RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 ZNF331Q9NQX6 463 aaPredicted RBP2.07□□□□□ -2.08
TCOF1-208ENST00000506063 TMEM14CQ9P0S9 112 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 RPH3ALQ9UNE2 315 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 FUT9Q9Y231 359 aa2.07□□□□□ -2.08
TCOF1-208ENST00000506063 TIMM8BQ9Y5J9 83 aaPredicted RBP2.07□□□□□ -2.08
TCOF1-208ENST00000506063 TRBV19A0A075B6N1 114 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 SERTM2A0A1B0GWG4 89 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 RBFOX3A6NFN3 312 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 SNURFLB1AK76 121 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 H3BTX0 84 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 H7BYZ3 331 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 J3KRW8 73 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 TAAR5O14804 337 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 PHOX2AO14813 284 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 ARPC5O15511 151 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 OR10J4P0C629 311 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 PYYP10082 97 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 HTN1P15515 57 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 PPT1P50897 306 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 TAS2R60P59551 318 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 EIF5AP63241 154 aaKnown RBP2.06□□□□□ -2.08
TCOF1-208ENST00000506063 NHLH2Q02577 135 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 ZNF415Q09FC8 603 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 ZNF345Q14585 488 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 PSG3Q16557 428 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 LINC01556Q5JQF7 62 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 IGFL4Q6B9Z1 124 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 FAM122CQ6P4D5 195 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 TMEM182Q6ZP80 229 aaPredicted RBP2.06□□□□□ -2.08
TCOF1-208ENST00000506063 MIR17HGQ75NE6 70 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 OR2G3Q8NGZ4 309 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 TMEM263Q8WUH6 116 aaKnown RBP2.06□□□□□ -2.08
TCOF1-208ENST00000506063 CHAC2Q8WUX2 184 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 BAALCQ8WXS3 180 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 PHYHIPLQ96FC7 376 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 C20orf173Q96LM9 149 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 LINC01587Q99440 93 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 SLC25A2Q9BXI2 301 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 OR51M1Q9H341 326 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 SDF2L1Q9HCN8 221 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 TMEM167BQ9NRX6 74 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 MUC12Q9UKN1 5478 aa2.06□□□□□ -2.08
TCOF1-208ENST00000506063 TRGV11A0A075B6L2 103 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 TRAV12-2A0A075B6T6 113 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 IGKV2-40A0A087WW87 121 aaPredicted RBP2.05□□□□□ -2.08
TCOF1-208ENST00000506063 TRAV8-2A0A0B4J237 113 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 CTXND1A0A1B0GTU2 59 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 GAGE12BA1L429 117 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 C7orf71A4D174 169 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 MAP1LC3B2A6NCE7 125 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 FBLL1A6NHQ2 334 aaKnown RBP2.05□□□□□ -2.08
TCOF1-208ENST00000506063 H0YIZ8 118 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 TEX46H3BTG2 121 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 M0R3E3 92 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 RGS13O14921 159 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 MRPS12O15235 138 aaKnown RBP2.05□□□□□ -2.08
TCOF1-208ENST00000506063 ZNF324O75467 553 aaPredicted RBP2.05□□□□□ -2.08
TCOF1-208ENST00000506063 GAGE7O76087 117 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 CXorf1O96002 111 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 IGKV2D-40P01614 121 aaPredicted RBP2.05□□□□□ -2.08
TCOF1-208ENST00000506063 SLC25A5P05141 298 aaKnown RBP2.05□□□□□ -2.08
TCOF1-208ENST00000506063 GPX1P07203 203 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 SNRPCP09234 159 aaKnown RBP2.05□□□□□ -2.08
TCOF1-208ENST00000506063 NBEAP1P0C6P0 100 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 CFC1BP0CG36 223 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 GAGE12FP0CL80 117 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 GAGE12GP0CL81 117 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 GAGE12IP0CL82 117 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 ARL14EPLP0DKL9 152 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 CT45A10P0DMU9 189 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 ATP6V0CP27449 155 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 RAB2AP61019 212 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 CNBPP62633 177 aaKnown RBP2.05□□□□□ -2.08
TCOF1-208ENST00000506063 SERF2P84101 59 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 IL15RAQ13261 267 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 GCSAMLQ5JQS6 135 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 GFI1BQ5VTD9 330 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 DMRTA1Q5VZB9 504 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 EIF5AL1Q6IS14 154 aaKnown RBP2.05□□□□□ -2.08
TCOF1-208ENST00000506063 REG3GQ6UW15 175 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 SPINK6Q6UWN8 80 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 PATE2Q6UY27 113 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 ZNF493Q6ZR52 646 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 EXOC3-AS1Q8N2X6 119 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 C5orf17Q8NAS9 161 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 OR10G4Q8NGN3 311 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 OR10G9Q8NGN4 311 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 OR10G7Q8NGN6 311 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 Q8TAT8 98 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 STOML3Q8TAV4 291 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 PCNPQ8WW12 178 aaKnown RBP2.05□□□□□ -2.08
TCOF1-208ENST00000506063 HYLS1Q96M11 299 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 PYGO2Q9BRQ0 406 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 ZNF471Q9BX82 626 aaPredicted RBP2.05□□□□□ -2.08
TCOF1-208ENST00000506063 ACTR3CQ9C0K3 210 aaPredicted RBP2.05□□□□□ -2.08
TCOF1-208ENST00000506063 MAP1LC3BQ9GZQ8 125 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 OTORQ9NRC9 128 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 NAGKQ9UJ70 344 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 TNFSF18Q9UNG2 199 aa2.05□□□□□ -2.08
TCOF1-208ENST00000506063 ICOSQ9Y6W8 199 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms