RNA–Protein interactions for RNA: ENST00000509774.5

PTPN20-222, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 788 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-222	ENST00000509774	C11orf94	C9JXX5	98 aa		7.36	□□□□□ -1.23
PTPN20-222	ENST00000509774	PDE6D	O43924	150 aa		7.36	□□□□□ -1.23
PTPN20-222	ENST00000509774	NDUFS6	O75380	124 aa	Known RBP	7.36	□□□□□ -1.23
PTPN20-222	ENST00000509774	IGLV2-11	P01706	119 aa		7.36	□□□□□ -1.23
PTPN20-222	ENST00000509774	RBMY1A1	P0DJD3	496 aa	Known RBP	7.36	□□□□□ -1.23
PTPN20-222	ENST00000509774	RBMY1C	P0DJD4	496 aa		7.36	□□□□□ -1.23
PTPN20-222	ENST00000509774	RNASE4	P34096	147 aa	Known RBP	7.36	□□□□□ -1.23
PTPN20-222	ENST00000509774	GNG5	P63218	68 aa		7.36	□□□□□ -1.23
PTPN20-222	ENST00000509774	CCL20	P78556	96 aa		7.36	□□□□□ -1.23
PTPN20-222	ENST00000509774	RBMY1F	Q15415	496 aa	Known RBP	7.36	□□□□□ -1.23
PTPN20-222	ENST00000509774	ANXA2R	Q3ZCQ2	193 aa		7.36	□□□□□ -1.23
PTPN20-222	ENST00000509774	CEMP1	Q6PRD7	247 aa	Predicted RBP	7.36	□□□□□ -1.23
PTPN20-222	ENST00000509774	LINC00336	Q6ZUF6	198 aa		7.36	□□□□□ -1.23
PTPN20-222	ENST00000509774	COX8C	Q7Z4L0	72 aa		7.36	□□□□□ -1.23
PTPN20-222	ENST00000509774	C16orf74	Q96GX8	76 aa		7.36	□□□□□ -1.23
PTPN20-222	ENST00000509774	GNG13	Q9P2W3	67 aa		7.36	□□□□□ -1.23
PTPN20-222	ENST00000509774	TRAV8-1	A0A0A6YYK1	113 aa		7.35	□□□□□ -1.23
PTPN20-222	ENST00000509774	TRAV21	A0A0B4J279	112 aa		7.35	□□□□□ -1.23
PTPN20-222	ENST00000509774	SPART-AS1	P0CW21	52 aa		7.35	□□□□□ -1.23
PTPN20-222	ENST00000509774	PRB4	P10163	310 aa	Predicted RBP	7.35	□□□□□ -1.23
PTPN20-222	ENST00000509774	UBE2G1	P62253	170 aa		7.35	□□□□□ -1.23
PTPN20-222	ENST00000509774	MEF2B	Q02080	365 aa	Predicted RBP	7.35	□□□□□ -1.23
PTPN20-222	ENST00000509774	TMEM183B	Q1AE95	376 aa		7.35	□□□□□ -1.23
PTPN20-222	ENST00000509774	SMUG1	Q53HV7	270 aa		7.35	□□□□□ -1.23
PTPN20-222	ENST00000509774	ZNF680	Q8NEM1	530 aa		7.35	□□□□□ -1.23
PTPN20-222	ENST00000509774	C11orf45	Q8TAV5	145 aa		7.35	□□□□□ -1.23
PTPN20-222	ENST00000509774	TMEM263	Q8WUH6	116 aa	Known RBP	7.35	□□□□□ -1.23
PTPN20-222	ENST00000509774	VAX2	Q9UIW0	290 aa		7.35	□□□□□ -1.23
PTPN20-222	ENST00000509774	LOC102723971	A0A1B0GUV8	181 aa		7.34	□□□□□ -1.23
PTPN20-222	ENST00000509774		A0A1B0GV50	99 aa		7.34	□□□□□ -1.23
PTPN20-222	ENST00000509774	LYRM9	A8MSI8	78 aa		7.34	□□□□□ -1.23
PTPN20-222	ENST00000509774	BCL2	P10415	239 aa		7.34	□□□□□ -1.23
PTPN20-222	ENST00000509774	ATP5G3	P48201	142 aa		7.34	□□□□□ -1.23
PTPN20-222	ENST00000509774	KIR3DS1	Q14943	382 aa		7.34	□□□□□ -1.23
PTPN20-222	ENST00000509774	TDRG1	Q3Y452	100 aa		7.34	□□□□□ -1.23
PTPN20-222	ENST00000509774	PRNT	Q86SH4	94 aa		7.34	□□□□□ -1.23
PTPN20-222	ENST00000509774	EIF4E3	Q8N5X7	224 aa	Known RBP	7.34	□□□□□ -1.23
PTPN20-222	ENST00000509774		Q8TAT8	98 aa		7.34	□□□□□ -1.23
PTPN20-222	ENST00000509774	C2CD4C	Q8TF44	421 aa		7.34	□□□□□ -1.23
PTPN20-222	ENST00000509774	C11orf52	Q96A22	123 aa		7.34	□□□□□ -1.23
PTPN20-222	ENST00000509774	TVP23C	Q96ET8	276 aa		7.34	□□□□□ -1.23
PTPN20-222	ENST00000509774	KCNS1	Q96KK3	526 aa		7.34	□□□□□ -1.23
PTPN20-222	ENST00000509774	TP53TG3	Q9ULZ0	132 aa		7.34	□□□□□ -1.23
PTPN20-222	ENST00000509774	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	7.34	□□□□□ -1.23
PTPN20-222	ENST00000509774	IGHV1OR15-1	A0A075B7D0	117 aa		7.33	□□□□□ -1.24
PTPN20-222	ENST00000509774	FABP5P3	A8MUU1	101 aa		7.33	□□□□□ -1.24
PTPN20-222	ENST00000509774	ZNF705G	A8MUZ8	300 aa	Predicted RBP	7.33	□□□□□ -1.24
PTPN20-222	ENST00000509774		J3KRW8	73 aa		7.33	□□□□□ -1.24
PTPN20-222	ENST00000509774	RGS13	O14921	159 aa		7.33	□□□□□ -1.24
PTPN20-222	ENST00000509774	PFN1	P07737	140 aa	Known RBP	7.33	□□□□□ -1.24
PTPN20-222	ENST00000509774	AKR1C3	P42330	323 aa		7.33	□□□□□ -1.24
PTPN20-222	ENST00000509774	BTN1A1	Q13410	526 aa		7.33	□□□□□ -1.24
PTPN20-222	ENST00000509774	IBA57	Q5T440	356 aa	Known RBP	7.33	□□□□□ -1.24
PTPN20-222	ENST00000509774	FAM159A	Q6UWV7	190 aa		7.33	□□□□□ -1.24
PTPN20-222	ENST00000509774	MAPKAPK5-AS1	Q8N8E1	139 aa		7.33	□□□□□ -1.24
PTPN20-222	ENST00000509774	RNASE8	Q8TDE3	154 aa	Known RBP	7.33	□□□□□ -1.24
PTPN20-222	ENST00000509774	LINC00479	Q96M42	142 aa		7.33	□□□□□ -1.24
PTPN20-222	ENST00000509774	TRAV34	A0A0B4J273	112 aa		7.32	□□□□□ -1.24
PTPN20-222	ENST00000509774	RBFOX3	A6NFN3	312 aa		7.32	□□□□□ -1.24
PTPN20-222	ENST00000509774	LTA	P01374	205 aa		7.32	□□□□□ -1.24
PTPN20-222	ENST00000509774	HTN1	P15515	57 aa		7.32	□□□□□ -1.24
PTPN20-222	ENST00000509774	AZU1	P20160	251 aa		7.32	□□□□□ -1.24
PTPN20-222	ENST00000509774	SRSF3	P84103	164 aa	Known RBP	7.32	□□□□□ -1.24
PTPN20-222	ENST00000509774	DAZ2	Q13117	558 aa	Known RBP	7.32	□□□□□ -1.24
PTPN20-222	ENST00000509774	PRR9	Q5T870	116 aa		7.32	□□□□□ -1.24
PTPN20-222	ENST00000509774	ZNF575	Q86XF7	245 aa		7.32	□□□□□ -1.24
PTPN20-222	ENST00000509774	TMEM183A	Q8IXX5	376 aa		7.32	□□□□□ -1.24
PTPN20-222	ENST00000509774	SMIM12	Q96EX1	92 aa		7.32	□□□□□ -1.24
PTPN20-222	ENST00000509774	SGK494	Q96LW2	274 aa		7.32	□□□□□ -1.24
PTPN20-222	ENST00000509774	DKK2	Q9UBU2	259 aa		7.32	□□□□□ -1.24
PTPN20-222	ENST00000509774	TRGV11	A0A075B6L2	103 aa		7.31	□□□□□ -1.24
PTPN20-222	ENST00000509774	CBY3	A6NI87	242 aa		7.31	□□□□□ -1.24
PTPN20-222	ENST00000509774	SNURFL	B1AK76	121 aa		7.31	□□□□□ -1.24
PTPN20-222	ENST00000509774	TMEM250	H0YL14	139 aa		7.31	□□□□□ -1.24
PTPN20-222	ENST00000509774	DEFB4A	O15263	64 aa		7.31	□□□□□ -1.24
PTPN20-222	ENST00000509774	GCG	P01275	180 aa		7.31	□□□□□ -1.24
PTPN20-222	ENST00000509774		Q86TA4	180 aa		7.31	□□□□□ -1.24
PTPN20-222	ENST00000509774	SPX	Q9BT56	116 aa		7.31	□□□□□ -1.24
PTPN20-222	ENST00000509774	MLST8	Q9BVC4	326 aa		7.31	□□□□□ -1.24
PTPN20-222	ENST00000509774	SMDT1	Q9H4I9	107 aa		7.31	□□□□□ -1.24
PTPN20-222	ENST00000509774	KLK5	Q9Y337	293 aa	Predicted RBP	7.31	□□□□□ -1.24
PTPN20-222	ENST00000509774	PLAC8L1	A1L4L8	177 aa		7.3	□□□□□ -1.24
PTPN20-222	ENST00000509774	RPL35	P42766	123 aa	Known RBP	7.3	□□□□□ -1.24
PTPN20-222	ENST00000509774	EMP1	P54849	157 aa		7.3	□□□□□ -1.24
PTPN20-222	ENST00000509774	ZNF674	Q2M3X9	581 aa		7.3	□□□□□ -1.24
PTPN20-222	ENST00000509774	LGALS9B	Q3B8N2	356 aa		7.3	□□□□□ -1.24
PTPN20-222	ENST00000509774	ZNF506	Q5JVG8	444 aa		7.3	□□□□□ -1.24
PTPN20-222	ENST00000509774	FAM162B	Q5T6X4	162 aa		7.3	□□□□□ -1.24
PTPN20-222	ENST00000509774	FAM222A	Q5U5X8	452 aa		7.3	□□□□□ -1.24
PTPN20-222	ENST00000509774	BAGE2	Q86Y30	109 aa		7.3	□□□□□ -1.24
PTPN20-222	ENST00000509774	FAM210A	Q96ND0	272 aa		7.3	□□□□□ -1.24
PTPN20-222	ENST00000509774	C8orf49	Q96NF6	230 aa		7.3	□□□□□ -1.24
PTPN20-222	ENST00000509774	SDF2L1	Q9HCN8	221 aa		7.3	□□□□□ -1.24
PTPN20-222	ENST00000509774	BIN3	Q9NQY0	253 aa		7.3	□□□□□ -1.24
PTPN20-222	ENST00000509774	MED9	Q9NWA0	146 aa		7.3	□□□□□ -1.24
PTPN20-222	ENST00000509774	PRSS29P	A6NIE9	313 aa		7.29	□□□□□ -1.24
PTPN20-222	ENST00000509774	PRM2	P04554	102 aa		7.29	□□□□□ -1.24
PTPN20-222	ENST00000509774	TCL1A	P56279	114 aa		7.29	□□□□□ -1.24
PTPN20-222	ENST00000509774	TCTA	P57738	103 aa		7.29	□□□□□ -1.24
PTPN20-222	ENST00000509774	RAB14	P61106	215 aa		7.29	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms