RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 MYMXA0A1B0GTQ4 84 aa5.1□□□□□ -1.59
USP28-202ENST00000535607 H7C1H1 209 aa5.1□□□□□ -1.59
USP28-202ENST00000535607 M0QXV9 152 aa5.1□□□□□ -1.59
USP28-202ENST00000535607 NDUFB3O43676 98 aa5.1□□□□□ -1.59
USP28-202ENST00000535607 ENSAO43768 121 aaKnown RBP5.1□□□□□ -1.59
USP28-202ENST00000535607 GOSR1O95249 250 aa5.1□□□□□ -1.59
USP28-202ENST00000535607 RBP4P02753 201 aa5.1□□□□□ -1.59
USP28-202ENST00000535607 TFF1P04155 84 aa5.1□□□□□ -1.59
USP28-202ENST00000535607 SLC25A16P16260 332 aa5.1□□□□□ -1.59
USP28-202ENST00000535607 RPL7P18124 248 aaKnown RBP5.1□□□□□ -1.59
USP28-202ENST00000535607 HERVK_113P61574 105 aa5.1□□□□□ -1.59
USP28-202ENST00000535607 PAX8Q06710 450 aa5.1□□□□□ -1.59
USP28-202ENST00000535607 LAGE3Q14657 143 aa5.1□□□□□ -1.59
USP28-202ENST00000535607 TEX36Q5VZQ5 186 aa5.1□□□□□ -1.59
USP28-202ENST00000535607 CFAP46Q8IYW2 2715 aa5.1□□□□□ -1.59
USP28-202ENST00000535607 GAFA1Q96PS6 74 aa5.1□□□□□ -1.59
USP28-202ENST00000535607 SMG1Q96Q15 3661 aaKnown RBP5.1□□□□□ -1.59
USP28-202ENST00000535607 KRTAP4-11Q9BYQ6 195 aa5.1□□□□□ -1.59
USP28-202ENST00000535607 HHLA3Q9XRX5 114 aa5.1□□□□□ -1.59
USP28-202ENST00000535607 ATRXP46100 2492 aa5.09□□□□□ -1.59
USP28-202ENST00000535607 COL6A6A6NMZ7 2263 aa5.09□□□□□ -1.59
USP28-202ENST00000535607 DOCK7Q96N67 2140 aa5.09□□□□□ -1.59
USP28-202ENST00000535607 DYSFO75923 2080 aa5.09□□□□□ -1.59
USP28-202ENST00000535607 TRAV8-1A0A0A6YYK1 113 aa5.09□□□□□ -1.59
USP28-202ENST00000535607 A0A1W2PPI3 338 aa5.09□□□□□ -1.59
USP28-202ENST00000535607 FABP5P3A8MUU1 101 aa5.09□□□□□ -1.59
USP28-202ENST00000535607 A8MWV9 139 aa5.09□□□□□ -1.59
USP28-202ENST00000535607 INAFM1C9JVW0 142 aa5.09□□□□□ -1.59
USP28-202ENST00000535607 H3BRN7 92 aa5.09□□□□□ -1.59
USP28-202ENST00000535607 VCYO14598 125 aa5.09□□□□□ -1.59
USP28-202ENST00000535607 TIMM23O14925 209 aa5.09□□□□□ -1.59
USP28-202ENST00000535607 SH2D1AO60880 128 aa5.09□□□□□ -1.59
USP28-202ENST00000535607 PPP1R17O96001 155 aa5.09□□□□□ -1.59
USP28-202ENST00000535607 NPYP01303 97 aa5.09□□□□□ -1.59
USP28-202ENST00000535607 ZNF688P0C7X2 276 aa5.09□□□□□ -1.59
USP28-202ENST00000535607 FBXL19-AS1Q494R0 122 aa5.09□□□□□ -1.59
USP28-202ENST00000535607 ORMDL2Q53FV1 153 aa5.09□□□□□ -1.59
USP28-202ENST00000535607 SIGLEC15Q6ZMC9 328 aa5.09□□□□□ -1.59
USP28-202ENST00000535607 Q6ZUT4 128 aa5.09□□□□□ -1.59
USP28-202ENST00000535607 GTSCR1Q86UQ5 136 aa5.09□□□□□ -1.59
USP28-202ENST00000535607 TEN1Q86WV5 123 aa5.09□□□□□ -1.59
USP28-202ENST00000535607 EXOC3-AS1Q8N2X6 119 aa5.09□□□□□ -1.59
USP28-202ENST00000535607 C18orf15Q96N68 181 aa5.09□□□□□ -1.59
USP28-202ENST00000535607 ASCL2Q99929 193 aa5.09□□□□□ -1.59
USP28-202ENST00000535607 SPANXCQ9NY87 97 aa5.09□□□□□ -1.59
USP28-202ENST00000535607 FZR1Q9UM11 496 aa5.09□□□□□ -1.59
USP28-202ENST00000535607 IGLV3-9A0A075B6K5 115 aa5.08□□□□□ -1.6
USP28-202ENST00000535607 WI2-2373I1.2A0A1W2PRP0 233 aa5.08□□□□□ -1.6
USP28-202ENST00000535607 F8VRH5 84 aa5.08□□□□□ -1.6
USP28-202ENST00000535607 K7ERJ3 54 aa5.08□□□□□ -1.6
USP28-202ENST00000535607 SNCGO76070 127 aa5.08□□□□□ -1.6
USP28-202ENST00000535607 IGLV2-23P01705 113 aa5.08□□□□□ -1.6
USP28-202ENST00000535607 SCGB1C2P0DMR2 95 aa5.08□□□□□ -1.6
USP28-202ENST00000535607 PSMB2P49721 201 aa5.08□□□□□ -1.6
USP28-202ENST00000535607 SRSF9Q13242 221 aaKnown RBP eCLIP5.08□□□□□ -1.6
USP28-202ENST00000535607 ODF3L2Q3SX64 289 aa5.08□□□□□ -1.6
USP28-202ENST00000535607 TTC32Q5I0X7 151 aa5.08□□□□□ -1.6
USP28-202ENST00000535607 CFAP126Q5VTH2 177 aa5.08□□□□□ -1.6
USP28-202ENST00000535607 HCP5Q6MZN7 132 aa5.08□□□□□ -1.6
USP28-202ENST00000535607 SH2D6Q7Z4S9 175 aa5.08□□□□□ -1.6
USP28-202ENST00000535607 CCL13Q99616 98 aa5.08□□□□□ -1.6
USP28-202ENST00000535607 CNFNQ9BYD5 112 aa5.08□□□□□ -1.6
USP28-202ENST00000535607 PRO0461Q9UI25 63 aa5.08□□□□□ -1.6
USP28-202ENST00000535607 POLEQ07864 2286 aa5.08□□□□□ -1.6
USP28-202ENST00000535607 FREM1Q5H8C1 2179 aa5.08□□□□□ -1.6
USP28-202ENST00000535607 TRBV7-3A0A075B6L6 115 aa5.07□□□□□ -1.6
USP28-202ENST00000535607 LOC107984156A0A0G2JMH3 177 aa5.07□□□□□ -1.6
USP28-202ENST00000535607 TMEM213A2RRL7 107 aa5.07□□□□□ -1.6
USP28-202ENST00000535607 M0R1B8 84 aa5.07□□□□□ -1.6
USP28-202ENST00000535607 CCL21O00585 134 aa5.07□□□□□ -1.6
USP28-202ENST00000535607 ORM1P02763 201 aa5.07□□□□□ -1.6
USP28-202ENST00000535607 IGLC6P0CF74 106 aa5.07□□□□□ -1.6
USP28-202ENST00000535607 FAM106CPP0CH98 169 aa5.07□□□□□ -1.6
USP28-202ENST00000535607 LOXL1Q08397 574 aaPredicted RBP5.07□□□□□ -1.6
USP28-202ENST00000535607 GAGE2BQ13066 116 aa5.07□□□□□ -1.6
USP28-202ENST00000535607 FAM106AQ4KMX7 169 aa5.07□□□□□ -1.6
USP28-202ENST00000535607 GAGE2EQ4V326 116 aa5.07□□□□□ -1.6
USP28-202ENST00000535607 SCGB1D4Q6XE38 83 aa5.07□□□□□ -1.6
USP28-202ENST00000535607 PPP1R27Q86WC6 154 aa5.07□□□□□ -1.6
USP28-202ENST00000535607 ARL17AQ8IVW1 177 aa5.07□□□□□ -1.6
USP28-202ENST00000535607 DEFB108BQ8NET1 73 aa5.07□□□□□ -1.6
USP28-202ENST00000535607 GAGE2DQ9UEU5 116 aa5.07□□□□□ -1.6
USP28-202ENST00000535607 SLC25A15Q9Y619 301 aa5.07□□□□□ -1.6
USP28-202ENST00000535607 SVILO95425 2214 aa5.07□□□□□ -1.6
USP28-202ENST00000535607 DSCAML1Q8TD84 2053 aa5.06□□□□□ -1.6
USP28-202ENST00000535607 TMSB15BA0A087X1C1 80 aa5.06□□□□□ -1.6
USP28-202ENST00000535607 TRAV40A0A0B4J280 105 aa5.06□□□□□ -1.6
USP28-202ENST00000535607 RBAKDNA6NC62 111 aa5.06□□□□□ -1.6
USP28-202ENST00000535607 A8MZ25 164 aa5.06□□□□□ -1.6
USP28-202ENST00000535607 H3BTX0 84 aa5.06□□□□□ -1.6
USP28-202ENST00000535607 GAGE7O76087 117 aa5.06□□□□□ -1.6
USP28-202ENST00000535607 CNIH1O95406 144 aa5.06□□□□□ -1.6
USP28-202ENST00000535607 IGHV3-48P01763 117 aa5.06□□□□□ -1.6
USP28-202ENST00000535607 GAGE12FP0CL80 117 aa5.06□□□□□ -1.6
USP28-202ENST00000535607 GAGE12GP0CL81 117 aa5.06□□□□□ -1.6
USP28-202ENST00000535607 GAGE12IP0CL82 117 aa5.06□□□□□ -1.6
USP28-202ENST00000535607 CRIP1P50238 77 aa5.06□□□□□ -1.6
USP28-202ENST00000535607 MFAP4P55083 255 aa5.06□□□□□ -1.6
USP28-202ENST00000535607 GAGE4Q13068 117 aa5.06□□□□□ -1.6
USP28-202ENST00000535607 MRPL23Q16540 153 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms