RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 NEGR1Q7Z3B1 354 aa14.22□□□□□ -0.13
DDX39A-206ENST00000587730 IGKV2D-26A0A0A0MRZ7 120 aa14.22□□□□□ -0.13
DDX39A-206ENST00000587730 TRAV21A0A0B4J279 112 aa14.22□□□□□ -0.13
DDX39A-206ENST00000587730 LINC01549A6NIU2 74 aa14.22□□□□□ -0.13
DDX39A-206ENST00000587730 GAS8-AS1O95177 125 aa14.22□□□□□ -0.13
DDX39A-206ENST00000587730 CDSNQ15517 529 aa14.22□□□□□ -0.13
DDX39A-206ENST00000587730 CEND1Q8N111 149 aa14.22□□□□□ -0.13
DDX39A-206ENST00000587730 GLMPQ8WWB7 406 aa14.22□□□□□ -0.13
DDX39A-206ENST00000587730 ITLN2Q8WWU7 325 aaPredicted RBP14.22□□□□□ -0.13
DDX39A-206ENST00000587730 SMIM2Q9BVW6 85 aa14.22□□□□□ -0.13
DDX39A-206ENST00000587730 RELNP78509 3460 aa14.21□□□□□ -0.13
DDX39A-206ENST00000587730 CFAP46Q8IYW2 2715 aa14.21□□□□□ -0.13
DDX39A-206ENST00000587730 TRAV41A0A0B4J266 112 aa14.21□□□□□ -0.13
DDX39A-206ENST00000587730 H7C1H1 209 aa14.21□□□□□ -0.13
DDX39A-206ENST00000587730 M0R381 172 aa14.21□□□□□ -0.13
DDX39A-206ENST00000587730 PRB1P04280 392 aa14.21□□□□□ -0.13
DDX39A-206ENST00000587730 GATA1P15976 413 aaPredicted RBP14.21□□□□□ -0.13
DDX39A-206ENST00000587730 OR10J6PQ8NGY7 276 aa14.21□□□□□ -0.13
DDX39A-206ENST00000587730 RAB37Q96AX2 223 aa14.21□□□□□ -0.13
DDX39A-206ENST00000587730 IGHV3-66A0A0C4DH42 116 aa14.2□□□□□ -0.14
DDX39A-206ENST00000587730 G3V318 75 aa14.2□□□□□ -0.14
DDX39A-206ENST00000587730 G3V4G9 280 aa14.2□□□□□ -0.14
DDX39A-206ENST00000587730 H3BUA1 57 aa14.2□□□□□ -0.14
DDX39A-206ENST00000587730 MEGF9Q9H1U4 602 aa14.2□□□□□ -0.14
DDX39A-206ENST00000587730 TMEM160Q9NX00 188 aa14.2□□□□□ -0.14
DDX39A-206ENST00000587730 MRPL35Q9NZE8 188 aaKnown RBP14.2□□□□□ -0.14
DDX39A-206ENST00000587730 COL6A6A6NMZ7 2263 aa14.2□□□□□ -0.14
DDX39A-206ENST00000587730 HELZ2Q9BYK8 2649 aaKnown RBP14.2□□□□□ -0.14
DDX39A-206ENST00000587730 NDUFA4O00483 81 aa14.2□□□□□ -0.14
DDX39A-206ENST00000587730 TCTAP57738 103 aa14.2□□□□□ -0.14
DDX39A-206ENST00000587730 C19orf54Q5BKX5 351 aa14.2□□□□□ -0.14
DDX39A-206ENST00000587730 GTSCR1Q86UQ5 136 aa14.2□□□□□ -0.14
DDX39A-206ENST00000587730 CSTL1Q9H114 145 aa14.2□□□□□ -0.14
DDX39A-206ENST00000587730 TRAV40A0A0B4J280 105 aa14.19□□□□□ -0.14
DDX39A-206ENST00000587730 F8VRH5 84 aa14.19□□□□□ -0.14
DDX39A-206ENST00000587730 LMO4P61968 165 aa14.19□□□□□ -0.14
DDX39A-206ENST00000587730 ADGRG4Q8IZF6 3080 aa14.18□□□□□ -0.14
DDX39A-206ENST00000587730 ASIPP42127 132 aa14.18□□□□□ -0.14
DDX39A-206ENST00000587730 FXYD2P54710 66 aa14.18□□□□□ -0.14
DDX39A-206ENST00000587730 USMG5Q96IX5 58 aa14.18□□□□□ -0.14
DDX39A-206ENST00000587730 DPH3P1Q9H4G8 78 aa14.18□□□□□ -0.14
DDX39A-206ENST00000587730 H3BVH4 76 aa14.18□□□□□ -0.14
DDX39A-206ENST00000587730 ARL3P36405 182 aa14.18□□□□□ -0.14
DDX39A-206ENST00000587730 TOMM6Q96B49 74 aa14.18□□□□□ -0.14
DDX39A-206ENST00000587730 NBASA2RRP1 2371 aa14.17□□□□□ -0.14
DDX39A-206ENST00000587730 SUMO2P61956 95 aaKnown RBP14.17□□□□□ -0.14
DDX39A-206ENST00000587730 SAMD13Q5VXD3 122 aa14.17□□□□□ -0.14
DDX39A-206ENST00000587730 ZNF207O43670 478 aaKnown RBP14.16□□□□□ -0.14
DDX39A-206ENST00000587730 PHLDA1Q8WV24 401 aaPredicted RBP14.16□□□□□ -0.14
DDX39A-206ENST00000587730 IGHV3OR16-13A0A075B7E8 117 aa14.15□□□□□ -0.14
DDX39A-206ENST00000587730 IGHV3-74A0A0B4J1X5 117 aa14.15□□□□□ -0.14
DDX39A-206ENST00000587730 S100A4P26447 101 aaKnown RBP14.15□□□□□ -0.14
DDX39A-206ENST00000587730 UBTD1Q9HAC8 227 aa14.15□□□□□ -0.14
DDX39A-206ENST00000587730 OR11H12B2RN74 326 aa14.15□□□□□ -0.14
DDX39A-206ENST00000587730 IGF1P05019 195 aa14.15□□□□□ -0.14
DDX39A-206ENST00000587730 APRG1Q8IVJ8 170 aa14.15□□□□□ -0.14
DDX39A-206ENST00000587730 ZFAND2AQ8N6M9 145 aa14.15□□□□□ -0.14
DDX39A-206ENST00000587730 OR11H1Q8NG94 326 aa14.15□□□□□ -0.14
DDX39A-206ENST00000587730 OR11H2Q8NH07 326 aa14.15□□□□□ -0.14
DDX39A-206ENST00000587730 SCGB3A1Q96QR1 104 aa14.15□□□□□ -0.14
DDX39A-206ENST00000587730 TRAV26-2A0A0B4J265 109 aa14.14□□□□□ -0.15
DDX39A-206ENST00000587730 E9PLD3 99 aa14.14□□□□□ -0.15
DDX39A-206ENST00000587730 RPL32P62910 135 aaKnown RBP14.14□□□□□ -0.15
DDX39A-206ENST00000587730 PHLDA3Q9Y5J5 127 aa14.14□□□□□ -0.15
DDX39A-206ENST00000587730 ZNF462Q96JM2 2506 aa14.14□□□□□ -0.15
DDX39A-206ENST00000587730 IGHV3-49A0A0A0MS15 119 aa14.13□□□□□ -0.15
DDX39A-206ENST00000587730 LINC01548A6NM66 108 aa14.13□□□□□ -0.15
DDX39A-206ENST00000587730 SAP30O75446 220 aa14.13□□□□□ -0.15
DDX39A-206ENST00000587730 TM4SF20Q53R12 229 aa14.13□□□□□ -0.15
DDX39A-206ENST00000587730 BPESC1Q9GZL8 116 aa14.13□□□□□ -0.15
DDX39A-206ENST00000587730 NHP2Q9NX24 153 aaKnown RBP14.13□□□□□ -0.15
DDX39A-206ENST00000587730 CHTOPQ9Y3Y2 248 aaKnown RBP14.13□□□□□ -0.15
DDX39A-206ENST00000587730 F8W1H4 67 aa14.13□□□□□ -0.15
DDX39A-206ENST00000587730 SOCS3O14543 225 aa14.13□□□□□ -0.15
DDX39A-206ENST00000587730 FAM19A4Q96LR4 140 aa14.13□□□□□ -0.15
DDX39A-206ENST00000587730 NAA38Q9BRA0 125 aaKnown RBP14.13□□□□□ -0.15
DDX39A-206ENST00000587730 ARHGAP32A7KAX9 2087 aa14.12□□□□□ -0.15
DDX39A-206ENST00000587730 IGHV1-69DA0A0B4J2H0 117 aa14.12□□□□□ -0.15
DDX39A-206ENST00000587730 IGHV1-69P01742 117 aa14.12□□□□□ -0.15
DDX39A-206ENST00000587730 ZNF843Q8N446 348 aa14.12□□□□□ -0.15
DDX39A-206ENST00000587730 NEXN-AS1Q8NBZ9 246 aa14.12□□□□□ -0.15
DDX39A-206ENST00000587730 HIST1H4GQ99525 98 aa14.12□□□□□ -0.15
DDX39A-206ENST00000587730 FLNBO75369 2602 aaKnown RBP14.12□□□□□ -0.15
DDX39A-206ENST00000587730 MYMXA0A1B0GTQ4 84 aa14.11□□□□□ -0.15
DDX39A-206ENST00000587730 J3QR89 54 aa14.11□□□□□ -0.15
DDX39A-206ENST00000587730 PAPPA-AS1Q5QFB9 102 aa14.11□□□□□ -0.15
DDX39A-206ENST00000587730 POM121L12Q8N7R1 296 aa14.11□□□□□ -0.15
DDX39A-206ENST00000587730 C20orf173Q96LM9 149 aa14.11□□□□□ -0.15
DDX39A-206ENST00000587730 A0A1B0GWB2 263 aa14.11□□□□□ -0.15
DDX39A-206ENST00000587730 NXPH4O95158 308 aa14.11□□□□□ -0.15
DDX39A-206ENST00000587730 PRR9Q5T870 116 aa14.11□□□□□ -0.15
DDX39A-206ENST00000587730 RASL10AQ92737 203 aa14.11□□□□□ -0.15
DDX39A-206ENST00000587730 A0A1W2PPR1 153 aa14.1□□□□□ -0.15
DDX39A-206ENST00000587730 IGLL5B9A064 214 aa14.1□□□□□ -0.15
DDX39A-206ENST00000587730 C12orf74Q32Q52 190 aa14.1□□□□□ -0.15
DDX39A-206ENST00000587730 FOXI2Q6ZQN5 318 aa14.1□□□□□ -0.15
DDX39A-206ENST00000587730 ZNF479Q96JC4 524 aa14.1□□□□□ -0.15
DDX39A-206ENST00000587730 TTTY13Q9BZ97 58 aa14.1□□□□□ -0.15
DDX39A-206ENST00000587730 MAPKAPK5-AS1Q8N8E1 139 aa14.08□□□□□ -0.15
DDX39A-206ENST00000587730 SETXQ7Z333 2677 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms