RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 PITX3O75364 302 aa1.28□□□□□ -2.2
PTPN12-213ENST00000519553 CD2P06729 351 aa1.28□□□□□ -2.2
PTPN12-213ENST00000519553 PYYP10082 97 aa1.28□□□□□ -2.2
PTPN12-213ENST00000519553 FGF7P21781 194 aa1.28□□□□□ -2.2
PTPN12-213ENST00000519553 S100PP25815 95 aa1.28□□□□□ -2.2
PTPN12-213ENST00000519553 GUCA1AP43080 201 aaPredicted RBP1.28□□□□□ -2.2
PTPN12-213ENST00000519553 PRB3Q04118 309 aaPredicted RBP1.28□□□□□ -2.2
PTPN12-213ENST00000519553 KRTAP5-10Q6L8G5 202 aa1.28□□□□□ -2.2
PTPN12-213ENST00000519553 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.28□□□□□ -2.2
PTPN12-213ENST00000519553 CASC2Q6XLA1 102 aa1.28□□□□□ -2.2
PTPN12-213ENST00000519553 ZCCHC23Q6ZST2 131 aa1.28□□□□□ -2.2
PTPN12-213ENST00000519553 ATP6V0E2Q8NHE4 81 aa1.28□□□□□ -2.2
PTPN12-213ENST00000519553 DPH3Q96FX2 82 aa1.28□□□□□ -2.2
PTPN12-213ENST00000519553 LINC00052Q96N35 136 aa1.28□□□□□ -2.2
PTPN12-213ENST00000519553 SNRNP25Q9BV90 132 aaKnown RBP1.28□□□□□ -2.2
PTPN12-213ENST00000519553 ORMDL1Q9P0S3 153 aa1.28□□□□□ -2.2
PTPN12-213ENST00000519553 FGD6Q6ZV73 1430 aa1.28□□□□□ -2.2
PTPN12-213ENST00000519553 MBD5Q9P267 1494 aa1.28□□□□□ -2.2
PTPN12-213ENST00000519553 ADGRB2O60241 1585 aa1.28□□□□□ -2.2
PTPN12-213ENST00000519553 ARFGEF3Q5TH69 2177 aa1.27□□□□□ -2.21
PTPN12-213ENST00000519553 HEATR1Q9H583 2144 aaKnown RBP1.27□□□□□ -2.21
PTPN12-213ENST00000519553 CEP192Q8TEP8 1941 aa1.27□□□□□ -2.21
PTPN12-213ENST00000519553 KIAA1549LQ6ZVL6 1849 aa1.27□□□□□ -2.21
PTPN12-213ENST00000519553 A0A0G2JMM0 328 aa1.27□□□□□ -2.21
PTPN12-213ENST00000519553 A0A1W2PPB8 328 aa1.27□□□□□ -2.21
PTPN12-213ENST00000519553 KIR3DP1A8MWS1 328 aa1.27□□□□□ -2.21
PTPN12-213ENST00000519553 COX7CP15954 63 aa1.27□□□□□ -2.21
PTPN12-213ENST00000519553 LINC01545Q5VT33 79 aa1.27□□□□□ -2.21
PTPN12-213ENST00000519553 SMIM7Q9BQ49 75 aa1.27□□□□□ -2.21
PTPN12-213ENST00000519553 MYH7P12883 1935 aa1.27□□□□□ -2.21
PTPN12-213ENST00000519553 HELZP42694 1942 aaKnown RBP1.27□□□□□ -2.21
PTPN12-213ENST00000519553 KIDINS220Q9ULH0 1771 aa1.26□□□□□ -2.21
PTPN12-213ENST00000519553 CECR2Q9BXF3 1484 aa1.26□□□□□ -2.21
PTPN12-213ENST00000519553 NAIPQ13075 1403 aa1.26□□□□□ -2.21
PTPN12-213ENST00000519553 TRAV12-2A0A075B6T6 113 aa1.26□□□□□ -2.21
PTPN12-213ENST00000519553 TRAV2A0A0B4J234 112 aa1.26□□□□□ -2.21
PTPN12-213ENST00000519553 FAM25AB3EWG3 89 aa1.26□□□□□ -2.21
PTPN12-213ENST00000519553 FAM25CB3EWG5 89 aa1.26□□□□□ -2.21
PTPN12-213ENST00000519553 FAM25GB3EWG6 89 aa1.26□□□□□ -2.21
PTPN12-213ENST00000519553 NUPR1O60356 82 aa1.26□□□□□ -2.21
PTPN12-213ENST00000519553 EDF1O60869 148 aaKnown RBP1.26□□□□□ -2.21
PTPN12-213ENST00000519553 OCIAD2Q56VL3 154 aa1.26□□□□□ -2.21
PTPN12-213ENST00000519553 TEX261Q6UWH6 196 aa1.26□□□□□ -2.21
PTPN12-213ENST00000519553 Q6ZUT4 128 aa1.26□□□□□ -2.21
PTPN12-213ENST00000519553 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.26□□□□□ -2.21
PTPN12-213ENST00000519553 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.26□□□□□ -2.21
PTPN12-213ENST00000519553 UNC13CQ8NB66 2214 aa1.25□□□□□ -2.21
PTPN12-213ENST00000519553 ATG2AQ2TAZ0 1938 aa1.25□□□□□ -2.21
PTPN12-213ENST00000519553 LOC107984156A0A0G2JMH3 177 aa1.25□□□□□ -2.21
PTPN12-213ENST00000519553 TRBV6-4A0A1B0GX49 114 aa1.25□□□□□ -2.21
PTPN12-213ENST00000519553 F8W1H4 67 aa1.25□□□□□ -2.21
PTPN12-213ENST00000519553 M0R2N4 97 aa1.25□□□□□ -2.21
PTPN12-213ENST00000519553 INE1O15225 51 aa1.25□□□□□ -2.21
PTPN12-213ENST00000519553 FAM74A1Q5RGS3 127 aa1.25□□□□□ -2.21
PTPN12-213ENST00000519553 GKN2Q86XP6 184 aa1.25□□□□□ -2.21
PTPN12-213ENST00000519553 ARL17AQ8IVW1 177 aa1.25□□□□□ -2.21
PTPN12-213ENST00000519553 TCTEX1D1Q8N7M0 179 aa1.25□□□□□ -2.21
PTPN12-213ENST00000519553 REG4Q9BYZ8 158 aa1.25□□□□□ -2.21
PTPN12-213ENST00000519553 TAS2R8Q9NYW2 309 aa1.25□□□□□ -2.21
PTPN12-213ENST00000519553 KLK9Q9UKQ9 250 aa1.25□□□□□ -2.21
PTPN12-213ENST00000519553 ZFP30Q9Y2G7 519 aa1.25□□□□□ -2.21
PTPN12-213ENST00000519553 NINQ8N4C6 2090 aa1.25□□□□□ -2.21
PTPN12-213ENST00000519553 PTPRFP10586 1907 aa1.25□□□□□ -2.21
PTPN12-213ENST00000519553 AKAP11Q9UKA4 1901 aa1.25□□□□□ -2.21
PTPN12-213ENST00000519553 LOC110117498A0A087WWA1 95 aa1.24□□□□□ -2.21
PTPN12-213ENST00000519553 A0A0J9YY99 117 aa1.24□□□□□ -2.21
PTPN12-213ENST00000519553 LOC100130705A0A1B0GUX0 176 aa1.24□□□□□ -2.21
PTPN12-213ENST00000519553 BBIP1A8MTZ0 92 aa1.24□□□□□ -2.21
PTPN12-213ENST00000519553 J3QLW9 94 aa1.24□□□□□ -2.21
PTPN12-213ENST00000519553 M0R129 80 aa1.24□□□□□ -2.21
PTPN12-213ENST00000519553 CORTO00230 105 aa1.24□□□□□ -2.21
PTPN12-213ENST00000519553 IL9P15248 144 aa1.24□□□□□ -2.21
PTPN12-213ENST00000519553 ZNF25P17030 456 aaPredicted RBP1.24□□□□□ -2.21
PTPN12-213ENST00000519553 ADCYAP1P18509 176 aa1.24□□□□□ -2.21
PTPN12-213ENST00000519553 MRPS10P82664 201 aaKnown RBP1.24□□□□□ -2.21
PTPN12-213ENST00000519553 MEIG1Q5JSS6 88 aa1.24□□□□□ -2.21
PTPN12-213ENST00000519553 LINC00299Q6ZSB3 139 aa1.24□□□□□ -2.21
PTPN12-213ENST00000519553 SLC25A26Q70HW3 274 aa1.24□□□□□ -2.21
PTPN12-213ENST00000519553 SNX29P2Q8IUI4 249 aa1.24□□□□□ -2.21
PTPN12-213ENST00000519553 KCNRGQ8N5I3 272 aa1.24□□□□□ -2.21
PTPN12-213ENST00000519553 C5orf17Q8NAS9 161 aa1.24□□□□□ -2.21
PTPN12-213ENST00000519553 VSTM2AQ8TAG5 236 aa1.24□□□□□ -2.21
PTPN12-213ENST00000519553 PP6455Q8WZ26 134 aa1.24□□□□□ -2.21
PTPN12-213ENST00000519553 NOP16Q9Y3C1 178 aaKnown RBP1.24□□□□□ -2.21
PTPN12-213ENST00000519553 MYH9P35579 1960 aaKnown RBP1.24□□□□□ -2.21
PTPN12-213ENST00000519553 KIF13AQ9H1H9 1805 aa1.24□□□□□ -2.21
PTPN12-213ENST00000519553 EML5Q05BV3 1969 aa1.23□□□□□ -2.21
PTPN12-213ENST00000519553 ALPK3Q96L96 1907 aa1.23□□□□□ -2.21
PTPN12-213ENST00000519553 F6UZH7 168 aa1.23□□□□□ -2.21
PTPN12-213ENST00000519553 MPV17LQ2QL34 196 aa1.23□□□□□ -2.21
PTPN12-213ENST00000519553 MIC13Q5XKP0 118 aa1.23□□□□□ -2.21
PTPN12-213ENST00000519553 COPS9Q8WXC6 57 aa1.23□□□□□ -2.21
PTPN12-213ENST00000519553 PSMG3Q9BT73 122 aaPredicted RBP1.23□□□□□ -2.21
PTPN12-213ENST00000519553 RERGLQ9H628 205 aa1.23□□□□□ -2.21
PTPN12-213ENST00000519553 SCN3BQ9NY72 215 aa1.23□□□□□ -2.21
PTPN12-213ENST00000519553 GNG8Q9UK08 70 aa1.23□□□□□ -2.21
PTPN12-213ENST00000519553 A2ML1A8K2U0 1454 aa1.23□□□□□ -2.21
PTPN12-213ENST00000519553 MYO18AQ92614 2054 aaKnown RBP1.22□□□□□ -2.21
PTPN12-213ENST00000519553 SIP14410 1827 aa1.22□□□□□ -2.21
PTPN12-213ENST00000519553 EXPH5Q8NEV8 1989 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms