RNA–Protein interactions for RNA: ENST00000595792.1

PNKP-206, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 645 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-206ENST00000595792 NAGKQ9UJ70 344 aa12.25□□□□□ -0.45
PNKP-206ENST00000595792 TAAR5O14804 337 aa12.24□□□□□ -0.45
PNKP-206ENST00000595792 TCRAP04437 139 aa12.24□□□□□ -0.45
PNKP-206ENST00000595792 TYMSP04818 313 aa12.24□□□□□ -0.45
PNKP-206ENST00000595792 CRYBA4P53673 196 aa12.24□□□□□ -0.45
PNKP-206ENST00000595792 FAM159AQ6UWV7 190 aa12.24□□□□□ -0.45
PNKP-206ENST00000595792 C5orf17Q8NAS9 161 aa12.24□□□□□ -0.45
PNKP-206ENST00000595792 ZNF479Q96JC4 524 aa12.24□□□□□ -0.45
PNKP-206ENST00000595792 ACTR3CQ9C0K3 210 aaPredicted RBP12.24□□□□□ -0.45
PNKP-206ENST00000595792 IGHV3-16A0A0C4DH30 117 aa12.23□□□□□ -0.45
PNKP-206ENST00000595792 PAX4O43316 350 aa12.23□□□□□ -0.45
PNKP-206ENST00000595792 KRTAP10-2P60368 255 aa12.23□□□□□ -0.45
PNKP-206ENST00000595792 SUMO1P63165 101 aaKnown RBP12.23□□□□□ -0.45
PNKP-206ENST00000595792 RASL10AQ92737 203 aa12.23□□□□□ -0.45
PNKP-206ENST00000595792 TRGV11A0A075B6L2 103 aa12.22□□□□□ -0.45
PNKP-206ENST00000595792 TRAV21A0A0B4J279 112 aa12.22□□□□□ -0.45
PNKP-206ENST00000595792 CXorf1O96002 111 aa12.22□□□□□ -0.45
PNKP-206ENST00000595792 EPDR1Q9UM22 224 aa12.22□□□□□ -0.45
PNKP-206ENST00000595792 PSG8Q9UQ74 426 aa12.22□□□□□ -0.45
PNKP-206ENST00000595792 ARPC5O15511 151 aa12.21□□□□□ -0.45
PNKP-206ENST00000595792 LINC00315P59091 139 aa12.21□□□□□ -0.45
PNKP-206ENST00000595792 LINC00479Q96M42 142 aa12.21□□□□□ -0.45
PNKP-206ENST00000595792 SPXQ9BT56 116 aa12.21□□□□□ -0.45
PNKP-206ENST00000595792 TMEM167BQ9NRX6 74 aa12.21□□□□□ -0.45
PNKP-206ENST00000595792 PRO0255Q9UI72 69 aa12.21□□□□□ -0.45
PNKP-206ENST00000595792 HHLA3Q9XRX5 114 aa12.21□□□□□ -0.45
PNKP-206ENST00000595792 CTXND1A0A1B0GTU2 59 aa12.2□□□□□ -0.46
PNKP-206ENST00000595792 CDK2AP2O75956 126 aa12.2□□□□□ -0.46
PNKP-206ENST00000595792 FGF8P55075 233 aaPredicted RBP12.2□□□□□ -0.46
PNKP-206ENST00000595792 MAPKAPK5-AS1Q8N8E1 139 aa12.2□□□□□ -0.46
PNKP-206ENST00000595792 TMEM75Q8N9X5 138 aa12.2□□□□□ -0.46
PNKP-206ENST00000595792 ICOSQ9Y6W8 199 aa12.2□□□□□ -0.46
PNKP-206ENST00000595792 SERTM2A0A1B0GWG4 89 aa12.19□□□□□ -0.46
PNKP-206ENST00000595792 A0A1W2PPQ1 181 aa12.19□□□□□ -0.46
PNKP-206ENST00000595792 NXPH4O95158 308 aa12.19□□□□□ -0.46
PNKP-206ENST00000595792 FLI1Q01543 452 aaPredicted RBP12.19□□□□□ -0.46
PNKP-206ENST00000595792 IQCF2Q8IXL9 164 aa12.19□□□□□ -0.46
PNKP-206ENST00000595792 TRAV34A0A0B4J273 112 aa12.18□□□□□ -0.46
PNKP-206ENST00000595792 A0A1W2PRE2 83 aa12.18□□□□□ -0.46
PNKP-206ENST00000595792 FUSP35637 526 aaKnown RBP eCLIP12.18□□□□□ -0.46
PNKP-206ENST00000595792 UBE2G2P60604 165 aa12.18□□□□□ -0.46
PNKP-206ENST00000595792 PRNTQ86SH4 94 aa12.18□□□□□ -0.46
PNKP-206ENST00000595792 CYB561D1Q8N8Q1 229 aa12.18□□□□□ -0.46
PNKP-206ENST00000595792 OR11H4Q8NGC9 324 aa12.18□□□□□ -0.46
PNKP-206ENST00000595792 TRAV4A0A0B4J268 109 aa12.17□□□□□ -0.46
PNKP-206ENST00000595792 TRGV4A0A0C4DH28 118 aa12.17□□□□□ -0.46
PNKP-206ENST00000595792 M0R2P5 195 aa12.17□□□□□ -0.46
PNKP-206ENST00000595792 SIVA1O15304 175 aa12.17□□□□□ -0.46
PNKP-206ENST00000595792 GCGP01275 180 aa12.17□□□□□ -0.46
PNKP-206ENST00000595792 LYPD5Q6UWN5 251 aa12.17□□□□□ -0.46
PNKP-206ENST00000595792 DPPA3Q6W0C5 159 aa12.17□□□□□ -0.46
PNKP-206ENST00000595792 Q6ZRN7 208 aaPredicted RBP12.17□□□□□ -0.46
PNKP-206ENST00000595792 SDF2L1Q9HCN8 221 aa12.17□□□□□ -0.46
PNKP-206ENST00000595792 TNFRSF18Q9Y5U5 241 aa12.17□□□□□ -0.46
PNKP-206ENST00000595792 LOC100131303A0A0U1RQF7 123 aa12.16□□□□□ -0.46
PNKP-206ENST00000595792 FAM74A7A6NL05 159 aa12.16□□□□□ -0.46
PNKP-206ENST00000595792 K7EQD1 137 aa12.16□□□□□ -0.46
PNKP-206ENST00000595792 SLAQ13239 276 aa12.16□□□□□ -0.46
PNKP-206ENST00000595792 NDFIP1Q9BT67 221 aa12.16□□□□□ -0.46
PNKP-206ENST00000595792 HMSDA8MTL9 139 aa12.15□□□□□ -0.46
PNKP-206ENST00000595792 FHITP49789 147 aa12.15□□□□□ -0.46
PNKP-206ENST00000595792 ZNF345Q14585 488 aa12.15□□□□□ -0.46
PNKP-206ENST00000595792 MRPL23Q16540 153 aaKnown RBP12.15□□□□□ -0.46
PNKP-206ENST00000595792 AKR1C8PQ5T2L2 129 aa12.15□□□□□ -0.46
PNKP-206ENST00000595792 KCNS1Q96KK3 526 aa12.15□□□□□ -0.46
PNKP-206ENST00000595792 C9orf85Q96MD7 179 aa12.15□□□□□ -0.46
PNKP-206ENST00000595792 K7EQM0 130 aa12.14□□□□□ -0.47
PNKP-206ENST00000595792 PFN1P07737 140 aaKnown RBP12.14□□□□□ -0.47
PNKP-206ENST00000595792 RNASE3P12724 160 aaKnown RBP12.14□□□□□ -0.47
PNKP-206ENST00000595792 GYPEP15421 78 aa12.14□□□□□ -0.47
PNKP-206ENST00000595792 BTF3P20290 206 aaKnown RBP12.14□□□□□ -0.47
PNKP-206ENST00000595792 SMUG1Q53HV7 270 aa12.14□□□□□ -0.47
PNKP-206ENST00000595792 KCNRGQ8N5I3 272 aa12.14□□□□□ -0.47
PNKP-206ENST00000595792 OR4C5Q8NGB2 326 aa12.14□□□□□ -0.47
PNKP-206ENST00000595792 ARL2-SNX15V9GYD0 113 aa12.14□□□□□ -0.47
PNKP-206ENST00000595792 IGKV3D-20A0A0C4DH25 116 aa12.13□□□□□ -0.47
PNKP-206ENST00000595792 A0A0D9SG52 128 aa12.13□□□□□ -0.47
PNKP-206ENST00000595792 MAP1LC3B2A6NCE7 125 aa12.13□□□□□ -0.47
PNKP-206ENST00000595792 FBLL1A6NHQ2 334 aaKnown RBP12.13□□□□□ -0.47
PNKP-206ENST00000595792 PEX7O00628 323 aa12.13□□□□□ -0.47
PNKP-206ENST00000595792 EIF5AP63241 154 aaKnown RBP12.13□□□□□ -0.47
PNKP-206ENST00000595792 NEGR1Q7Z3B1 354 aa12.13□□□□□ -0.47
PNKP-206ENST00000595792 MAP1LC3BQ9GZQ8 125 aa12.13□□□□□ -0.47
PNKP-206ENST00000595792 PGPEP1LA6NFU8 196 aa12.12□□□□□ -0.47
PNKP-206ENST00000595792 C9JCJ5 164 aa12.12□□□□□ -0.47
PNKP-206ENST00000595792 GATA1P15976 413 aaPredicted RBP12.12□□□□□ -0.47
PNKP-206ENST00000595792 CRIP1P50238 77 aa12.12□□□□□ -0.47
PNKP-206ENST00000595792 Q86TA4 180 aa12.12□□□□□ -0.47
PNKP-206ENST00000595792 WFDC10BQ8IUB3 73 aa12.12□□□□□ -0.47
PNKP-206ENST00000595792 NKX6-2Q9C056 277 aaPredicted RBP12.12□□□□□ -0.47
PNKP-206ENST00000595792 RS1O15537 224 aa12.11□□□□□ -0.47
PNKP-206ENST00000595792 IFNA7P01567 189 aa12.11□□□□□ -0.47
PNKP-206ENST00000595792 ZNF876PQ49A33 203 aa12.11□□□□□ -0.47
PNKP-206ENST00000595792 SAPCD1Q5SSQ6 148 aa12.11□□□□□ -0.47
PNKP-206ENST00000595792 CFAP126Q5VTH2 177 aa12.11□□□□□ -0.47
PNKP-206ENST00000595792 KANTRA0A1W2PQU2 76 aa12.1□□□□□ -0.47
PNKP-206ENST00000595792 DNAH10OSP0CZ25 163 aa12.1□□□□□ -0.47
PNKP-206ENST00000595792 SRIP30626 198 aa12.1□□□□□ -0.47
PNKP-206ENST00000595792 ZNF506Q5JVG8 444 aa12.1□□□□□ -0.47
PNKP-206ENST00000595792 ZFP69Q49AA0 526 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms