RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 L7N2F9 121 aa12.31□□□□□ -0.44
HMGCS1-206ENST00000511774 FGF7P21781 194 aa12.31□□□□□ -0.44
HMGCS1-206ENST00000511774 VAMP2P63027 116 aa12.31□□□□□ -0.44
HMGCS1-206ENST00000511774 RHOHQ15669 191 aa12.31□□□□□ -0.44
HMGCS1-206ENST00000511774 Q8N976 141 aa12.31□□□□□ -0.44
HMGCS1-206ENST00000511774 DEDD2Q8WXF8 326 aa12.31□□□□□ -0.44
HMGCS1-206ENST00000511774 PRADC1Q9BSG0 188 aa12.31□□□□□ -0.44
HMGCS1-206ENST00000511774 Q9UF83 564 aa12.31□□□□□ -0.44
HMGCS1-206ENST00000511774 OR51M1Q9H341 326 aa12.3□□□□□ -0.44
HMGCS1-206ENST00000511774 C5orf51A6NDU8 294 aa12.29□□□□□ -0.44
HMGCS1-206ENST00000511774 LINC00694P0DN24 101 aa12.29□□□□□ -0.44
HMGCS1-206ENST00000511774 ASIPP42127 132 aa12.29□□□□□ -0.44
HMGCS1-206ENST00000511774 MITD1Q8WV92 249 aa12.29□□□□□ -0.44
HMGCS1-206ENST00000511774 TVP23CQ96ET8 276 aa12.29□□□□□ -0.44
HMGCS1-206ENST00000511774 BTCP35070 178 aa12.28□□□□□ -0.44
HMGCS1-206ENST00000511774 RANP62826 216 aaKnown RBP12.28□□□□□ -0.44
HMGCS1-206ENST00000511774 ODF1Q14990 250 aa12.28□□□□□ -0.44
HMGCS1-206ENST00000511774 PAXXQ9BUH6 204 aa12.28□□□□□ -0.44
HMGCS1-206ENST00000511774 NPCDR1Q9BY65 106 aa12.28□□□□□ -0.44
HMGCS1-206ENST00000511774 MRPS26Q9BYN8 205 aaKnown RBP12.28□□□□□ -0.44
HMGCS1-206ENST00000511774 LENEPQ9Y5L5 61 aa12.28□□□□□ -0.44
HMGCS1-206ENST00000511774 IGKV2D-24A0A075B6R9 120 aa12.27□□□□□ -0.45
HMGCS1-206ENST00000511774 DIRC3C9JPN6 131 aa12.27□□□□□ -0.45
HMGCS1-206ENST00000511774 F6UZH7 168 aa12.27□□□□□ -0.45
HMGCS1-206ENST00000511774 H3BMQ9 156 aa12.27□□□□□ -0.45
HMGCS1-206ENST00000511774 TMBIM6P55061 237 aa12.27□□□□□ -0.45
HMGCS1-206ENST00000511774 GGTLC3B5MD39 225 aa12.26□□□□□ -0.45
HMGCS1-206ENST00000511774 SULT1A1P50225 295 aa12.26□□□□□ -0.45
HMGCS1-206ENST00000511774 ZNF876PQ49A33 203 aa12.26□□□□□ -0.45
HMGCS1-206ENST00000511774 TMEM252Q8N6L7 170 aa12.26□□□□□ -0.45
HMGCS1-206ENST00000511774 C11orf21Q9P2W6 132 aa12.26□□□□□ -0.45
HMGCS1-206ENST00000511774 PANO1I0J062 215 aa12.25□□□□□ -0.45
HMGCS1-206ENST00000511774 S100A11P31949 105 aa12.25□□□□□ -0.45
HMGCS1-206ENST00000511774 CSN1S1P47710 185 aa12.25□□□□□ -0.45
HMGCS1-206ENST00000511774 LYRM2Q9NU23 88 aaPredicted RBP12.25□□□□□ -0.45
HMGCS1-206ENST00000511774 COX11Q9Y6N1 276 aa12.25□□□□□ -0.45
HMGCS1-206ENST00000511774 GAGE12JA6NER3 117 aa12.24□□□□□ -0.45
HMGCS1-206ENST00000511774 PGPEP1LA6NFU8 196 aa12.24□□□□□ -0.45
HMGCS1-206ENST00000511774 GAGE1Q13065 139 aa12.24□□□□□ -0.45
HMGCS1-206ENST00000511774 GAGE4Q13068 117 aa12.24□□□□□ -0.45
HMGCS1-206ENST00000511774 GAGE5Q13069 117 aa12.24□□□□□ -0.45
HMGCS1-206ENST00000511774 GAGE13Q4V321 117 aa12.24□□□□□ -0.45
HMGCS1-206ENST00000511774 TOR2AQ5JU69 321 aa12.24□□□□□ -0.45
HMGCS1-206ENST00000511774 THAP6Q8TBB0 222 aa12.24□□□□□ -0.45
HMGCS1-206ENST00000511774 BCL7BQ9BQE9 202 aa12.24□□□□□ -0.45
HMGCS1-206ENST00000511774 SDF2L1Q9HCN8 221 aa12.24□□□□□ -0.45
HMGCS1-206ENST00000511774 RPH3ALQ9UNE2 315 aa12.24□□□□□ -0.45
HMGCS1-206ENST00000511774 TRAV21A0A0B4J279 112 aa12.23□□□□□ -0.45
HMGCS1-206ENST00000511774 ZNF506Q5JVG8 444 aa12.23□□□□□ -0.45
HMGCS1-206ENST00000511774 KLK12Q9UKR0 248 aa12.23□□□□□ -0.45
HMGCS1-206ENST00000511774 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.23□□□□□ -0.45
HMGCS1-206ENST00000511774 TRAV8-1A0A0A6YYK1 113 aa12.22□□□□□ -0.45
HMGCS1-206ENST00000511774 FAM25EA8MYX2 175 aa12.22□□□□□ -0.45
HMGCS1-206ENST00000511774 TMED6Q8WW62 240 aa12.22□□□□□ -0.45
HMGCS1-206ENST00000511774 ASB13Q8WXK3 278 aa12.22□□□□□ -0.45
HMGCS1-206ENST00000511774 HYLS1Q96M11 299 aa12.22□□□□□ -0.45
HMGCS1-206ENST00000511774 C9orf85Q96MD7 179 aa12.22□□□□□ -0.45
HMGCS1-206ENST00000511774 OR7C2O60412 319 aa12.21□□□□□ -0.45
HMGCS1-206ENST00000511774 EIF3GO75821 320 aaKnown RBP eCLIP12.21□□□□□ -0.45
HMGCS1-206ENST00000511774 MGST1P10620 155 aaKnown RBP12.21□□□□□ -0.45
HMGCS1-206ENST00000511774 INPP1P49441 399 aa12.21□□□□□ -0.45
HMGCS1-206ENST00000511774 IL15RAQ13261 267 aa12.21□□□□□ -0.45
HMGCS1-206ENST00000511774 Q6ZRU5 148 aa12.21□□□□□ -0.45
HMGCS1-206ENST00000511774 NIT1Q86X76 327 aa12.21□□□□□ -0.45
HMGCS1-206ENST00000511774 RMI2Q96E14 147 aa12.21□□□□□ -0.45
HMGCS1-206ENST00000511774 SAMD10Q9BYL1 202 aa12.21□□□□□ -0.45
HMGCS1-206ENST00000511774 NAP1L6A6NFF2 107 aa12.2□□□□□ -0.46
HMGCS1-206ENST00000511774 CIDEAO60543 219 aa12.2□□□□□ -0.46
HMGCS1-206ENST00000511774 ZNF80P51504 273 aaPredicted RBP12.2□□□□□ -0.46
HMGCS1-206ENST00000511774 SPANXN2Q5MJ10 180 aa12.2□□□□□ -0.46
HMGCS1-206ENST00000511774 ATRAIDQ6UW56 229 aa12.2□□□□□ -0.46
HMGCS1-206ENST00000511774 UBE2WQ96B02 151 aa12.2□□□□□ -0.46
HMGCS1-206ENST00000511774 S100A10P60903 97 aa12.19□□□□□ -0.46
HMGCS1-206ENST00000511774 UBE2L3P68036 154 aaKnown RBP12.19□□□□□ -0.46
HMGCS1-206ENST00000511774 HBG1P69891 147 aa12.19□□□□□ -0.46
HMGCS1-206ENST00000511774 HBG2P69892 147 aa12.19□□□□□ -0.46
HMGCS1-206ENST00000511774 NHLH2Q02577 135 aa12.19□□□□□ -0.46
HMGCS1-206ENST00000511774 RAB32Q13637 225 aa12.19□□□□□ -0.46
HMGCS1-206ENST00000511774 ATP6V1FQ16864 119 aa12.19□□□□□ -0.46
HMGCS1-206ENST00000511774 GOLT1AQ6ZVE7 132 aa12.19□□□□□ -0.46
HMGCS1-206ENST00000511774 STX12Q86Y82 276 aa12.19□□□□□ -0.46
HMGCS1-206ENST00000511774 CYB561D1Q8N8Q1 229 aa12.19□□□□□ -0.46
HMGCS1-206ENST00000511774 TMEM75Q8N9X5 138 aa12.19□□□□□ -0.46
HMGCS1-206ENST00000511774 KCNS1Q96KK3 526 aa12.19□□□□□ -0.46
HMGCS1-206ENST00000511774 C14orf178Q8N769 122 aaPredicted RBP12.18□□□□□ -0.46
HMGCS1-206ENST00000511774 C2orf50Q96LR7 162 aa12.18□□□□□ -0.46
HMGCS1-206ENST00000511774 SDHCQ99643 169 aaPredicted RBP12.18□□□□□ -0.46
HMGCS1-206ENST00000511774 ATP5SQ99766 215 aa12.18□□□□□ -0.46
HMGCS1-206ENST00000511774 PARLQ9H300 379 aa12.18□□□□□ -0.46
HMGCS1-206ENST00000511774 TREM1Q9NP99 234 aa12.18□□□□□ -0.46
HMGCS1-206ENST00000511774 RNASE3P12724 160 aaKnown RBP12.17□□□□□ -0.46
HMGCS1-206ENST00000511774 OR2T35Q8NGX2 323 aa12.17□□□□□ -0.46
HMGCS1-206ENST00000511774 LINC00479Q96M42 142 aa12.17□□□□□ -0.46
HMGCS1-206ENST00000511774 SEC22CQ9BRL7 303 aa12.17□□□□□ -0.46
HMGCS1-206ENST00000511774 JPT2Q9H910 190 aa12.17□□□□□ -0.46
HMGCS1-206ENST00000511774 PGPA6NDG6 321 aa12.16□□□□□ -0.46
HMGCS1-206ENST00000511774 PVALBP20472 110 aaPredicted RBP12.16□□□□□ -0.46
HMGCS1-206ENST00000511774 GNG5P63218 68 aa12.16□□□□□ -0.46
HMGCS1-206ENST00000511774 UFSP1Q6NVU6 142 aa12.16□□□□□ -0.46
HMGCS1-206ENST00000511774 PTH2Q96A98 100 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms