RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 MLST8Q9BVC4 326 aa11.06□□□□□ -0.64
DDB1-218ENST00000540784 SDF2L1Q9HCN8 221 aa11.06□□□□□ -0.64
DDB1-218ENST00000540784 ORM1P02763 201 aa11.05□□□□□ -0.64
DDB1-218ENST00000540784 DEFB130BP0DP73 79 aa11.05□□□□□ -0.64
DDB1-218ENST00000540784 DEFB130AP0DP74 79 aa11.05□□□□□ -0.64
DDB1-218ENST00000540784 DAD1P61803 113 aa11.05□□□□□ -0.64
DDB1-218ENST00000540784 C11orf72Q8NBR9 251 aa11.05□□□□□ -0.64
DDB1-218ENST00000540784 PHLDA1Q8WV24 401 aaPredicted RBP11.05□□□□□ -0.64
DDB1-218ENST00000540784 MDFICQ9P1T7 246 aa11.05□□□□□ -0.64
DDB1-218ENST00000540784 C11orf21Q9P2W6 132 aa11.05□□□□□ -0.64
DDB1-218ENST00000540784 TMEM250H0YL14 139 aa11.04□□□□□ -0.64
DDB1-218ENST00000540784 SH2D1AO60880 128 aa11.04□□□□□ -0.64
DDB1-218ENST00000540784 GNG4P50150 75 aa11.04□□□□□ -0.64
DDB1-218ENST00000540784 TCL1AP56279 114 aa11.04□□□□□ -0.64
DDB1-218ENST00000540784 ZNF415Q09FC8 603 aa11.04□□□□□ -0.64
DDB1-218ENST00000540784 ZNF674Q2M3X9 581 aa11.04□□□□□ -0.64
DDB1-218ENST00000540784 CENPWQ5EE01 88 aa11.04□□□□□ -0.64
DDB1-218ENST00000540784 CASC10Q5T4H9 136 aa11.04□□□□□ -0.64
DDB1-218ENST00000540784 CEMP1Q6PRD7 247 aaPredicted RBP11.04□□□□□ -0.64
DDB1-218ENST00000540784 Q6ZTC4 211 aa11.04□□□□□ -0.64
DDB1-218ENST00000540784 IGHV3-16A0A0C4DH30 117 aa11.03□□□□□ -0.64
DDB1-218ENST00000540784 NDUFS6O75380 124 aaKnown RBP11.03□□□□□ -0.64
DDB1-218ENST00000540784 TYMSP04818 313 aa11.03□□□□□ -0.64
DDB1-218ENST00000540784 PEA15Q15121 130 aa11.03□□□□□ -0.64
DDB1-218ENST00000540784 TRAV10A0A0B4J240 114 aa11.02□□□□□ -0.65
DDB1-218ENST00000540784 IGKV3D-20A0A0C4DH25 116 aa11.02□□□□□ -0.65
DDB1-218ENST00000540784 GAGE12BA1L429 117 aa11.02□□□□□ -0.65
DDB1-218ENST00000540784 NUPR2A6NF83 97 aa11.02□□□□□ -0.65
DDB1-218ENST00000540784 GAGE7O76087 117 aa11.02□□□□□ -0.65
DDB1-218ENST00000540784 GAGE12FP0CL80 117 aa11.02□□□□□ -0.65
DDB1-218ENST00000540784 GAGE12GP0CL81 117 aa11.02□□□□□ -0.65
DDB1-218ENST00000540784 GAGE12IP0CL82 117 aa11.02□□□□□ -0.65
DDB1-218ENST00000540784 MGST1P10620 155 aaKnown RBP11.02□□□□□ -0.65
DDB1-218ENST00000540784 CEBPGP53567 150 aa11.02□□□□□ -0.65
DDB1-218ENST00000540784 IFITM2Q01629 132 aa11.02□□□□□ -0.65
DDB1-218ENST00000540784 SPXQ9BT56 116 aa11.02□□□□□ -0.65
DDB1-218ENST00000540784 KLK5Q9Y337 293 aaPredicted RBP11.02□□□□□ -0.65
DDB1-218ENST00000540784 DEFB131BA0A096LNP1 70 aa11.01□□□□□ -0.65
DDB1-218ENST00000540784 TRGV1A0A0A0MS02 117 aa11.01□□□□□ -0.65
DDB1-218ENST00000540784 B4DEV8 164 aa11.01□□□□□ -0.65
DDB1-218ENST00000540784 KRBOX1C9JBD0 128 aa11.01□□□□□ -0.65
DDB1-218ENST00000540784 SPINK4O60575 86 aa11.01□□□□□ -0.65
DDB1-218ENST00000540784 SRP19P09132 144 aaKnown RBP11.01□□□□□ -0.65
DDB1-218ENST00000540784 LGALS9BQ3B8N2 356 aa11.01□□□□□ -0.65
DDB1-218ENST00000540784 PRR27Q6MZM9 219 aa11.01□□□□□ -0.65
DDB1-218ENST00000540784 SMIM12Q96EX1 92 aa11.01□□□□□ -0.65
DDB1-218ENST00000540784 M0R036 132 aa11□□□□□ -0.65
DDB1-218ENST00000540784 IGLV2-8P01709 118 aa11□□□□□ -0.65
DDB1-218ENST00000540784 HTN3P15516 51 aa11□□□□□ -0.65
DDB1-218ENST00000540784 CLLU1Q5K131 121 aa11□□□□□ -0.65
DDB1-218ENST00000540784 Q6ZTI0 123 aa11□□□□□ -0.65
DDB1-218ENST00000540784 LINC00612Q8N6U2 182 aa11□□□□□ -0.65
DDB1-218ENST00000540784 DAZAP1Q96EP5 407 aaKnown RBP11□□□□□ -0.65
DDB1-218ENST00000540784 PARLQ9H300 379 aa11□□□□□ -0.65
DDB1-218ENST00000540784 SMDT1Q9H4I9 107 aa11□□□□□ -0.65
DDB1-218ENST00000540784 BIN3Q9NQY0 253 aa11□□□□□ -0.65
DDB1-218ENST00000540784 DNAH7Q8WXX0 4024 aa11□□□□□ -0.65
DDB1-218ENST00000540784 TRBV20OR9-2A0A075B6H5 130 aa10.99□□□□□ -0.65
DDB1-218ENST00000540784 TRGV2A0A075B6R0 118 aa10.99□□□□□ -0.65
DDB1-218ENST00000540784 S100A4P26447 101 aaKnown RBP10.99□□□□□ -0.65
DDB1-218ENST00000540784 OR5I1Q13606 314 aa10.99□□□□□ -0.65
DDB1-218ENST00000540784 OCC1Q8TAD7 63 aa10.99□□□□□ -0.65
DDB1-218ENST00000540784 TMSB15BA0A087X1C1 80 aa10.98□□□□□ -0.65
DDB1-218ENST00000540784 PGPEP1LA6NFU8 196 aa10.98□□□□□ -0.65
DDB1-218ENST00000540784 C9JCJ5 164 aa10.98□□□□□ -0.65
DDB1-218ENST00000540784 M0R2P5 195 aa10.98□□□□□ -0.65
DDB1-218ENST00000540784 ATP5G1P05496 136 aa10.98□□□□□ -0.65
DDB1-218ENST00000540784 ASIPP42127 132 aa10.98□□□□□ -0.65
DDB1-218ENST00000540784 LINC01559Q495D7 138 aa10.98□□□□□ -0.65
DDB1-218ENST00000540784 MRPL16Q9NX20 251 aaKnown RBP10.98□□□□□ -0.65
DDB1-218ENST00000540784 GRIFINA4D1Z8 144 aa10.97□□□□□ -0.65
DDB1-218ENST00000540784 ZNF727A8MUV8 499 aa10.97□□□□□ -0.65
DDB1-218ENST00000540784 IGLL5B9A064 214 aa10.97□□□□□ -0.65
DDB1-218ENST00000540784 SRSF3P84103 164 aaKnown RBP10.97□□□□□ -0.65
DDB1-218ENST00000540784 RASL10AQ92737 203 aa10.97□□□□□ -0.65
DDB1-218ENST00000540784 SMIM7Q9BQ49 75 aa10.97□□□□□ -0.65
DDB1-218ENST00000540784 C9JQL5 133 aa10.96□□□□□ -0.65
DDB1-218ENST00000540784 F5H768 121 aa10.96□□□□□ -0.65
DDB1-218ENST00000540784 RNASE3P12724 160 aaKnown RBP10.96□□□□□ -0.65
DDB1-218ENST00000540784 FAM74A3Q4VXF1 159 aa10.96□□□□□ -0.65
DDB1-218ENST00000540784 DNLZQ5SXM8 178 aa10.96□□□□□ -0.65
DDB1-218ENST00000540784 C9orf85Q96MD7 179 aa10.96□□□□□ -0.65
DDB1-218ENST00000540784 C18orf15Q96N68 181 aa10.96□□□□□ -0.65
DDB1-218ENST00000540784 ARMS2P0C7Q2 107 aa10.95□□□□□ -0.66
DDB1-218ENST00000540784 ZNF876PQ49A33 203 aa10.95□□□□□ -0.66
DDB1-218ENST00000540784 ZNF575Q86XF7 245 aa10.95□□□□□ -0.66
DDB1-218ENST00000540784 IL36BQ9NZH7 164 aa10.95□□□□□ -0.66
DDB1-218ENST00000540784 LY96Q9Y6Y9 160 aa10.95□□□□□ -0.66
DDB1-218ENST00000540784 C19orf71A6NCJ1 209 aa10.94□□□□□ -0.66
DDB1-218ENST00000540784 P01737 135 aa10.94□□□□□ -0.66
DDB1-218ENST00000540784 RPL19P84098 196 aaKnown RBP10.94□□□□□ -0.66
DDB1-218ENST00000540784 TMEM241Q24JQ0 296 aa10.94□□□□□ -0.66
DDB1-218ENST00000540784 PTH2Q96A98 100 aa10.94□□□□□ -0.66
DDB1-218ENST00000540784 FAM210BQ96KR6 192 aa10.94□□□□□ -0.66
DDB1-218ENST00000540784 H3BVH4 76 aa10.93□□□□□ -0.66
DDB1-218ENST00000540784 K7EN84 100 aa10.93□□□□□ -0.66
DDB1-218ENST00000540784 TCTAP57738 103 aa10.93□□□□□ -0.66
DDB1-218ENST00000540784 RPS20P60866 119 aaKnown RBP10.93□□□□□ -0.66
DDB1-218ENST00000540784 NUDT10Q8NFP7 164 aa10.93□□□□□ -0.66
DDB1-218ENST00000540784 OR2D3Q8NGH3 330 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms