
CHD9-221ENST00000615216 PRR20AP86496 221 aa3.61□□□□□ -1.83
CHD9-221ENST00000615216 C16orf74Q96GX8 76 aa3.61□□□□□ -1.83
CHD9-221ENST00000615216 LY6HO94772 140 aa3.61□□□□□ -1.83
CHD9-221ENST00000615216 ZNRF2Q8NHG8 242 aa3.61□□□□□ -1.83
CHD9-221ENST00000615216 RSPO3Q9BXY4 272 aaPredicted RBP3.61□□□□□ -1.83
CHD9-221ENST00000615216 PRSS29PA6NIE9 313 aa3.61□□□□□ -1.83
CHD9-221ENST00000615216 CFHR3Q02985 330 aa3.61□□□□□ -1.83
CHD9-221ENST00000615216 ORMDL1Q9P0S3 153 aa3.61□□□□□ -1.83
CHD9-221ENST00000615216 DAZ2Q13117 558 aaKnown RBP3.61□□□□□ -1.83
CHD9-221ENST00000615216 DAZ4Q86SG3 579 aaKnown RBP3.61□□□□□ -1.83
CHD9-221ENST00000615216 DEFB104AQ8WTQ1 72 aa3.61□□□□□ -1.83
CHD9-221ENST00000615216 DAZ3Q9NR90 486 aaKnown RBP3.61□□□□□ -1.83
CHD9-221ENST00000615216 GAGE7O76087 117 aa3.6□□□□□ -1.83
CHD9-221ENST00000615216 GAGE12FP0CL80 117 aa3.6□□□□□ -1.83
CHD9-221ENST00000615216 GAGE12GP0CL81 117 aa3.6□□□□□ -1.83
CHD9-221ENST00000615216 GAGE12IP0CL82 117 aa3.6□□□□□ -1.83
CHD9-221ENST00000615216 IGLL1P15814 213 aa3.6□□□□□ -1.83
CHD9-221ENST00000615216 IL15RAQ13261 267 aa3.6□□□□□ -1.83
CHD9-221ENST00000615216 PIP4P1Q86T03 277 aa3.6□□□□□ -1.83
CHD9-221ENST00000615216 ANKRD29Q8N6D5 301 aa3.6□□□□□ -1.83
CHD9-221ENST00000615216 NOTCH3Q9UM47 2321 aa3.6□□□□□ -1.83
CHD9-221ENST00000615216 PFN2P35080 140 aa3.6□□□□□ -1.83
CHD9-221ENST00000615216 PRR30Q53SZ7 412 aaPredicted RBP3.6□□□□□ -1.83
CHD9-221ENST00000615216 TPSG1Q9NRR2 321 aa3.6□□□□□ -1.83
CHD9-221ENST00000615216 TRAV12-2A0A075B6T6 113 aa3.6□□□□□ -1.83
CHD9-221ENST00000615216 LRP4O75096 1905 aa3.6□□□□□ -1.83
CHD9-221ENST00000615216 GAGE12HA6NDE8 117 aa3.6□□□□□ -1.83
CHD9-221ENST00000615216 KNCNA6PVL3 124 aa3.6□□□□□ -1.83
CHD9-221ENST00000615216 C22orf46C9J442 243 aa3.6□□□□□ -1.83
CHD9-221ENST00000615216 ZNF503-AS2A6NEH8 195 aa3.6□□□□□ -1.83
CHD9-221ENST00000615216 TMEM258P61165 79 aa3.6□□□□□ -1.83
CHD9-221ENST00000615216 MORN5Q5VZ52 161 aa3.6□□□□□ -1.83
CHD9-221ENST00000615216 ZMAT4Q9H898 229 aa3.6□□□□□ -1.83
CHD9-221ENST00000615216 FAM215AQ9Y5M1 114 aa3.6□□□□□ -1.83
CHD9-221ENST00000615216 KIR2DL5BA0A0G2JN68 375 aa3.6□□□□□ -1.83
CHD9-221ENST00000615216 KIR2DL5BA0A0G2JPC4 375 aa3.6□□□□□ -1.83
CHD9-221ENST00000615216 C12orf74Q32Q52 190 aa3.6□□□□□ -1.83
CHD9-221ENST00000615216 KIR2DL5AQ8N109 375 aa3.6□□□□□ -1.83
CHD9-221ENST00000615216 DYNAPQ8N1N2 210 aa3.6□□□□□ -1.83
CHD9-221ENST00000615216 ZNF491Q8N8L2 437 aa3.6□□□□□ -1.83
CHD9-221ENST00000615216 COL5A1P20908 1838 aaPredicted RBP3.59□□□□□ -1.83
CHD9-221ENST00000615216 EXPH5Q8NEV8 1989 aa3.59□□□□□ -1.83
CHD9-221ENST00000615216 K7EQD1 137 aa3.59□□□□□ -1.83
CHD9-221ENST00000615216 K7ERJ3 54 aa3.59□□□□□ -1.83
CHD9-221ENST00000615216 MED14OSP0DP75 135 aa3.59□□□□□ -1.83
CHD9-221ENST00000615216 RSPO1Q2MKA7 263 aaPredicted RBP3.59□□□□□ -1.83
CHD9-221ENST00000615216 ANGP03950 147 aaKnown RBP3.59□□□□□ -1.83
CHD9-221ENST00000615216 GP9P14770 177 aa3.59□□□□□ -1.83
CHD9-221ENST00000615216 IGF2BP2-AS1Q96M15 143 aa3.59□□□□□ -1.83
CHD9-221ENST00000615216 TRAV25A0A0B4J276 109 aa3.59□□□□□ -1.83
CHD9-221ENST00000615216 CR1LQ2VPA4 569 aa3.59□□□□□ -1.83
CHD9-221ENST00000615216 FAM120AOSQ5T036 256 aa3.59□□□□□ -1.83
CHD9-221ENST00000615216 DUX4L9Q6RFH8 374 aaPredicted RBP3.59□□□□□ -1.83
CHD9-221ENST00000615216 Q6ZSR3 168 aa3.59□□□□□ -1.83
CHD9-221ENST00000615216 TRBV6-1A0A0K0K1D8 114 aa3.59□□□□□ -1.84
CHD9-221ENST00000615216 ZNF747Q9BV97 191 aa3.59□□□□□ -1.84
CHD9-221ENST00000615216 COA6Q5JTJ3 125 aaKnown RBP3.59□□□□□ -1.84
CHD9-221ENST00000615216 C9orf66Q5T8R8 295 aa3.59□□□□□ -1.84
CHD9-221ENST00000615216 TRAV12-1A0A0B4J245 112 aa3.58□□□□□ -1.84
CHD9-221ENST00000615216 IGHV3-38A0A0C4DH36 116 aa3.58□□□□□ -1.84
CHD9-221ENST00000615216 hADV29S1A0JD25 119 aa3.58□□□□□ -1.84
CHD9-221ENST00000615216 CFC1BP0CG36 223 aa3.58□□□□□ -1.84
CHD9-221ENST00000615216 CFC1P0CG37 223 aa3.58□□□□□ -1.84
CHD9-221ENST00000615216 EGR2P11161 476 aaPredicted RBP3.58□□□□□ -1.84
CHD9-221ENST00000615216 C11orf53Q8IXP5 236 aa3.58□□□□□ -1.84
CHD9-221ENST00000615216 H0YGX0 51 aa3.58□□□□□ -1.84
CHD9-221ENST00000615216 SLX1AQ9BQ83 275 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms