RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 LEPROTO15243 131 aa7.48□□□□□ -1.21
GARNL3-216ENST00000481242 COX8AP10176 69 aa7.48□□□□□ -1.21
GARNL3-216ENST00000481242 Q71RC1 249 aaPredicted RBP7.48□□□□□ -1.21
GARNL3-216ENST00000481242 WIPF3A6NGB9 483 aa7.48□□□□□ -1.21
GARNL3-216ENST00000481242 TPSG1Q9NRR2 321 aa7.48□□□□□ -1.21
GARNL3-216ENST00000481242 NCOR2Q9Y618 2525 aa7.48□□□□□ -1.21
GARNL3-216ENST00000481242 A0A087X0K7 114 aa7.48□□□□□ -1.21
GARNL3-216ENST00000481242 A0A1W2PNU3 283 aaPredicted RBP7.48□□□□□ -1.21
GARNL3-216ENST00000481242 C11orf52Q96A22 123 aa7.48□□□□□ -1.21
GARNL3-216ENST00000481242 PRR20EP86478 221 aa7.47□□□□□ -1.21
GARNL3-216ENST00000481242 PRR20CP86479 221 aa7.47□□□□□ -1.21
GARNL3-216ENST00000481242 PRR20DP86480 221 aa7.47□□□□□ -1.21
GARNL3-216ENST00000481242 PRR20BP86481 221 aa7.47□□□□□ -1.21
GARNL3-216ENST00000481242 PRR20AP86496 221 aa7.47□□□□□ -1.21
GARNL3-216ENST00000481242 RHOHQ15669 191 aa7.47□□□□□ -1.21
GARNL3-216ENST00000481242 FAM120AOSQ5T036 256 aa7.47□□□□□ -1.21
GARNL3-216ENST00000481242 SH2D6Q7Z4S9 175 aa7.47□□□□□ -1.21
GARNL3-216ENST00000481242 PRB1P04280 392 aa7.47□□□□□ -1.21
GARNL3-216ENST00000481242 LYPD6Q86Y78 171 aa7.47□□□□□ -1.21
GARNL3-216ENST00000481242 TRAV25A0A0B4J276 109 aa7.47□□□□□ -1.21
GARNL3-216ENST00000481242 LOXL1Q08397 574 aaPredicted RBP7.47□□□□□ -1.21
GARNL3-216ENST00000481242 Q8N8P6 123 aa7.47□□□□□ -1.21
GARNL3-216ENST00000481242 DOCK11Q5JSL3 2073 aa7.47□□□□□ -1.21
GARNL3-216ENST00000481242 C18orf32Q8TCD1 76 aa7.47□□□□□ -1.21
GARNL3-216ENST00000481242 SIGLEC8Q9NYZ4 499 aa7.47□□□□□ -1.21
GARNL3-216ENST00000481242 MYCNOSP40205 109 aa7.46□□□□□ -1.21
GARNL3-216ENST00000481242 VWC2Q2TAL6 325 aa7.46□□□□□ -1.21
GARNL3-216ENST00000481242 ANXA2RQ3ZCQ2 193 aa7.46□□□□□ -1.21
GARNL3-216ENST00000481242 LINC00479Q96M42 142 aa7.46□□□□□ -1.21
GARNL3-216ENST00000481242 IGHV1-24A0A0C4DH33 117 aa7.46□□□□□ -1.22
GARNL3-216ENST00000481242 A0A0U1RRA0 63 aa7.46□□□□□ -1.22
GARNL3-216ENST00000481242 SDHAF1A6NFY7 115 aa7.46□□□□□ -1.22
GARNL3-216ENST00000481242 DIAPH2-AS1Q14236 149 aa7.46□□□□□ -1.22
GARNL3-216ENST00000481242 GUSBP1Q15486 140 aa7.46□□□□□ -1.22
GARNL3-216ENST00000481242 ZC2HC1BQ5TFG8 222 aa7.46□□□□□ -1.22
GARNL3-216ENST00000481242 GAGE2AQ6NT46 116 aa7.46□□□□□ -1.22
GARNL3-216ENST00000481242 SEM1Q6ZVN7 128 aa7.46□□□□□ -1.22
GARNL3-216ENST00000481242 ATP6V0E2Q8NHE4 81 aa7.46□□□□□ -1.22
GARNL3-216ENST00000481242 DNAJC30Q96LL9 226 aa7.46□□□□□ -1.22
GARNL3-216ENST00000481242 Q8NA96 180 aa7.46□□□□□ -1.22
GARNL3-216ENST00000481242 NAV3Q8IVL0 2385 aa7.46□□□□□ -1.22
GARNL3-216ENST00000481242 LTBP2Q14767 1821 aa7.45□□□□□ -1.22
GARNL3-216ENST00000481242 IGHV7-81A0A0B4J1V7 117 aa7.45□□□□□ -1.22
GARNL3-216ENST00000481242 K7EMI3 77 aa7.45□□□□□ -1.22
GARNL3-216ENST00000481242 C2orf66Q6UXQ4 117 aa7.45□□□□□ -1.22
GARNL3-216ENST00000481242 C20orf78Q9BR46 151 aa7.45□□□□□ -1.22
GARNL3-216ENST00000481242 PLXNB3Q9ULL4 1909 aa7.45□□□□□ -1.22
GARNL3-216ENST00000481242 K7EMT4 169 aa7.45□□□□□ -1.22
GARNL3-216ENST00000481242 INSL3P51460 131 aa7.45□□□□□ -1.22
GARNL3-216ENST00000481242 KLK9Q9UKQ9 250 aa7.45□□□□□ -1.22
GARNL3-216ENST00000481242 CCDC168Q8NDH2 2452 aa7.45□□□□□ -1.22
GARNL3-216ENST00000481242 KNCNA6PVL3 124 aa7.45□□□□□ -1.22
GARNL3-216ENST00000481242 TRACP01848 142 aa7.45□□□□□ -1.22
GARNL3-216ENST00000481242 CDK2AP2O75956 126 aa7.45□□□□□ -1.22
GARNL3-216ENST00000481242 NDUFC2O95298 119 aa7.45□□□□□ -1.22
GARNL3-216ENST00000481242 IGHV4-38-2P0DP08 117 aa7.45□□□□□ -1.22
GARNL3-216ENST00000481242 ZNRF2Q8NHG8 242 aa7.45□□□□□ -1.22
GARNL3-216ENST00000481242 IGHV3-64A0A075B6Q5 118 aa7.44□□□□□ -1.22
GARNL3-216ENST00000481242 FSTL3O95633 263 aa7.44□□□□□ -1.22
GARNL3-216ENST00000481242 IGLL1P15814 213 aa7.44□□□□□ -1.22
GARNL3-216ENST00000481242 ZNF726P1Q15940 193 aa7.44□□□□□ -1.22
GARNL3-216ENST00000481242 ETDBQ3ZM63 59 aa7.44□□□□□ -1.22
GARNL3-216ENST00000481242 FXYD5Q96DB9 178 aa7.44□□□□□ -1.22
GARNL3-216ENST00000481242 WNK1Q9H4A3 2382 aa7.44□□□□□ -1.22
GARNL3-216ENST00000481242 CLPSL1A2RUU4 121 aa7.44□□□□□ -1.22
GARNL3-216ENST00000481242 C11orf68Q9H3H3 251 aaKnown RBP7.44□□□□□ -1.22
GARNL3-216ENST00000481242 PRSS57Q6UWY2 283 aa7.44□□□□□ -1.22
GARNL3-216ENST00000481242 TP53TG1Q9Y2A0 90 aa7.44□□□□□ -1.22
GARNL3-216ENST00000481242 IGLV11-55A0A075B6I3 123 aa7.44□□□□□ -1.22
GARNL3-216ENST00000481242 INS-IGF2F8WCM5 200 aa7.44□□□□□ -1.22
GARNL3-216ENST00000481242 IGLV1-47P01700 117 aa7.44□□□□□ -1.22
GARNL3-216ENST00000481242 GP9P14770 177 aa7.44□□□□□ -1.22
GARNL3-216ENST00000481242 DENND4CQ5VZ89 1909 aa7.43□□□□□ -1.22
GARNL3-216ENST00000481242 GATD1Q8NB37 220 aa7.43□□□□□ -1.22
GARNL3-216ENST00000481242 SPANXB1Q9NS25 103 aaPredicted RBP7.43□□□□□ -1.22
GARNL3-216ENST00000481242 hDV102S1A0JD36 115 aa7.43□□□□□ -1.22
GARNL3-216ENST00000481242 SFTA2Q6UW10 78 aa7.43□□□□□ -1.22
GARNL3-216ENST00000481242 Q8N9W7 124 aa7.43□□□□□ -1.22
GARNL3-216ENST00000481242 WIPF2Q8TF74 440 aaPredicted RBP7.43□□□□□ -1.22
GARNL3-216ENST00000481242 C8orf49Q96NF6 230 aa7.43□□□□□ -1.22
GARNL3-216ENST00000481242 CHAC1Q9BUX1 264 aa7.43□□□□□ -1.22
GARNL3-216ENST00000481242 TMEM213A2RRL7 107 aa7.42□□□□□ -1.22
GARNL3-216ENST00000481242 TAX1BP3O14907 124 aa7.42□□□□□ -1.22
GARNL3-216ENST00000481242 IGHG2P01859 326 aa7.42□□□□□ -1.22
GARNL3-216ENST00000481242 SPART-AS1P0CW21 52 aa7.42□□□□□ -1.22
GARNL3-216ENST00000481242 C5orf56Q8N8D9 126 aa7.42□□□□□ -1.22
GARNL3-216ENST00000481242 GPHB5Q86YW7 130 aa7.42□□□□□ -1.22
GARNL3-216ENST00000481242 CLUHP3Q96NS8 147 aa7.42□□□□□ -1.22
GARNL3-216ENST00000481242 SMIM2Q9BVW6 85 aa7.42□□□□□ -1.22
GARNL3-216ENST00000481242 SMKR1H3BMG3 65 aa7.42□□□□□ -1.22
GARNL3-216ENST00000481242 ATP5G1P05496 136 aa7.42□□□□□ -1.22
GARNL3-216ENST00000481242 TRAV12-2A0A075B6T6 113 aa7.41□□□□□ -1.22
GARNL3-216ENST00000481242 CRYGCP07315 174 aa7.41□□□□□ -1.22
GARNL3-216ENST00000481242 HERVK_113P63121 156 aa7.41□□□□□ -1.22
GARNL3-216ENST00000481242 NKAPP1Q8N9T2 125 aa7.41□□□□□ -1.22
GARNL3-216ENST00000481242 PRB4P10163 310 aaPredicted RBP7.41□□□□□ -1.22
GARNL3-216ENST00000481242 TNCP24821 2201 aa7.41□□□□□ -1.22
GARNL3-216ENST00000481242 BLCAPP62952 87 aa7.41□□□□□ -1.22
GARNL3-216ENST00000481242 C16orf74Q96GX8 76 aa7.41□□□□□ -1.22
GARNL3-216ENST00000481242 AJUBAQ96IF1 538 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms