RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 STAG3L2P0CL84 134 aa3.21□□□□□ -1.9
MDM2-228ENST00000542502 STAG3L3P0CL85 134 aa3.21□□□□□ -1.9
MDM2-228ENST00000542502 HLA-DRB4P13762 266 aa3.21□□□□□ -1.9
MDM2-228ENST00000542502 TFPI2P48307 235 aa3.21□□□□□ -1.9
MDM2-228ENST00000542502 FHITP49789 147 aa3.21□□□□□ -1.9
MDM2-228ENST00000542502 DEFB131AP59861 70 aa3.21□□□□□ -1.9
MDM2-228ENST00000542502 PSMG4Q5JS54 123 aa3.21□□□□□ -1.9
MDM2-228ENST00000542502 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.21□□□□□ -1.9
MDM2-228ENST00000542502 TMEM256Q8N2U0 113 aa3.21□□□□□ -1.9
MDM2-228ENST00000542502 RPP25LQ8N5L8 163 aaKnown RBP3.21□□□□□ -1.9
MDM2-228ENST00000542502 ZNF738Q8NE65 137 aa3.21□□□□□ -1.9
MDM2-228ENST00000542502 MBD3L1Q8WWY6 194 aa3.21□□□□□ -1.9
MDM2-228ENST00000542502 RPUSD4Q96CM3 377 aaKnown RBP3.21□□□□□ -1.9
MDM2-228ENST00000542502 FAM167A-AS1Q96KT0 104 aa3.21□□□□□ -1.9
MDM2-228ENST00000542502 LINC00052Q96N35 136 aa3.21□□□□□ -1.9
MDM2-228ENST00000542502 ODF3Q96PU9 254 aa3.21□□□□□ -1.9
MDM2-228ENST00000542502 C20orf144Q9BQM9 153 aa3.21□□□□□ -1.9
MDM2-228ENST00000542502 SAV1Q9H4B6 383 aaPredicted RBP3.21□□□□□ -1.9
MDM2-228ENST00000542502 MANBALQ9NQG1 85 aa3.21□□□□□ -1.9
MDM2-228ENST00000542502 CYTL1Q9NRR1 136 aa3.21□□□□□ -1.9
MDM2-228ENST00000542502 RFNGQ9Y644 331 aa3.21□□□□□ -1.9
MDM2-228ENST00000542502 HLA-DRB4X5D2U9 266 aa3.21□□□□□ -1.9
MDM2-228ENST00000542502 CMYA5Q8N3K9 4069 aa3.21□□□□□ -1.9
MDM2-228ENST00000542502 A0A0J9YX75 114 aa3.2□□□□□ -1.9
MDM2-228ENST00000542502 MAP1LC3B2A6NCE7 125 aa3.2□□□□□ -1.9
MDM2-228ENST00000542502 SMIM9A6NGZ8 99 aa3.2□□□□□ -1.9
MDM2-228ENST00000542502 H3BMM0 161 aa3.2□□□□□ -1.9
MDM2-228ENST00000542502 K7EIL1 84 aa3.2□□□□□ -1.9
MDM2-228ENST00000542502 SOCS3O14543 225 aa3.2□□□□□ -1.9
MDM2-228ENST00000542502 MRPS12O15235 138 aaKnown RBP3.2□□□□□ -1.9
MDM2-228ENST00000542502 NDUFS6O75380 124 aaKnown RBP3.2□□□□□ -1.9
MDM2-228ENST00000542502 CD7P09564 240 aa3.2□□□□□ -1.9
MDM2-228ENST00000542502 ARL14EPLP0DKL9 152 aa3.2□□□□□ -1.9
MDM2-228ENST00000542502 SULT1A2P50226 295 aa3.2□□□□□ -1.9
MDM2-228ENST00000542502 ACTL10Q5JWF8 245 aa3.2□□□□□ -1.9
MDM2-228ENST00000542502 TMEM78Q5T7P6 136 aa3.2□□□□□ -1.9
MDM2-228ENST00000542502 LINC00322Q6ZN03 302 aaPredicted RBP3.2□□□□□ -1.9
MDM2-228ENST00000542502 MIR17HGQ75NE6 70 aa3.2□□□□□ -1.9
MDM2-228ENST00000542502 C9orf62Q8N4C0 152 aa3.2□□□□□ -1.9
MDM2-228ENST00000542502 DEFB125Q8N687 156 aa3.2□□□□□ -1.9
MDM2-228ENST00000542502 C5orf17Q8NAS9 161 aa3.2□□□□□ -1.9
MDM2-228ENST00000542502 OR8A1Q8NGG7 326 aa3.2□□□□□ -1.9
MDM2-228ENST00000542502 FAM213BQ8TBF2 198 aa3.2□□□□□ -1.9
MDM2-228ENST00000542502 SFT2D1Q8WV19 159 aa3.2□□□□□ -1.9
MDM2-228ENST00000542502 HIST1H2BAQ96A08 127 aa3.2□□□□□ -1.9
MDM2-228ENST00000542502 FXYD5Q96DB9 178 aa3.2□□□□□ -1.9
MDM2-228ENST00000542502 NDFIP1Q9BT67 221 aa3.2□□□□□ -1.9
MDM2-228ENST00000542502 SLC25A2Q9BXI2 301 aa3.2□□□□□ -1.9
MDM2-228ENST00000542502 MAP1LC3BQ9GZQ8 125 aa3.2□□□□□ -1.9
MDM2-228ENST00000542502 SH3BGRL3Q9H299 93 aa3.2□□□□□ -1.9
MDM2-228ENST00000542502 OTORQ9NRC9 128 aa3.2□□□□□ -1.9
MDM2-228ENST00000542502 SELENOKQ9Y6D0 94 aa3.2□□□□□ -1.9
MDM2-228ENST00000542502 DNHD1Q96M86 4753 aa3.2□□□□□ -1.9
MDM2-228ENST00000542502 TRAV5A0A0B4J249 113 aa3.19□□□□□ -1.9
MDM2-228ENST00000542502 TEX48A0A1B0GUV7 120 aa3.19□□□□□ -1.9
MDM2-228ENST00000542502 TMEM189A5PLL7 270 aa3.19□□□□□ -1.9
MDM2-228ENST00000542502 A8MTW9 85 aa3.19□□□□□ -1.9
MDM2-228ENST00000542502 ZNF705EA8MWA4 302 aaPredicted RBP3.19□□□□□ -1.9
MDM2-228ENST00000542502 H3BQ15 152 aa3.19□□□□□ -1.9
MDM2-228ENST00000542502 PDE6DO43924 150 aa3.19□□□□□ -1.9
MDM2-228ENST00000542502 OR10J4P0C629 311 aa3.19□□□□□ -1.9
MDM2-228ENST00000542502 GCHFRP30047 84 aa3.19□□□□□ -1.9
MDM2-228ENST00000542502 LEPP41159 167 aa3.19□□□□□ -1.9
MDM2-228ENST00000542502 CDKN1BP46527 198 aa3.19□□□□□ -1.9
MDM2-228ENST00000542502 KRTAP10-8P60410 259 aa3.19□□□□□ -1.9
MDM2-228ENST00000542502 RAB14P61106 215 aa3.19□□□□□ -1.9
MDM2-228ENST00000542502 RANP62826 216 aaKnown RBP3.19□□□□□ -1.9
MDM2-228ENST00000542502 HAGHQ16775 308 aa3.19□□□□□ -1.9
MDM2-228ENST00000542502 GCSAMLQ5JQS6 135 aa3.19□□□□□ -1.9
MDM2-228ENST00000542502 SAPCD1Q5SSQ6 148 aa3.19□□□□□ -1.9
MDM2-228ENST00000542502 Q6ZRP5 223 aa3.19□□□□□ -1.9
MDM2-228ENST00000542502 KRTAP5-2Q701N4 177 aa3.19□□□□□ -1.9
MDM2-228ENST00000542502 APRG1Q8IVJ8 170 aa3.19□□□□□ -1.9
MDM2-228ENST00000542502 IQCF2Q8IXL9 164 aa3.19□□□□□ -1.9
MDM2-228ENST00000542502 OR4B1Q8NGF8 309 aa3.19□□□□□ -1.9
MDM2-228ENST00000542502 BLNKQ8WV28 456 aa3.19□□□□□ -1.9
MDM2-228ENST00000542502 RCHY1Q96PM5 261 aa3.19□□□□□ -1.9
MDM2-228ENST00000542502 Q9H3A6 140 aa3.19□□□□□ -1.9
MDM2-228ENST00000542502 SMDT1Q9H4I9 107 aa3.19□□□□□ -1.9
MDM2-228ENST00000542502 ZNF586Q9NXT0 402 aa3.19□□□□□ -1.9
MDM2-228ENST00000542502 GOLT1BQ9Y3E0 138 aa3.19□□□□□ -1.9
MDM2-228ENST00000542502 DNAH3Q8TD57 4116 aa3.19□□□□□ -1.9
MDM2-228ENST00000542502 TRAV8-2A0A0B4J237 113 aa3.18□□□□□ -1.9
MDM2-228ENST00000542502 A0A1B0GVG6 124 aa3.18□□□□□ -1.9
MDM2-228ENST00000542502 PGPA6NDG6 321 aa3.18□□□□□ -1.9
MDM2-228ENST00000542502 BOLA2-SMG1P6H3BVE0 249 aa3.18□□□□□ -1.9
MDM2-228ENST00000542502 CA1P00915 261 aaPredicted RBP3.18□□□□□ -1.9
MDM2-228ENST00000542502 INSP01308 110 aa3.18□□□□□ -1.9
MDM2-228ENST00000542502 PYYP10082 97 aa3.18□□□□□ -1.9
MDM2-228ENST00000542502 MIFP14174 115 aa3.18□□□□□ -1.9
MDM2-228ENST00000542502 GATA1P15976 413 aaPredicted RBP3.18□□□□□ -1.9
MDM2-228ENST00000542502 CNN1P51911 297 aaKnown RBP3.18□□□□□ -1.9
MDM2-228ENST00000542502 ZNF138P52744 262 aa3.18□□□□□ -1.9
MDM2-228ENST00000542502 HIST1H1AQ02539 215 aaPredicted RBP3.18□□□□□ -1.9
MDM2-228ENST00000542502 CYB561D1Q8N8Q1 229 aa3.18□□□□□ -1.9
MDM2-228ENST00000542502 SMIM12Q96EX1 92 aa3.18□□□□□ -1.9
MDM2-228ENST00000542502 FMC1Q96HJ9 113 aa3.18□□□□□ -1.9
MDM2-228ENST00000542502 IGF2BP2-AS1Q96M15 143 aa3.18□□□□□ -1.9
MDM2-228ENST00000542502 TM2D3Q9BRN9 247 aa3.18□□□□□ -1.9
MDM2-228ENST00000542502 NIPSNAP3BQ9BS92 247 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms