RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.29□□□□□ -2.36
LSM6-205ENST00000507449 SPTBP11277 2137 aa0.29□□□□□ -2.36
LSM6-205ENST00000507449 OVOS2A0A0G2JMS6 1433 aa0.29□□□□□ -2.36
LSM6-205ENST00000507449 A0A0G2JMM0 328 aa0.28□□□□□ -2.36
LSM6-205ENST00000507449 HIGD1CA8MV81 97 aa0.28□□□□□ -2.36
LSM6-205ENST00000507449 LSM3P62310 102 aaKnown RBP0.28□□□□□ -2.36
LSM6-205ENST00000507449 OR8B8Q15620 311 aa0.28□□□□□ -2.36
LSM6-205ENST00000507449 IQCJQ1A5X6 159 aa0.28□□□□□ -2.36
LSM6-205ENST00000507449 IDO2Q6ZQW0 420 aa0.28□□□□□ -2.36
LSM6-205ENST00000507449 DMAC1Q96GE9 116 aa0.28□□□□□ -2.36
LSM6-205ENST00000507449 MRPL40Q9NQ50 206 aaKnown RBP0.28□□□□□ -2.36
LSM6-205ENST00000507449 CPDO75976 1380 aa0.28□□□□□ -2.36
LSM6-205ENST00000507449 PTPRGP23470 1445 aa0.28□□□□□ -2.37
LSM6-205ENST00000507449 KCPQ6ZWJ8 1503 aa0.28□□□□□ -2.37
LSM6-205ENST00000507449 LOC285556D6RIA3 1793 aa0.27□□□□□ -2.37
LSM6-205ENST00000507449 TRAV36DV7A0A075B6V5 113 aa0.27□□□□□ -2.37
LSM6-205ENST00000507449 A0A1B0GW64 132 aa0.27□□□□□ -2.37
LSM6-205ENST00000507449 A0A1B0GX51 115 aa0.27□□□□□ -2.37
LSM6-205ENST00000507449 CD3DP04234 171 aa0.27□□□□□ -2.37
LSM6-205ENST00000507449 ADCYAP1P18509 176 aa0.27□□□□□ -2.37
LSM6-205ENST00000507449 PCBD1P61457 104 aa0.27□□□□□ -2.37
LSM6-205ENST00000507449 SPINK13Q1W4C9 94 aa0.27□□□□□ -2.37
LSM6-205ENST00000507449 OR8I2Q8N0Y5 310 aa0.27□□□□□ -2.37
LSM6-205ENST00000507449 OR4S1Q8NGB4 309 aa0.27□□□□□ -2.37
LSM6-205ENST00000507449 METTL1Q9UBP6 276 aaKnown RBP0.27□□□□□ -2.37
LSM6-205ENST00000507449 ARHGAP31Q2M1Z3 1444 aa0.27□□□□□ -2.37
LSM6-205ENST00000507449 ARAP1Q96P48 1450 aa0.27□□□□□ -2.37
LSM6-205ENST00000507449 USP24Q9UPU5 2620 aa0.27□□□□□ -2.37
LSM6-205ENST00000507449 DPM2O94777 84 aa0.26□□□□□ -2.37
LSM6-205ENST00000507449 TNFSF15O95150 251 aa0.26□□□□□ -2.37
LSM6-205ENST00000507449 HSD17B12Q53GQ0 312 aa0.26□□□□□ -2.37
LSM6-205ENST00000507449 TMEM244Q5VVB8 128 aa0.26□□□□□ -2.37
LSM6-205ENST00000507449 TAC4Q86UU9 113 aa0.26□□□□□ -2.37
LSM6-205ENST00000507449 ATG5Q9H1Y0 275 aa0.26□□□□□ -2.37
LSM6-205ENST00000507449 HSPB11Q9Y547 144 aa0.26□□□□□ -2.37
LSM6-205ENST00000507449 DNAJC15Q9Y5T4 150 aa0.26□□□□□ -2.37
LSM6-205ENST00000507449 ZCCHC6Q5VYS8 1495 aaKnown RBP0.26□□□□□ -2.37
LSM6-205ENST00000507449 FXYD1O00168 92 aa0.25□□□□□ -2.37
LSM6-205ENST00000507449 DEGS1O15121 323 aa0.25□□□□□ -2.37
LSM6-205ENST00000507449 CCKP06307 115 aa0.25□□□□□ -2.37
LSM6-205ENST00000507449 PAEPP09466 180 aa0.25□□□□□ -2.37
LSM6-205ENST00000507449 PSPHP78330 225 aa0.25□□□□□ -2.37
LSM6-205ENST00000507449 TMEM91Q6ZNR0 172 aa0.25□□□□□ -2.37
LSM6-205ENST00000507449 KMT2DO14686 5537 aa0.25□□□□□ -2.37
LSM6-205ENST00000507449 LRP5O75197 1615 aa0.24□□□□□ -2.37
LSM6-205ENST00000507449 KNTC1P50748 2209 aa0.24□□□□□ -2.37
LSM6-205ENST00000507449 PNMA8CA0A1B0GUJ8 204 aa0.24□□□□□ -2.37
LSM6-205ENST00000507449 C9JAW5 83 aa0.24□□□□□ -2.37
LSM6-205ENST00000507449 TFF1P04155 84 aa0.24□□□□□ -2.37
LSM6-205ENST00000507449 HIGD1AQ9Y241 93 aa0.24□□□□□ -2.37
LSM6-205ENST00000507449 SYNE1Q8NF91 8797 aaKnown RBP0.24□□□□□ -2.37
LSM6-205ENST00000507449 KIDINS220Q9ULH0 1771 aa0.24□□□□□ -2.37
LSM6-205ENST00000507449 FAT4Q6V0I7 4981 aa0.23□□□□□ -2.37
LSM6-205ENST00000507449 TRPM7Q96QT4 1865 aa0.23□□□□□ -2.37
LSM6-205ENST00000507449 A0A096LNT2 108 aa0.23□□□□□ -2.37
LSM6-205ENST00000507449 CXorf51AA0A1B0GTR3 108 aa0.23□□□□□ -2.37
LSM6-205ENST00000507449 SCTP09683 121 aa0.23□□□□□ -2.37
LSM6-205ENST00000507449 HIST1H1BP16401 226 aaKnown RBP0.23□□□□□ -2.37
LSM6-205ENST00000507449 KLKP1Q107X0 134 aa0.23□□□□□ -2.37
LSM6-205ENST00000507449 BDP1A6H8Y1 2624 aa0.23□□□□□ -2.37
LSM6-205ENST00000507449 CDK12Q9NYV4 1490 aaPredicted RBP0.22□□□□□ -2.37
LSM6-205ENST00000507449 POLR2JP52435 117 aaKnown RBP0.22□□□□□ -2.37
LSM6-205ENST00000507449 UNQ5815/PRO19632Q6UWF5 114 aa0.22□□□□□ -2.37
LSM6-205ENST00000507449 SLC35B3Q9H1N7 401 aa0.22□□□□□ -2.37
LSM6-205ENST00000507449 BANF2Q9H503 90 aa0.22□□□□□ -2.37
LSM6-205ENST00000507449 CALML5Q9NZT1 146 aa0.22□□□□□ -2.37
LSM6-205ENST00000507449 XIRP1Q702N8 1843 aaKnown RBP0.22□□□□□ -2.37
LSM6-205ENST00000507449 BCORL1Q5H9F3 1711 aa0.21□□□□□ -2.38
LSM6-205ENST00000507449 TRAV17A0A0B4J275 112 aa0.21□□□□□ -2.38
LSM6-205ENST00000507449 TRBV10-1A0A0K0K1A3 114 aa0.21□□□□□ -2.38
LSM6-205ENST00000507449 HLA-DRB4P13762 266 aa0.21□□□□□ -2.38
LSM6-205ENST00000507449 CMPK1P30085 196 aa0.21□□□□□ -2.38
LSM6-205ENST00000507449 AKR1D1P51857 326 aa0.21□□□□□ -2.38
LSM6-205ENST00000507449 PLGLB1Q02325 96 aa0.21□□□□□ -2.38
LSM6-205ENST00000507449 SLC25A26Q70HW3 274 aa0.21□□□□□ -2.38
LSM6-205ENST00000507449 TCTE3Q8IZS6 198 aa0.21□□□□□ -2.38
LSM6-205ENST00000507449 TSKUQ8WUA8 353 aa0.21□□□□□ -2.38
LSM6-205ENST00000507449 TMEM14BQ9NUH8 114 aa0.21□□□□□ -2.38
LSM6-205ENST00000507449 HLA-DRB4X5D2U9 266 aa0.21□□□□□ -2.38
LSM6-205ENST00000507449 KDM5CP41229 1560 aa0.2□□□□□ -2.38
LSM6-205ENST00000507449 OR2H2O95918 312 aa0.2□□□□□ -2.38
LSM6-205ENST00000507449 MYH1P12882 1939 aa0.2□□□□□ -2.38
LSM6-205ENST00000507449 BLMP54132 1417 aaPredicted RBP0.2□□□□□ -2.38
LSM6-205ENST00000507449 TNCP24821 2201 aa0.19□□□□□ -2.38
LSM6-205ENST00000507449 RREB1Q92766 1687 aa0.19□□□□□ -2.38
LSM6-205ENST00000507449 SMIM24O75264 130 aa0.19□□□□□ -2.38
LSM6-205ENST00000507449 MPC1LP0DKB6 136 aa0.19□□□□□ -2.38
LSM6-205ENST00000507449 GPR98Q8WXG9 6306 aa0.19□□□□□ -2.38
LSM6-205ENST00000507449 ANK2Q01484 3957 aa0.19□□□□□ -2.38
LSM6-205ENST00000507449 ANKRD30AQ9BXX3 1397 aa0.19□□□□□ -2.38
LSM6-205ENST00000507449 DR1Q01658 176 aa0.18□□□□□ -2.38
LSM6-205ENST00000507449 CCDC153Q494R4 210 aa0.18□□□□□ -2.38
LSM6-205ENST00000507449 PPDPFLQ8WWR9 84 aa0.18□□□□□ -2.38
LSM6-205ENST00000507449 LSM2Q9Y333 95 aaKnown RBP0.18□□□□□ -2.38
LSM6-205ENST00000507449 DLEC1Q9Y238 1755 aa0.17□□□□□ -2.38
LSM6-205ENST00000507449 HELZP42694 1942 aaKnown RBP0.17□□□□□ -2.38
LSM6-205ENST00000507449 ATG2AQ2TAZ0 1938 aa0.17□□□□□ -2.38
LSM6-205ENST00000507449 NINQ8N4C6 2090 aa0.17□□□□□ -2.38
LSM6-205ENST00000507449 BORCS7-ASMTA0A0B4J1R7 106 aa0.17□□□□□ -2.38
LSM6-205ENST00000507449 PYYP10082 97 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms