RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 RHOBP62745 196 aa3.23□□□□□ -1.89
SMG1-206ENST00000562668 ZNF415Q09FC8 603 aa3.23□□□□□ -1.89
SMG1-206ENST00000562668 PDE6HQ13956 83 aa3.23□□□□□ -1.89
SMG1-206ENST00000562668 PSG3Q16557 428 aa3.23□□□□□ -1.89
SMG1-206ENST00000562668 GUK1Q16774 197 aa3.23□□□□□ -1.89
SMG1-206ENST00000562668 ACOT6Q3I5F7 207 aaPredicted RBP3.23□□□□□ -1.89
SMG1-206ENST00000562668 TMEM41BQ5BJD5 291 aa3.23□□□□□ -1.89
SMG1-206ENST00000562668 ACTL10Q5JWF8 245 aa3.23□□□□□ -1.89
SMG1-206ENST00000562668 SAMD13Q5VXD3 122 aa3.23□□□□□ -1.89
SMG1-206ENST00000562668 FOXI2Q6ZQN5 318 aa3.23□□□□□ -1.89
SMG1-206ENST00000562668 BAP18Q8IXM2 172 aa3.23□□□□□ -1.89
SMG1-206ENST00000562668 EXOC3-AS1Q8N2X6 119 aa3.23□□□□□ -1.89
SMG1-206ENST00000562668 MRPL53Q96EL3 112 aaKnown RBP3.23□□□□□ -1.89
SMG1-206ENST00000562668 FAM19A4Q96LR4 140 aa3.23□□□□□ -1.89
SMG1-206ENST00000562668 OVOL2Q9BRP0 275 aa3.23□□□□□ -1.89
SMG1-206ENST00000562668 SLC50A1Q9BRV3 221 aa3.23□□□□□ -1.89
SMG1-206ENST00000562668 PAXXQ9BUH6 204 aa3.23□□□□□ -1.89
SMG1-206ENST00000562668 EDA2RQ9HAV5 297 aa3.23□□□□□ -1.89
SMG1-206ENST00000562668 RETNQ9HD89 108 aa3.23□□□□□ -1.89
SMG1-206ENST00000562668 RNF24Q9Y225 148 aa3.23□□□□□ -1.89
SMG1-206ENST00000562668 ALMS1Q8TCU4 4167 aa3.22□□□□□ -1.89
SMG1-206ENST00000562668 LYSTQ99698 3801 aa3.22□□□□□ -1.89
SMG1-206ENST00000562668 CTXND1A0A1B0GTU2 59 aa3.22□□□□□ -1.89
SMG1-206ENST00000562668 A0A1W2PPQ1 181 aa3.22□□□□□ -1.89
SMG1-206ENST00000562668 KANTRA0A1W2PQU2 76 aa3.22□□□□□ -1.89
SMG1-206ENST00000562668 ZNF705EA8MWA4 302 aaPredicted RBP3.22□□□□□ -1.89
SMG1-206ENST00000562668 UBE2CO00762 179 aa3.22□□□□□ -1.89
SMG1-206ENST00000562668 MBP02144 154 aa3.22□□□□□ -1.89
SMG1-206ENST00000562668 ZNF705DP0CH99 300 aaPredicted RBP3.22□□□□□ -1.89
SMG1-206ENST00000562668 ZNF705BP0CI00 300 aaPredicted RBP3.22□□□□□ -1.89
SMG1-206ENST00000562668 RBMY1A1P0DJD3 496 aaKnown RBP3.22□□□□□ -1.89
SMG1-206ENST00000562668 RBMY1CP0DJD4 496 aa3.22□□□□□ -1.89
SMG1-206ENST00000562668 ARL14EPLP0DKL9 152 aa3.22□□□□□ -1.89
SMG1-206ENST00000562668 RPL35AP18077 110 aaKnown RBP3.22□□□□□ -1.89
SMG1-206ENST00000562668 GCHFRP30047 84 aa3.22□□□□□ -1.89
SMG1-206ENST00000562668 ID1P41134 155 aa3.22□□□□□ -1.89
SMG1-206ENST00000562668 CDC34P49427 236 aaPredicted RBP3.22□□□□□ -1.89
SMG1-206ENST00000562668 CNN1P51911 297 aaKnown RBP3.22□□□□□ -1.89
SMG1-206ENST00000562668 RBMY1FQ15415 496 aaKnown RBP3.22□□□□□ -1.89
SMG1-206ENST00000562668 KHDC3LQ587J8 217 aa3.22□□□□□ -1.89
SMG1-206ENST00000562668 S100A7AQ86SG5 101 aa3.22□□□□□ -1.89
SMG1-206ENST00000562668 SLC51BQ86UW2 128 aa3.22□□□□□ -1.89
SMG1-206ENST00000562668 OR8A1Q8NGG7 326 aa3.22□□□□□ -1.89
SMG1-206ENST00000562668 BLNKQ8WV28 456 aa3.22□□□□□ -1.89
SMG1-206ENST00000562668 MBD3L1Q8WWY6 194 aa3.22□□□□□ -1.89
SMG1-206ENST00000562668 RPUSD4Q96CM3 377 aaKnown RBP3.22□□□□□ -1.89
SMG1-206ENST00000562668 LINC00052Q96N35 136 aa3.22□□□□□ -1.89
SMG1-206ENST00000562668 ZNF471Q9BX82 626 aaPredicted RBP3.22□□□□□ -1.89
SMG1-206ENST00000562668 SLC35B3Q9H1N7 401 aa3.22□□□□□ -1.89
SMG1-206ENST00000562668 TUBA4BQ9H853 241 aa3.22□□□□□ -1.89
SMG1-206ENST00000562668 TP53TG1Q9Y2A0 90 aa3.22□□□□□ -1.89
SMG1-206ENST00000562668 STAB2Q8WWQ8 2551 aa3.22□□□□□ -1.89
SMG1-206ENST00000562668 NBEAL2Q6ZNJ1 2754 aa3.22□□□□□ -1.89
SMG1-206ENST00000562668 GGTLC3B5MD39 225 aa3.21□□□□□ -1.9
SMG1-206ENST00000562668 BOLA2-SMG1P6H3BVE0 249 aa3.21□□□□□ -1.9
SMG1-206ENST00000562668 OR7C2O60412 319 aa3.21□□□□□ -1.9
SMG1-206ENST00000562668 CT45A10P0DMU9 189 aa3.21□□□□□ -1.9
SMG1-206ENST00000562668 TPT1P13693 172 aaKnown RBP3.21□□□□□ -1.9
SMG1-206ENST00000562668 SULT1A2P50226 295 aa3.21□□□□□ -1.9
SMG1-206ENST00000562668 APOC4P55056 127 aa3.21□□□□□ -1.9
SMG1-206ENST00000562668 FGF8P55075 233 aaPredicted RBP3.21□□□□□ -1.9
SMG1-206ENST00000562668 TAS2R45P59539 299 aa3.21□□□□□ -1.9
SMG1-206ENST00000562668 RANP62826 216 aaKnown RBP3.21□□□□□ -1.9
SMG1-206ENST00000562668 UBE2L3P68036 154 aaKnown RBP3.21□□□□□ -1.9
SMG1-206ENST00000562668 CCL20P78556 96 aa3.21□□□□□ -1.9
SMG1-206ENST00000562668 PSG9Q00887 426 aa3.21□□□□□ -1.9
SMG1-206ENST00000562668 DEFB135Q30KP9 77 aa3.21□□□□□ -1.9
SMG1-206ENST00000562668 MORN3Q6PF18 240 aaPredicted RBP3.21□□□□□ -1.9
SMG1-206ENST00000562668 ZNF705AQ6ZN79 300 aaPredicted RBP3.21□□□□□ -1.9
SMG1-206ENST00000562668 STHQ8IWL8 128 aa3.21□□□□□ -1.9
SMG1-206ENST00000562668 C1orf158Q8N1D5 194 aa3.21□□□□□ -1.9
SMG1-206ENST00000562668 LYPD1Q8N2G4 141 aa3.21□□□□□ -1.9
SMG1-206ENST00000562668 ARL6IP6Q8N6S5 226 aa3.21□□□□□ -1.9
SMG1-206ENST00000562668 RCHY1Q96PM5 261 aa3.21□□□□□ -1.9
SMG1-206ENST00000562668 ACTR3CQ9C0K3 210 aaPredicted RBP3.21□□□□□ -1.9
SMG1-206ENST00000562668 AGPAT4-IT1Q9H0P7 198 aa3.21□□□□□ -1.9
SMG1-206ENST00000562668 Q9H3A6 140 aa3.21□□□□□ -1.9
SMG1-206ENST00000562668 CLEC5AQ9NY25 188 aa3.21□□□□□ -1.9
SMG1-206ENST00000562668 PRELID1Q9Y255 219 aa3.21□□□□□ -1.9
SMG1-206ENST00000562668 YTHDF2Q9Y5A9 579 aaKnown RBP3.21□□□□□ -1.9
SMG1-206ENST00000562668 DNAH2Q9P225 4427 aa3.21□□□□□ -1.9
SMG1-206ENST00000562668 DNAH6Q9C0G6 4158 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 IGKV2-40A0A087WW87 121 aaPredicted RBP3.2□□□□□ -1.9
SMG1-206ENST00000562668 TRAV1-1A0A0B4J248 108 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 A0A1W2PPV4 95 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 A0A1W2PRE2 83 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 PLAC8L1A1L4L8 177 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 MAP1LC3B2A6NCE7 125 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 FAM74A7A6NL05 159 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 UMAD1C9J7I0 102 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 M0R2Z0 102 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 PFDN1O60925 122 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 DUSP14O95147 198 aaKnown RBP3.2□□□□□ -1.9
SMG1-206ENST00000562668 CXorf1O96002 111 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 CA1P00915 261 aaPredicted RBP3.2□□□□□ -1.9
SMG1-206ENST00000562668 IGKV2D-40P01614 121 aaPredicted RBP3.2□□□□□ -1.9
SMG1-206ENST00000562668 SLC25A5P05141 298 aaKnown RBP3.2□□□□□ -1.9
SMG1-206ENST00000562668 CRISP2P16562 243 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 XGP55808 180 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 FXYD7P58549 80 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms