RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 PCNX2A6NKB5 2137 aa11.55□□□□□ -0.56
SNPH-203ENST00000614659 C10orf142B7Z368 130 aa11.55□□□□□ -0.56
SNPH-203ENST00000614659 IGLV11-55A0A075B6I3 123 aa11.55□□□□□ -0.56
SNPH-203ENST00000614659 IGLV2-23P01705 113 aa11.55□□□□□ -0.56
SNPH-203ENST00000614659 ANXA2RQ3ZCQ2 193 aa11.55□□□□□ -0.56
SNPH-203ENST00000614659 PRIMA1Q86XR5 153 aa11.54□□□□□ -0.56
SNPH-203ENST00000614659 DIDO1Q9BTC0 2240 aaKnown RBP11.54□□□□□ -0.56
SNPH-203ENST00000614659 ODF3L1Q8IXM7 274 aa11.54□□□□□ -0.56
SNPH-203ENST00000614659 FAM167A-AS1Q96KT0 104 aa11.54□□□□□ -0.56
SNPH-203ENST00000614659 ZNF493Q6ZR52 646 aa11.54□□□□□ -0.56
SNPH-203ENST00000614659 SEM1Q6ZVN7 128 aa11.54□□□□□ -0.56
SNPH-203ENST00000614659 NUP210LQ5VU65 1888 aa11.53□□□□□ -0.56
SNPH-203ENST00000614659 HEATR1Q9H583 2144 aaKnown RBP11.53□□□□□ -0.56
SNPH-203ENST00000614659 F8VRH5 84 aa11.53□□□□□ -0.56
SNPH-203ENST00000614659 MYCNOSP40205 109 aa11.53□□□□□ -0.56
SNPH-203ENST00000614659 CLPSL1A2RUU4 121 aa11.53□□□□□ -0.56
SNPH-203ENST00000614659 K7EIM0 57 aa11.53□□□□□ -0.56
SNPH-203ENST00000614659 CRIP3Q6Q6R5 217 aa11.53□□□□□ -0.56
SNPH-203ENST00000614659 ZNF747Q9BV97 191 aa11.53□□□□□ -0.56
SNPH-203ENST00000614659 ALPK3Q96L96 1907 aa11.53□□□□□ -0.56
SNPH-203ENST00000614659 AZU1P20160 251 aa11.53□□□□□ -0.56
SNPH-203ENST00000614659 UTF1Q5T230 341 aa11.53□□□□□ -0.56
SNPH-203ENST00000614659 PATE2Q6UY27 113 aa11.53□□□□□ -0.56
SNPH-203ENST00000614659 PKIGQ9Y2B9 76 aa11.53□□□□□ -0.56
SNPH-203ENST00000614659 WI2-2373I1.2A0A1W2PRP0 233 aa11.52□□□□□ -0.56
SNPH-203ENST00000614659 DEFB130BP0DP73 79 aa11.52□□□□□ -0.57
SNPH-203ENST00000614659 DEFB130AP0DP74 79 aa11.52□□□□□ -0.57
SNPH-203ENST00000614659 ABCA4P78363 2273 aa11.52□□□□□ -0.57
SNPH-203ENST00000614659 F5H768 121 aa11.52□□□□□ -0.57
SNPH-203ENST00000614659 CRYGCP07315 174 aa11.52□□□□□ -0.57
SNPH-203ENST00000614659 ZNF625Q96I27 306 aaPredicted RBP11.52□□□□□ -0.57
SNPH-203ENST00000614659 SOCS3O14543 225 aa11.52□□□□□ -0.57
SNPH-203ENST00000614659 C1orf159Q96HA4 380 aa11.52□□□□□ -0.57
SNPH-203ENST00000614659 SS18Q15532 418 aa11.51□□□□□ -0.57
SNPH-203ENST00000614659 SDHAF1A6NFY7 115 aa11.51□□□□□ -0.57
SNPH-203ENST00000614659 RHOHQ15669 191 aa11.51□□□□□ -0.57
SNPH-203ENST00000614659 C6orf226Q5I0X4 101 aa11.51□□□□□ -0.57
SNPH-203ENST00000614659 CDPF1Q6NVV7 123 aa11.51□□□□□ -0.57
SNPH-203ENST00000614659 KIAA2026Q5HYC2 2103 aa11.51□□□□□ -0.57
SNPH-203ENST00000614659 IL17DQ8TAD2 202 aa11.5□□□□□ -0.57
SNPH-203ENST00000614659 XCL2Q9UBD3 114 aa11.5□□□□□ -0.57
SNPH-203ENST00000614659 FOXI2Q6ZQN5 318 aa11.5□□□□□ -0.57
SNPH-203ENST00000614659 DYNAPQ8N1N2 210 aa11.5□□□□□ -0.57
SNPH-203ENST00000614659 IGKV1-17P01599 117 aa11.5□□□□□ -0.57
SNPH-203ENST00000614659 EGR2P11161 476 aaPredicted RBP11.5□□□□□ -0.57
SNPH-203ENST00000614659 IGLV1-47P01700 117 aa11.5□□□□□ -0.57
SNPH-203ENST00000614659 TRAV13-1A0A0B4J241 112 aa11.49□□□□□ -0.57
SNPH-203ENST00000614659 IGHV4-38-2P0DP08 117 aa11.49□□□□□ -0.57
SNPH-203ENST00000614659 FGF6P10767 208 aa11.49□□□□□ -0.57
SNPH-203ENST00000614659 INSL3P51460 131 aa11.49□□□□□ -0.57
SNPH-203ENST00000614659 PRO1854Q9UHT4 67 aa11.49□□□□□ -0.57
SNPH-203ENST00000614659 TEX22C9J3V5 150 aa11.49□□□□□ -0.57
SNPH-203ENST00000614659 C17orf77Q96MU5 243 aa11.49□□□□□ -0.57
SNPH-203ENST00000614659 AGPAT4-IT1Q9H0P7 198 aa11.49□□□□□ -0.57
SNPH-203ENST00000614659 IGHV7-81A0A0B4J1V7 117 aa11.49□□□□□ -0.57
SNPH-203ENST00000614659 HOXD3P31249 432 aaPredicted RBP11.49□□□□□ -0.57
SNPH-203ENST00000614659 FSTL3O95633 263 aa11.48□□□□□ -0.57
SNPH-203ENST00000614659 RNF152Q8N8N0 203 aa11.48□□□□□ -0.57
SNPH-203ENST00000614659 H3BMG7 143 aa11.48□□□□□ -0.57
SNPH-203ENST00000614659 IGHV3-53P01767 116 aa11.48□□□□□ -0.57
SNPH-203ENST00000614659 SPINK13Q1W4C9 94 aa11.48□□□□□ -0.57
SNPH-203ENST00000614659 MRPL35Q9NZE8 188 aaKnown RBP11.48□□□□□ -0.57
SNPH-203ENST00000614659 K7ERJ3 54 aa11.48□□□□□ -0.57
SNPH-203ENST00000614659 EIF4EBP1Q13541 118 aaPredicted RBP11.48□□□□□ -0.57
SNPH-203ENST00000614659 TRAV25A0A0B4J276 109 aa11.47□□□□□ -0.57
SNPH-203ENST00000614659 TRACP01848 142 aa11.47□□□□□ -0.57
SNPH-203ENST00000614659 CGB3P0DN86 165 aa11.47□□□□□ -0.57
SNPH-203ENST00000614659 CGB7P0DN87 165 aa11.47□□□□□ -0.57
SNPH-203ENST00000614659 KMT2EQ8IZD2 1858 aa11.47□□□□□ -0.57
SNPH-203ENST00000614659 SPANXCQ9NY87 97 aa11.47□□□□□ -0.57
SNPH-203ENST00000614659 MED14OSP0DP75 135 aa11.47□□□□□ -0.57
SNPH-203ENST00000614659 LINC01545Q5VT33 79 aa11.47□□□□□ -0.57
SNPH-203ENST00000614659 DEFB125Q8N687 156 aa11.47□□□□□ -0.57
SNPH-203ENST00000614659 CFHR4Q92496 578 aa11.47□□□□□ -0.57
SNPH-203ENST00000614659 HLA-DMBP28068 263 aa11.46□□□□□ -0.57
SNPH-203ENST00000614659 C12orf74Q32Q52 190 aa11.46□□□□□ -0.57
SNPH-203ENST00000614659 ZNF407Q9C0G0 2248 aa11.46□□□□□ -0.57
SNPH-203ENST00000614659 TRAV26-2A0A0B4J265 109 aa11.46□□□□□ -0.57
SNPH-203ENST00000614659 CCL25O15444 150 aa11.45□□□□□ -0.58
SNPH-203ENST00000614659 CTSGP08311 255 aa11.45□□□□□ -0.58
SNPH-203ENST00000614659 C16orf54Q6UWD8 224 aa11.45□□□□□ -0.58
SNPH-203ENST00000614659 Q6ZPA2 131 aa11.45□□□□□ -0.58
SNPH-203ENST00000614659 MORN5Q5VZ52 161 aa11.45□□□□□ -0.58
SNPH-203ENST00000614659 KLK9Q9UKQ9 250 aa11.45□□□□□ -0.58
SNPH-203ENST00000614659 ZFHX2Q9C0A1 2572 aaPredicted RBP11.45□□□□□ -0.58
SNPH-203ENST00000614659 TRBV25-1A0A075B6N4 114 aa11.45□□□□□ -0.58
SNPH-203ENST00000614659 GAGE12JA6NER3 117 aa11.45□□□□□ -0.58
SNPH-203ENST00000614659 GAGE7O76087 117 aa11.45□□□□□ -0.58
SNPH-203ENST00000614659 GAGE12FP0CL80 117 aa11.45□□□□□ -0.58
SNPH-203ENST00000614659 GAGE12GP0CL81 117 aa11.45□□□□□ -0.58
SNPH-203ENST00000614659 GAGE12IP0CL82 117 aa11.45□□□□□ -0.58
SNPH-203ENST00000614659 GAGE4Q13068 117 aa11.45□□□□□ -0.58
SNPH-203ENST00000614659 RITA1Q96K30 269 aa11.45□□□□□ -0.58
SNPH-203ENST00000614659 YLPM1P49750 1951 aaKnown RBP11.44□□□□□ -0.58
SNPH-203ENST00000614659 F8WEM9 126 aa11.44□□□□□ -0.58
SNPH-203ENST00000614659 CARD19Q96LW7 228 aa11.44□□□□□ -0.58
SNPH-203ENST00000614659 SH2D6Q7Z4S9 175 aa11.44□□□□□ -0.58
SNPH-203ENST00000614659 NRGNQ92686 78 aa11.44□□□□□ -0.58
SNPH-203ENST00000614659 ZNF318Q5VUA4 2279 aa11.43□□□□□ -0.58
SNPH-203ENST00000614659 TNFRSF13BO14836 293 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 168.3 ms