RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 LINC00467Q9BRT7 94 aa10.01□□□□□ -0.81
SLIRP-207ENST00000556831 TCEAL7Q9BRU2 100 aa10.01□□□□□ -0.81
SLIRP-207ENST00000556831 MAP1LC3BQ9GZQ8 125 aa10.01□□□□□ -0.81
SLIRP-207ENST00000556831 KIAA1109Q2LD37 5005 aa10.01□□□□□ -0.81
SLIRP-207ENST00000556831 RBFOX3A6NFN3 312 aa10□□□□□ -0.81
SLIRP-207ENST00000556831 P0DMU3 169 aa10□□□□□ -0.81
SLIRP-207ENST00000556831 FAM231AP0DMU4 169 aa10□□□□□ -0.81
SLIRP-207ENST00000556831 FAM231CP0DMU5 169 aa10□□□□□ -0.81
SLIRP-207ENST00000556831 SUMO1P63165 101 aaKnown RBP10□□□□□ -0.81
SLIRP-207ENST00000556831 ZNF415Q09FC8 603 aa10□□□□□ -0.81
SLIRP-207ENST00000556831 PNRC1Q12796 327 aaPredicted RBP10□□□□□ -0.81
SLIRP-207ENST00000556831 ANXA2RQ3ZCQ2 193 aa10□□□□□ -0.81
SLIRP-207ENST00000556831 ZNF506Q5JVG8 444 aa10□□□□□ -0.81
SLIRP-207ENST00000556831 FAM159AQ6UWV7 190 aa10□□□□□ -0.81
SLIRP-207ENST00000556831 UBE2DNLQ8IWF7 75 aa10□□□□□ -0.81
SLIRP-207ENST00000556831 RPS10P5Q9NQ39 176 aa10□□□□□ -0.81
SLIRP-207ENST00000556831 NAGKQ9UJ70 344 aa10□□□□□ -0.81
SLIRP-207ENST00000556831 TRGV2A0A075B6R0 118 aa9.99□□□□□ -0.81
SLIRP-207ENST00000556831 A0A087WWC5 75 aa9.99□□□□□ -0.81
SLIRP-207ENST00000556831 A0A1W2PRE2 83 aa9.99□□□□□ -0.81
SLIRP-207ENST00000556831 GAGE12BA1L429 117 aa9.99□□□□□ -0.81
SLIRP-207ENST00000556831 FBLL1A6NHQ2 334 aaKnown RBP9.99□□□□□ -0.81
SLIRP-207ENST00000556831 ZNF324O75467 553 aaPredicted RBP9.99□□□□□ -0.81
SLIRP-207ENST00000556831 GAGE7O76087 117 aa9.99□□□□□ -0.81
SLIRP-207ENST00000556831 TCRAP04437 139 aa9.99□□□□□ -0.81
SLIRP-207ENST00000556831 GAGE12FP0CL80 117 aa9.99□□□□□ -0.81
SLIRP-207ENST00000556831 GAGE12GP0CL81 117 aa9.99□□□□□ -0.81
SLIRP-207ENST00000556831 GAGE12IP0CL82 117 aa9.99□□□□□ -0.81
SLIRP-207ENST00000556831 FGF8P55075 233 aaPredicted RBP9.99□□□□□ -0.81
SLIRP-207ENST00000556831 UBE2G2P60604 165 aa9.99□□□□□ -0.81
SLIRP-207ENST00000556831 SRSF3P84103 164 aaKnown RBP9.99□□□□□ -0.81
SLIRP-207ENST00000556831 PRR9Q5T870 116 aa9.99□□□□□ -0.81
SLIRP-207ENST00000556831 TMEM88Q6PEY1 159 aa9.99□□□□□ -0.81
SLIRP-207ENST00000556831 SSX7Q7RTT5 188 aa9.99□□□□□ -0.81
SLIRP-207ENST00000556831 CYB561D1Q8N8Q1 229 aa9.99□□□□□ -0.81
SLIRP-207ENST00000556831 C15orf53Q8NAA6 179 aa9.99□□□□□ -0.81
SLIRP-207ENST00000556831 ATG101Q9BSB4 218 aa9.99□□□□□ -0.81
SLIRP-207ENST00000556831 DNAH6Q9C0G6 4158 aa9.99□□□□□ -0.81
SLIRP-207ENST00000556831 TRGV11A0A075B6L2 103 aa9.98□□□□□ -0.81
SLIRP-207ENST00000556831 TRAV8-1A0A0A6YYK1 113 aa9.98□□□□□ -0.81
SLIRP-207ENST00000556831 TRAV21A0A0B4J279 112 aa9.98□□□□□ -0.81
SLIRP-207ENST00000556831 GGTLC3B5MD39 225 aa9.98□□□□□ -0.81
SLIRP-207ENST00000556831 S100A8P05109 93 aa9.98□□□□□ -0.81
SLIRP-207ENST00000556831 S100A6P06703 90 aa9.98□□□□□ -0.81
SLIRP-207ENST00000556831 DAZ2Q13117 558 aaKnown RBP9.98□□□□□ -0.81
SLIRP-207ENST00000556831 ZNF726P1Q15940 193 aa9.98□□□□□ -0.81
SLIRP-207ENST00000556831 MUC21Q5SSG8 566 aa9.98□□□□□ -0.81
SLIRP-207ENST00000556831 IBA57Q5T440 356 aaKnown RBP9.98□□□□□ -0.81
SLIRP-207ENST00000556831 CBLN2Q8IUK8 224 aa9.98□□□□□ -0.81
SLIRP-207ENST00000556831 GSN-AS1Q9NRJ2 163 aa9.98□□□□□ -0.81
SLIRP-207ENST00000556831 ABCA13Q86UQ4 5058 aa9.97□□□□□ -0.81
SLIRP-207ENST00000556831 TRGV1A0A0A0MS02 117 aa9.97□□□□□ -0.81
SLIRP-207ENST00000556831 C7orf77A4D0Y5 90 aa9.97□□□□□ -0.81
SLIRP-207ENST00000556831 F6UZH7 168 aa9.97□□□□□ -0.81
SLIRP-207ENST00000556831 Q6AWC8 147 aa9.97□□□□□ -0.81
SLIRP-207ENST00000556831 EPDR1Q9UM22 224 aa9.97□□□□□ -0.81
SLIRP-207ENST00000556831 DNAH2Q9P225 4427 aa9.96□□□□□ -0.81
SLIRP-207ENST00000556831 TCL1AP56279 114 aa9.96□□□□□ -0.82
SLIRP-207ENST00000556831 S100A12P80511 92 aa9.96□□□□□ -0.82
SLIRP-207ENST00000556831 OR5I1Q13606 314 aa9.96□□□□□ -0.82
SLIRP-207ENST00000556831 PRNTQ86SH4 94 aa9.96□□□□□ -0.82
SLIRP-207ENST00000556831 TMEM75Q8N9X5 138 aa9.96□□□□□ -0.82
SLIRP-207ENST00000556831 SFT2D1Q8WV19 159 aa9.96□□□□□ -0.82
SLIRP-207ENST00000556831 MBD3L1Q8WWY6 194 aa9.96□□□□□ -0.82
SLIRP-207ENST00000556831 SGK494Q96LW2 274 aa9.96□□□□□ -0.82
SLIRP-207ENST00000556831 TMPRSS5Q9H3S3 457 aa9.96□□□□□ -0.82
SLIRP-207ENST00000556831 PSG8Q9UQ74 426 aa9.96□□□□□ -0.82
SLIRP-207ENST00000556831 HECTD4Q9Y4D8 3996 aa9.96□□□□□ -0.82
SLIRP-207ENST00000556831 COLCA2A8K830 154 aa9.95□□□□□ -0.82
SLIRP-207ENST00000556831 NUDT3O95989 172 aa9.95□□□□□ -0.82
SLIRP-207ENST00000556831 S100A9P06702 114 aaKnown RBP9.95□□□□□ -0.82
SLIRP-207ENST00000556831 TMEM183BQ1AE95 376 aa9.95□□□□□ -0.82
SLIRP-207ENST00000556831 SAPCD1Q5SSQ6 148 aa9.95□□□□□ -0.82
SLIRP-207ENST00000556831 CST9LP1Q5W188 147 aa9.95□□□□□ -0.82
SLIRP-207ENST00000556831 Q6ZTI0 123 aa9.95□□□□□ -0.82
SLIRP-207ENST00000556831 TMEM183AQ8IXX5 376 aa9.95□□□□□ -0.82
SLIRP-207ENST00000556831 C11orf72Q8NBR9 251 aa9.95□□□□□ -0.82
SLIRP-207ENST00000556831 HIST1H2BAQ96A08 127 aa9.95□□□□□ -0.82
SLIRP-207ENST00000556831 TVP23CQ96ET8 276 aa9.95□□□□□ -0.82
SLIRP-207ENST00000556831 KCNS1Q96KK3 526 aa9.95□□□□□ -0.82
SLIRP-207ENST00000556831 SDF2L1Q9HCN8 221 aa9.95□□□□□ -0.82
SLIRP-207ENST00000556831 PEX7O00628 323 aa9.94□□□□□ -0.82
SLIRP-207ENST00000556831 UBE2G1P62253 170 aa9.94□□□□□ -0.82
SLIRP-207ENST00000556831 TP53TG3Q9ULZ0 132 aa9.94□□□□□ -0.82
SLIRP-207ENST00000556831 KLF12Q9Y4X4 402 aa9.94□□□□□ -0.82
SLIRP-207ENST00000556831 A0A1B0GV50 99 aa9.93□□□□□ -0.82
SLIRP-207ENST00000556831 GCGP01275 180 aa9.93□□□□□ -0.82
SLIRP-207ENST00000556831 SRP19P09132 144 aaKnown RBP9.93□□□□□ -0.82
SLIRP-207ENST00000556831 BCL2P10415 239 aa9.93□□□□□ -0.82
SLIRP-207ENST00000556831 RAB5AP20339 215 aa9.93□□□□□ -0.82
SLIRP-207ENST00000556831 FHITP49789 147 aa9.93□□□□□ -0.82
SLIRP-207ENST00000556831 LGALS9BQ3B8N2 356 aa9.93□□□□□ -0.82
SLIRP-207ENST00000556831 LINC00518Q8N0U6 118 aa9.93□□□□□ -0.82
SLIRP-207ENST00000556831 LINC00612Q8N6U2 182 aa9.93□□□□□ -0.82
SLIRP-207ENST00000556831 POM121L12Q8N7R1 296 aa9.93□□□□□ -0.82
SLIRP-207ENST00000556831 BTF3L4Q96K17 158 aa9.93□□□□□ -0.82
SLIRP-207ENST00000556831 SPXQ9BT56 116 aa9.93□□□□□ -0.82
SLIRP-207ENST00000556831 MANBALQ9NQG1 85 aa9.93□□□□□ -0.82
SLIRP-207ENST00000556831 TMEM242Q9NWH2 141 aa9.93□□□□□ -0.82
SLIRP-207ENST00000556831 MRPL16Q9NX20 251 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms