RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 SULT1A1P50225 295 aa9.56□□□□□ -0.88
RTN3-214ENST00000545432 CFAP126Q5VTH2 177 aa9.56□□□□□ -0.88
RTN3-214ENST00000545432 DAZ4Q86SG3 579 aaKnown RBP9.56□□□□□ -0.88
RTN3-214ENST00000545432 PTH2Q96A98 100 aa9.56□□□□□ -0.88
RTN3-214ENST00000545432 DAZ3Q9NR90 486 aaKnown RBP9.56□□□□□ -0.88
RTN3-214ENST00000545432 L7N2F9 121 aa9.55□□□□□ -0.88
RTN3-214ENST00000545432 TYMSP04818 313 aa9.55□□□□□ -0.88
RTN3-214ENST00000545432 RPL37AP61513 92 aaKnown RBP9.55□□□□□ -0.88
RTN3-214ENST00000545432 VAMP2P63027 116 aa9.55□□□□□ -0.88
RTN3-214ENST00000545432 BAXQ07812 192 aa9.55□□□□□ -0.88
RTN3-214ENST00000545432 IL15RAQ13261 267 aa9.55□□□□□ -0.88
RTN3-214ENST00000545432 ATP6V1FQ16864 119 aa9.55□□□□□ -0.88
RTN3-214ENST00000545432 DPPA3Q6W0C5 159 aa9.55□□□□□ -0.88
RTN3-214ENST00000545432 MIR17HGQ75NE6 70 aa9.55□□□□□ -0.88
RTN3-214ENST00000545432 PHYHIPLQ96FC7 376 aa9.55□□□□□ -0.88
RTN3-214ENST00000545432 SH3BGRL3Q9H299 93 aa9.55□□□□□ -0.88
RTN3-214ENST00000545432 LYRM2Q9NU23 88 aaPredicted RBP9.55□□□□□ -0.88
RTN3-214ENST00000545432 DIRC3C9JPN6 131 aa9.54□□□□□ -0.88
RTN3-214ENST00000545432 CSN1S1P47710 185 aa9.54□□□□□ -0.88
RTN3-214ENST00000545432 CAV2P51636 162 aa9.54□□□□□ -0.88
RTN3-214ENST00000545432 ATRAIDQ6UW56 229 aa9.54□□□□□ -0.88
RTN3-214ENST00000545432 Q6ZRU5 148 aa9.54□□□□□ -0.88
RTN3-214ENST00000545432 TMEM252Q8N6L7 170 aa9.54□□□□□ -0.88
RTN3-214ENST00000545432 TRAV21A0A0B4J279 112 aa9.53□□□□□ -0.88
RTN3-214ENST00000545432 UBE2L5PA0A1B0GUS4 154 aa9.53□□□□□ -0.88
RTN3-214ENST00000545432 GGTLC3B5MD39 225 aa9.53□□□□□ -0.88
RTN3-214ENST00000545432 H3BMQ9 156 aa9.53□□□□□ -0.88
RTN3-214ENST00000545432 FGF7P21781 194 aa9.53□□□□□ -0.88
RTN3-214ENST00000545432 BTCP35070 178 aa9.53□□□□□ -0.88
RTN3-214ENST00000545432 BCAP31P51572 246 aa9.53□□□□□ -0.88
RTN3-214ENST00000545432 NPCDR1Q9BY65 106 aa9.53□□□□□ -0.88
RTN3-214ENST00000545432 TRAV8-1A0A0A6YYK1 113 aa9.52□□□□□ -0.89
RTN3-214ENST00000545432 IGSF23A1L1A6 192 aa9.52□□□□□ -0.89
RTN3-214ENST00000545432 OR10J4P0C629 311 aa9.52□□□□□ -0.89
RTN3-214ENST00000545432 MGST1P10620 155 aaKnown RBP9.52□□□□□ -0.89
RTN3-214ENST00000545432 INPP1P49441 399 aa9.52□□□□□ -0.89
RTN3-214ENST00000545432 CNPY1Q3B7I2 92 aa9.52□□□□□ -0.89
RTN3-214ENST00000545432 ZNF876PQ49A33 203 aa9.52□□□□□ -0.89
RTN3-214ENST00000545432 ARL6IP6Q8N6S5 226 aa9.52□□□□□ -0.89
RTN3-214ENST00000545432 RMI2Q96E14 147 aa9.52□□□□□ -0.89
RTN3-214ENST00000545432 TVP23CQ96ET8 276 aa9.52□□□□□ -0.89
RTN3-214ENST00000545432 KCNS1Q96KK3 526 aa9.52□□□□□ -0.89
RTN3-214ENST00000545432 LSM5Q9Y4Y9 91 aaKnown RBP9.52□□□□□ -0.89
RTN3-214ENST00000545432 S100A5P33763 92 aa9.51□□□□□ -0.89
RTN3-214ENST00000545432 RANP62826 216 aaKnown RBP9.51□□□□□ -0.89
RTN3-214ENST00000545432 HBG1P69891 147 aa9.51□□□□□ -0.89
RTN3-214ENST00000545432 HBG2P69892 147 aa9.51□□□□□ -0.89
RTN3-214ENST00000545432 SDF2L1Q9HCN8 221 aa9.51□□□□□ -0.89
RTN3-214ENST00000545432 A0A087WWC5 75 aa9.5□□□□□ -0.89
RTN3-214ENST00000545432 DNAJC30Q96LL9 226 aa9.5□□□□□ -0.89
RTN3-214ENST00000545432 C9orf85Q96MD7 179 aa9.5□□□□□ -0.89
RTN3-214ENST00000545432 ATP5SQ99766 215 aa9.5□□□□□ -0.89
RTN3-214ENST00000545432 NAGKQ9UJ70 344 aa9.5□□□□□ -0.89
RTN3-214ENST00000545432 CCSO14618 274 aa9.49□□□□□ -0.89
RTN3-214ENST00000545432 SEC11BP0C7V7 166 aa9.49□□□□□ -0.89
RTN3-214ENST00000545432 PVALBP20472 110 aaPredicted RBP9.49□□□□□ -0.89
RTN3-214ENST00000545432 SPANXN2Q5MJ10 180 aa9.49□□□□□ -0.89
RTN3-214ENST00000545432 ZFP2Q6ZN57 461 aa9.49□□□□□ -0.89
RTN3-214ENST00000545432 NIT1Q86X76 327 aa9.49□□□□□ -0.89
RTN3-214ENST00000545432 C2orf50Q96LR7 162 aa9.49□□□□□ -0.89
RTN3-214ENST00000545432 IGHV3-73A0A0B4J1V6 119 aa9.48□□□□□ -0.89
RTN3-214ENST00000545432 C5orf51A6NDU8 294 aa9.48□□□□□ -0.89
RTN3-214ENST00000545432 PGPEP1LA6NFU8 196 aa9.48□□□□□ -0.89
RTN3-214ENST00000545432 PIK3CD-AS1Q5SR53 167 aa9.48□□□□□ -0.89
RTN3-214ENST00000545432 STX12Q86Y82 276 aa9.48□□□□□ -0.89
RTN3-214ENST00000545432 CYB561D1Q8N8Q1 229 aa9.48□□□□□ -0.89
RTN3-214ENST00000545432 OR10G9Q8NGN4 311 aa9.48□□□□□ -0.89
RTN3-214ENST00000545432 ASB13Q8WXK3 278 aa9.48□□□□□ -0.89
RTN3-214ENST00000545432 LINC00479Q96M42 142 aa9.48□□□□□ -0.89
RTN3-214ENST00000545432 C11orf21Q9P2W6 132 aa9.48□□□□□ -0.89
RTN3-214ENST00000545432 IGKV2D-24A0A075B6R9 120 aa9.47□□□□□ -0.89
RTN3-214ENST00000545432 CCDC160A6NGH7 325 aa9.47□□□□□ -0.89
RTN3-214ENST00000545432 C14orf177Q52M58 125 aa9.47□□□□□ -0.89
RTN3-214ENST00000545432 UFSP1Q6NVU6 142 aa9.47□□□□□ -0.89
RTN3-214ENST00000545432 CHCHD7Q9BUK0 85 aa9.47□□□□□ -0.89
RTN3-214ENST00000545432 Q9UF83 564 aa9.47□□□□□ -0.89
RTN3-214ENST00000545432 ZNF506Q5JVG8 444 aa9.46□□□□□ -0.9
RTN3-214ENST00000545432 SDHCQ99643 169 aaPredicted RBP9.46□□□□□ -0.9
RTN3-214ENST00000545432 TREM1Q9NP99 234 aa9.46□□□□□ -0.9
RTN3-214ENST00000545432 OTORQ9NRC9 128 aa9.46□□□□□ -0.9
RTN3-214ENST00000545432 GAGE12JA6NER3 117 aa9.45□□□□□ -0.9
RTN3-214ENST00000545432 OR7C2O60412 319 aa9.45□□□□□ -0.9
RTN3-214ENST00000545432 RNASE3P12724 160 aaKnown RBP9.45□□□□□ -0.9
RTN3-214ENST00000545432 NHLH2Q02577 135 aa9.45□□□□□ -0.9
RTN3-214ENST00000545432 GAGE1Q13065 139 aa9.45□□□□□ -0.9
RTN3-214ENST00000545432 GAGE4Q13068 117 aa9.45□□□□□ -0.9
RTN3-214ENST00000545432 GAGE5Q13069 117 aa9.45□□□□□ -0.9
RTN3-214ENST00000545432 RAB32Q13637 225 aa9.45□□□□□ -0.9
RTN3-214ENST00000545432 GAGE13Q4V321 117 aa9.45□□□□□ -0.9
RTN3-214ENST00000545432 C9orf163Q8N9P6 203 aa9.45□□□□□ -0.9
RTN3-214ENST00000545432 WDR61Q9GZS3 305 aaKnown RBP9.45□□□□□ -0.9
RTN3-214ENST00000545432 PARLQ9H300 379 aa9.45□□□□□ -0.9
RTN3-214ENST00000545432 KLK12Q9UKR0 248 aa9.45□□□□□ -0.9
RTN3-214ENST00000545432 RPH3ALQ9UNE2 315 aa9.45□□□□□ -0.9
RTN3-214ENST00000545432 PGPA6NDG6 321 aa9.44□□□□□ -0.9
RTN3-214ENST00000545432 F6UZH7 168 aa9.44□□□□□ -0.9
RTN3-214ENST00000545432 FGF8P55075 233 aaPredicted RBP9.44□□□□□ -0.9
RTN3-214ENST00000545432 DGAT2L7PQ6IED9 249 aa9.44□□□□□ -0.9
RTN3-214ENST00000545432 THAP6Q8TBB0 222 aa9.44□□□□□ -0.9
RTN3-214ENST00000545432 FAM25EA8MYX2 175 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 169.5 ms