RNA–Protein interactions for RNA: ENST00000557422.1

RTN1-208, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-208ENST00000557422 IFNA1P01562 189 aa8.19□□□□□ -1.1
RTN1-208ENST00000557422 SNRPCP09234 159 aaKnown RBP8.19□□□□□ -1.1
RTN1-208ENST00000557422 LINC00869P0C866 280 aa8.19□□□□□ -1.1
RTN1-208ENST00000557422 EVI2AP22794 236 aa8.19□□□□□ -1.1
RTN1-208ENST00000557422 CDC34P49427 236 aaPredicted RBP8.19□□□□□ -1.1
RTN1-208ENST00000557422 MRPL23Q16540 153 aaKnown RBP8.19□□□□□ -1.1
RTN1-208ENST00000557422 GUK1Q16774 197 aa8.19□□□□□ -1.1
RTN1-208ENST00000557422 LCN15Q6UWW0 184 aa8.19□□□□□ -1.1
RTN1-208ENST00000557422 PATE2Q6UY27 113 aa8.19□□□□□ -1.1
RTN1-208ENST00000557422 OR1L4Q8NGR5 311 aa8.19□□□□□ -1.1
RTN1-208ENST00000557422 PFDN5Q99471 154 aa8.19□□□□□ -1.1
RTN1-208ENST00000557422 SLC50A1Q9BRV3 221 aa8.19□□□□□ -1.1
RTN1-208ENST00000557422 MAP1LC3BQ9GZQ8 125 aa8.19□□□□□ -1.1
RTN1-208ENST00000557422 PRO0255Q9UI72 69 aa8.19□□□□□ -1.1
RTN1-208ENST00000557422 TMEM218A2RU14 115 aa8.18□□□□□ -1.1
RTN1-208ENST00000557422 RBFOX3A6NFN3 312 aa8.18□□□□□ -1.1
RTN1-208ENST00000557422 IGHV3-53P01767 116 aa8.18□□□□□ -1.1
RTN1-208ENST00000557422 LEPP41159 167 aa8.18□□□□□ -1.1
RTN1-208ENST00000557422 CRYBA4P53673 196 aa8.18□□□□□ -1.1
RTN1-208ENST00000557422 ZNF726P1Q15940 193 aa8.18□□□□□ -1.1
RTN1-208ENST00000557422 KHDC3LQ587J8 217 aa8.18□□□□□ -1.1
RTN1-208ENST00000557422 TOR2AQ5JU69 321 aa8.18□□□□□ -1.1
RTN1-208ENST00000557422 FAM122CQ6P4D5 195 aa8.18□□□□□ -1.1
RTN1-208ENST00000557422 NEGR1Q7Z3B1 354 aa8.18□□□□□ -1.1
RTN1-208ENST00000557422 S100A7AQ86SG5 101 aa8.18□□□□□ -1.1
RTN1-208ENST00000557422 WFDC10BQ8IUB3 73 aa8.18□□□□□ -1.1
RTN1-208ENST00000557422 RAB24Q969Q5 203 aa8.18□□□□□ -1.1
RTN1-208ENST00000557422 ODF3Q96PU9 254 aa8.18□□□□□ -1.1
RTN1-208ENST00000557422 MRPL32Q9BYC8 188 aaKnown RBP8.18□□□□□ -1.1
RTN1-208ENST00000557422 KLF12Q9Y4X4 402 aa8.18□□□□□ -1.1
RTN1-208ENST00000557422 SLC17A3O00476 420 aa8.17□□□□□ -1.1
RTN1-208ENST00000557422 SPINK4O60575 86 aa8.17□□□□□ -1.1
RTN1-208ENST00000557422 CXorf1O96002 111 aa8.17□□□□□ -1.1
RTN1-208ENST00000557422 STAG3L2P0CL84 134 aa8.17□□□□□ -1.1
RTN1-208ENST00000557422 STAG3L3P0CL85 134 aa8.17□□□□□ -1.1
RTN1-208ENST00000557422 TAS2R45P59539 299 aa8.17□□□□□ -1.1
RTN1-208ENST00000557422 SLAQ13239 276 aa8.17□□□□□ -1.1
RTN1-208ENST00000557422 ZNF506Q5JVG8 444 aa8.17□□□□□ -1.1
RTN1-208ENST00000557422 LINC00528Q8N1L1 170 aa8.17□□□□□ -1.1
RTN1-208ENST00000557422 C8orf49Q96NF6 230 aa8.17□□□□□ -1.1
RTN1-208ENST00000557422 TXNDC17Q9BRA2 123 aa8.17□□□□□ -1.1
RTN1-208ENST00000557422 EIF5A2Q9GZV4 153 aaKnown RBP8.17□□□□□ -1.1
RTN1-208ENST00000557422 DNAJC4Q9NNZ3 241 aa8.17□□□□□ -1.1
RTN1-208ENST00000557422 TREM1Q9NP99 234 aa8.17□□□□□ -1.1
RTN1-208ENST00000557422 MANBALQ9NQG1 85 aa8.17□□□□□ -1.1
RTN1-208ENST00000557422 PLA2G2DQ9UNK4 145 aa8.17□□□□□ -1.1
RTN1-208ENST00000557422 HHLA3Q9XRX5 114 aa8.17□□□□□ -1.1
RTN1-208ENST00000557422 HMCN2Q8NDA2 5059 aa8.17□□□□□ -1.1
RTN1-208ENST00000557422 H3BTX0 84 aa8.16□□□□□ -1.1
RTN1-208ENST00000557422 CRYGDP07320 174 aa8.16□□□□□ -1.1
RTN1-208ENST00000557422 CCL20P78556 96 aa8.16□□□□□ -1.1
RTN1-208ENST00000557422 FHL2Q14192 279 aa8.16□□□□□ -1.1
RTN1-208ENST00000557422 ANXA2RQ3ZCQ2 193 aa8.16□□□□□ -1.1
RTN1-208ENST00000557422 C10orf91Q5T1B1 145 aa8.16□□□□□ -1.1
RTN1-208ENST00000557422 SUN5Q8TC36 379 aa8.16□□□□□ -1.1
RTN1-208ENST00000557422 SEC11CQ9BY50 192 aa8.16□□□□□ -1.1
RTN1-208ENST00000557422 RNF24Q9Y225 148 aa8.16□□□□□ -1.1
RTN1-208ENST00000557422 C7orf71A4D174 169 aa8.15□□□□□ -1.1
RTN1-208ENST00000557422 PSCAO43653 123 aa8.15□□□□□ -1.1
RTN1-208ENST00000557422 SLC25A5P05141 298 aaKnown RBP8.15□□□□□ -1.1
RTN1-208ENST00000557422 BCL2P10415 239 aa8.15□□□□□ -1.1
RTN1-208ENST00000557422 TCL1AP56279 114 aa8.15□□□□□ -1.1
RTN1-208ENST00000557422 PQLC2Q6ZP29 291 aa8.15□□□□□ -1.1
RTN1-208ENST00000557422 Q8N814 137 aa8.15□□□□□ -1.1
RTN1-208ENST00000557422 VAX2Q9UIW0 290 aa8.15□□□□□ -1.1
RTN1-208ENST00000557422 ARL2-SNX15V9GYD0 113 aa8.15□□□□□ -1.1
RTN1-208ENST00000557422 DNAH8Q96JB1 4490 aa8.15□□□□□ -1.1
RTN1-208ENST00000557422 LRP1Q07954 4544 aaKnown RBP8.15□□□□□ -1.11
RTN1-208ENST00000557422 H3BQ15 152 aa8.14□□□□□ -1.11
RTN1-208ENST00000557422 COX7A2P2O60397 106 aa8.14□□□□□ -1.11
RTN1-208ENST00000557422 SRSF3P84103 164 aaKnown RBP8.14□□□□□ -1.11
RTN1-208ENST00000557422 GCSAMLQ5JQS6 135 aa8.14□□□□□ -1.11
RTN1-208ENST00000557422 C10orf113Q5VZT2 155 aa8.14□□□□□ -1.11
RTN1-208ENST00000557422 Q6ZSA8 131 aa8.14□□□□□ -1.11
RTN1-208ENST00000557422 LINC00305Q7Z4B0 112 aa8.14□□□□□ -1.11
RTN1-208ENST00000557422 BPIFA4PQ86YQ2 179 aa8.14□□□□□ -1.11
RTN1-208ENST00000557422 C10orf126Q8N4M7 172 aa8.14□□□□□ -1.11
RTN1-208ENST00000557422 VGLL1Q99990 258 aa8.14□□□□□ -1.11
RTN1-208ENST00000557422 TMEM167BQ9NRX6 74 aa8.14□□□□□ -1.11
RTN1-208ENST00000557422 MRPL16Q9NX20 251 aaKnown RBP8.14□□□□□ -1.11
RTN1-208ENST00000557422 GNG13Q9P2W3 67 aa8.14□□□□□ -1.11
RTN1-208ENST00000557422 CARHSP1Q9Y2V2 147 aaKnown RBP8.14□□□□□ -1.11
RTN1-208ENST00000557422 A0A1B0GV50 99 aa8.13□□□□□ -1.11
RTN1-208ENST00000557422 F8W036 122 aa8.13□□□□□ -1.11
RTN1-208ENST00000557422 K7EQD1 137 aa8.13□□□□□ -1.11
RTN1-208ENST00000557422 OXTP01178 125 aa8.13□□□□□ -1.11
RTN1-208ENST00000557422 SFTA3P0C7M3 94 aa8.13□□□□□ -1.11
RTN1-208ENST00000557422 IGLC2P0DOY2 106 aa8.13□□□□□ -1.11
RTN1-208ENST00000557422 SRIP30626 198 aa8.13□□□□□ -1.11
RTN1-208ENST00000557422 FGF8P55075 233 aaPredicted RBP8.13□□□□□ -1.11
RTN1-208ENST00000557422 IBA57Q5T440 356 aaKnown RBP8.13□□□□□ -1.11
RTN1-208ENST00000557422 MORN5Q5VZ52 161 aa8.13□□□□□ -1.11
RTN1-208ENST00000557422 TMEM37Q8WXS4 190 aa8.13□□□□□ -1.11
RTN1-208ENST00000557422 KLLNB2CW77 178 aa8.12□□□□□ -1.11
RTN1-208ENST00000557422 TMEM250H0YL14 139 aa8.12□□□□□ -1.11
RTN1-208ENST00000557422 SRP19P09132 144 aaKnown RBP8.12□□□□□ -1.11
RTN1-208ENST00000557422 RNASE4P34096 147 aaKnown RBP8.12□□□□□ -1.11
RTN1-208ENST00000557422 MEF2BQ02080 365 aaPredicted RBP8.12□□□□□ -1.11
RTN1-208ENST00000557422 BTN1A1Q13410 526 aa8.12□□□□□ -1.11
RTN1-208ENST00000557422 SVBPQ8N300 66 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms