RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 M0R129 80 aa1.6□□□□□ -2.15
SPG11-218ENST00000559754 IGHV3-33P01772 117 aa1.6□□□□□ -2.15
SPG11-218ENST00000559754 FAM74A1Q5RGS3 127 aa1.6□□□□□ -2.15
SPG11-218ENST00000559754 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.6□□□□□ -2.15
SPG11-218ENST00000559754 KCNRGQ8N5I3 272 aa1.6□□□□□ -2.15
SPG11-218ENST00000559754 TCTEX1D1Q8N7M0 179 aa1.6□□□□□ -2.15
SPG11-218ENST00000559754 TCEAL7Q9BRU2 100 aa1.6□□□□□ -2.15
SPG11-218ENST00000559754 SNRNP25Q9BV90 132 aaKnown RBP1.6□□□□□ -2.15
SPG11-218ENST00000559754 NOP16Q9Y3C1 178 aaKnown RBP1.6□□□□□ -2.15
SPG11-218ENST00000559754 CR1P17927 2039 aa1.6□□□□□ -2.15
SPG11-218ENST00000559754 CECR2Q9BXF3 1484 aa1.6□□□□□ -2.15
SPG11-218ENST00000559754 NINQ8N4C6 2090 aa1.6□□□□□ -2.15
SPG11-218ENST00000559754 MRC2Q9UBG0 1479 aa1.59□□□□□ -2.15
SPG11-218ENST00000559754 TRAV2A0A0B4J234 112 aa1.59□□□□□ -2.15
SPG11-218ENST00000559754 F6UZH7 168 aa1.59□□□□□ -2.15
SPG11-218ENST00000559754 F8W1H4 67 aa1.59□□□□□ -2.15
SPG11-218ENST00000559754 J3QLW9 94 aa1.59□□□□□ -2.15
SPG11-218ENST00000559754 CORTO00230 105 aa1.59□□□□□ -2.15
SPG11-218ENST00000559754 ADCYAP1P18509 176 aa1.59□□□□□ -2.15
SPG11-218ENST00000559754 SNX29P2Q8IUI4 249 aa1.59□□□□□ -2.15
SPG11-218ENST00000559754 COPS9Q8WXC6 57 aa1.59□□□□□ -2.15
SPG11-218ENST00000559754 PSMG3Q9BT73 122 aaPredicted RBP1.59□□□□□ -2.15
SPG11-218ENST00000559754 REG4Q9BYZ8 158 aa1.59□□□□□ -2.15
SPG11-218ENST00000559754 TAS2R8Q9NYW2 309 aa1.59□□□□□ -2.15
SPG11-218ENST00000559754 KLK9Q9UKQ9 250 aa1.59□□□□□ -2.15
SPG11-218ENST00000559754 FBN1P35555 2871 aaKnown RBP1.59□□□□□ -2.16
SPG11-218ENST00000559754 CASZ1Q86V15 1759 aa1.59□□□□□ -2.16
SPG11-218ENST00000559754 TNRC6BQ9UPQ9 1833 aaKnown RBP1.59□□□□□ -2.16
SPG11-218ENST00000559754 QRICH2Q9H0J4 1663 aa1.58□□□□□ -2.16
SPG11-218ENST00000559754 BCORL1Q5H9F3 1711 aa1.58□□□□□ -2.16
SPG11-218ENST00000559754 EXPH5Q8NEV8 1989 aa1.58□□□□□ -2.16
SPG11-218ENST00000559754 CHD3Q12873 2000 aaKnown RBP1.58□□□□□ -2.16
SPG11-218ENST00000559754 LOC100130705A0A1B0GUX0 176 aa1.58□□□□□ -2.16
SPG11-218ENST00000559754 TRBV6-4A0A1B0GX49 114 aa1.58□□□□□ -2.16
SPG11-218ENST00000559754 ATP6V1G2-DDX39BF2Z307 99 aa1.58□□□□□ -2.16
SPG11-218ENST00000559754 MRPS14O60783 128 aaKnown RBP1.58□□□□□ -2.16
SPG11-218ENST00000559754 PITX3O75364 302 aa1.58□□□□□ -2.16
SPG11-218ENST00000559754 MEIG1Q5JSS6 88 aa1.58□□□□□ -2.16
SPG11-218ENST00000559754 IDO2Q6ZQW0 420 aa1.58□□□□□ -2.16
SPG11-218ENST00000559754 SLC25A26Q70HW3 274 aa1.58□□□□□ -2.16
SPG11-218ENST00000559754 C5orf17Q8NAS9 161 aa1.58□□□□□ -2.16
SPG11-218ENST00000559754 VSTM2AQ8TAG5 236 aa1.58□□□□□ -2.16
SPG11-218ENST00000559754 PP6455Q8WZ26 134 aa1.58□□□□□ -2.16
SPG11-218ENST00000559754 C12orf57Q99622 126 aa1.58□□□□□ -2.16
SPG11-218ENST00000559754 PDCD10Q9BUL8 212 aa1.58□□□□□ -2.16
SPG11-218ENST00000559754 RERGLQ9H628 205 aa1.58□□□□□ -2.16
SPG11-218ENST00000559754 MED9Q9NWA0 146 aa1.58□□□□□ -2.16
SPG11-218ENST00000559754 MYOFQ9NZM1 2061 aa1.58□□□□□ -2.16
SPG11-218ENST00000559754 CFTRP13569 1480 aa1.57□□□□□ -2.16
SPG11-218ENST00000559754 DOCK10Q96BY6 2186 aa1.57□□□□□ -2.16
SPG11-218ENST00000559754 SMARCA2P51531 1590 aa1.57□□□□□ -2.16
SPG11-218ENST00000559754 TRGV2A0A075B6R0 118 aa1.57□□□□□ -2.16
SPG11-218ENST00000559754 H3BRM9 83 aa1.57□□□□□ -2.16
SPG11-218ENST00000559754 NUPR1O60356 82 aa1.57□□□□□ -2.16
SPG11-218ENST00000559754 AKAIN1P0CW23 69 aa1.57□□□□□ -2.16
SPG11-218ENST00000559754 DEFB103AP81534 67 aa1.57□□□□□ -2.16
SPG11-218ENST00000559754 MIC13Q5XKP0 118 aa1.57□□□□□ -2.16
SPG11-218ENST00000559754 ZCCHC13Q8WW36 166 aaKnown RBP1.57□□□□□ -2.16
SPG11-218ENST00000559754 SCN3BQ9NY72 215 aa1.57□□□□□ -2.16
SPG11-218ENST00000559754 CRCT1Q9UGL9 99 aa1.57□□□□□ -2.16
SPG11-218ENST00000559754 ZFP30Q9Y2G7 519 aa1.57□□□□□ -2.16
SPG11-218ENST00000559754 LRP5O75197 1615 aa1.57□□□□□ -2.16
SPG11-218ENST00000559754 MCM3APO60318 1980 aa1.57□□□□□ -2.16
SPG11-218ENST00000559754 TNRC6AQ8NDV7 1962 aaKnown RBP1.57□□□□□ -2.16
SPG11-218ENST00000559754 A2ML1A8K2U0 1454 aa1.56□□□□□ -2.16
SPG11-218ENST00000559754 MYOM2P54296 1465 aa1.56□□□□□ -2.16
SPG11-218ENST00000559754 ADGRB2O60241 1585 aa1.56□□□□□ -2.16
SPG11-218ENST00000559754 VWDEQ8N2E2 1590 aa1.56□□□□□ -2.16
SPG11-218ENST00000559754 MYO18AQ92614 2054 aaKnown RBP1.56□□□□□ -2.16
SPG11-218ENST00000559754 A0A1W2PRS3 328 aa1.56□□□□□ -2.16
SPG11-218ENST00000559754 GEMIN2O14893 280 aaKnown RBP1.56□□□□□ -2.16
SPG11-218ENST00000559754 MPV17LQ2QL34 196 aa1.56□□□□□ -2.16
SPG11-218ENST00000559754 KRTAP13-4Q3LI77 160 aa1.56□□□□□ -2.16
SPG11-218ENST00000559754 LINC00299Q6ZSB3 139 aa1.56□□□□□ -2.16
SPG11-218ENST00000559754 DYNLRB2Q8TF09 96 aa1.56□□□□□ -2.16
SPG11-218ENST00000559754 NAA60Q9H7X0 242 aa1.56□□□□□ -2.16
SPG11-218ENST00000559754 CDC42SE1Q9NRR8 79 aa1.56□□□□□ -2.16
SPG11-218ENST00000559754 BOKQ9UMX3 212 aaPredicted RBP1.56□□□□□ -2.16
SPG11-218ENST00000559754 LAMB1P07942 1786 aa1.56□□□□□ -2.16
SPG11-218ENST00000559754 CACNA1GO43497 2377 aa1.55□□□□□ -2.16
SPG11-218ENST00000559754 M0R2N4 97 aa1.55□□□□□ -2.16
SPG11-218ENST00000559754 INE1O15225 51 aa1.55□□□□□ -2.16
SPG11-218ENST00000559754 SMIM6P0DI80 62 aa1.55□□□□□ -2.16
SPG11-218ENST00000559754 GNG4P50150 75 aa1.55□□□□□ -2.16
SPG11-218ENST00000559754 C3orf62Q6ZUJ4 267 aa1.55□□□□□ -2.16
SPG11-218ENST00000559754 PPDPFLQ8WWR9 84 aa1.55□□□□□ -2.16
SPG11-218ENST00000559754 C14orf144Q96I85 54 aa1.55□□□□□ -2.16
SPG11-218ENST00000559754 AGPAT4-IT1Q9H0P7 198 aa1.55□□□□□ -2.16
SPG11-218ENST00000559754 ARFGEF3Q5TH69 2177 aa1.54□□□□□ -2.16
SPG11-218ENST00000559754 A0A0J9YY99 117 aa1.54□□□□□ -2.16
SPG11-218ENST00000559754 SPAARA0A1B0GVQ0 90 aa1.54□□□□□ -2.16
SPG11-218ENST00000559754 C20orf202A1L168 122 aa1.54□□□□□ -2.16
SPG11-218ENST00000559754 CCDC179H3BU77 68 aa1.54□□□□□ -2.16
SPG11-218ENST00000559754 HIST1H1DP16402 221 aaKnown RBP1.54□□□□□ -2.16
SPG11-218ENST00000559754 RHOHQ15669 191 aa1.54□□□□□ -2.16
SPG11-218ENST00000559754 OR2T2Q6IF00 324 aa1.54□□□□□ -2.16
SPG11-218ENST00000559754 SPANXDQ9BXN6 97 aa1.54□□□□□ -2.16
SPG11-218ENST00000559754 CITO14578 2027 aa1.54□□□□□ -2.16
SPG11-218ENST00000559754 LOC110117498A0A087WWA1 95 aa1.53□□□□□ -2.16
SPG11-218ENST00000559754 CACNA1AO00555 2505 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms