RNA–Protein interactions for RNA: ENST00000462181.1

CALD1-213, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 188 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-213ENST00000462181 ASB16-AS1Q495Z4 193 aa0.64□□□□□ -2.31
CALD1-213ENST00000462181 HIST2H3PS2Q5TEC6 136 aa0.64□□□□□ -2.31
CALD1-213ENST00000462181 UBE2DNLQ8IWF7 75 aa0.64□□□□□ -2.31
CALD1-213ENST00000462181 TERB2Q8NHR7 220 aa0.64□□□□□ -2.31
CALD1-213ENST00000462181 AMELYQ99218 206 aa0.64□□□□□ -2.31
CALD1-213ENST00000462181 CMTM6Q9NX76 183 aa0.64□□□□□ -2.31
CALD1-213ENST00000462181 UBL3O95164 117 aa0.63□□□□□ -2.31
CALD1-213ENST00000462181 IGF2P01344 180 aa0.63□□□□□ -2.31
CALD1-213ENST00000462181 TFAMQ00059 246 aaKnown RBP0.63□□□□□ -2.31
CALD1-213ENST00000462181 LPCAT3Q6P1A2 487 aa0.63□□□□□ -2.31
CALD1-213ENST00000462181 ALKAL1Q6UXT8 129 aa0.63□□□□□ -2.31
CALD1-213ENST00000462181 Q8N6K4 173 aa0.63□□□□□ -2.31
CALD1-213ENST00000462181 SFT2D1Q8WV19 159 aa0.63□□□□□ -2.31
CALD1-213ENST00000462181 COMMD5Q9GZQ3 224 aa0.63□□□□□ -2.31
CALD1-213ENST00000462181 TAS2R4Q9NYW5 299 aa0.63□□□□□ -2.31
CALD1-213ENST00000462181 PQLC2LA1A4F0 135 aa0.62□□□□□ -2.31
CALD1-213ENST00000462181 DCTN3O75935 186 aa0.62□□□□□ -2.31
CALD1-213ENST00000462181 HLA-DRB1P01911 266 aa0.62□□□□□ -2.31
CALD1-213ENST00000462181 TPM3P06753 285 aa0.62□□□□□ -2.31
CALD1-213ENST00000462181 CRHP06850 196 aa0.62□□□□□ -2.31
CALD1-213ENST00000462181 RNASE10Q5GAN6 216 aaKnown RBP0.62□□□□□ -2.31
CALD1-213ENST00000462181 LYG2Q86SG7 212 aa0.62□□□□□ -2.31
CALD1-213ENST00000462181 PATE1Q8WXA2 126 aa0.62□□□□□ -2.31
CALD1-213ENST00000462181 PRTFDC1Q9NRG1 225 aa0.62□□□□□ -2.31
CALD1-213ENST00000462181 SLC39A9Q9NUM3 307 aa0.62□□□□□ -2.31
CALD1-213ENST00000462181 RASL12Q9NYN1 266 aa0.62□□□□□ -2.31
CALD1-213ENST00000462181 NKIRAS1Q9NYS0 192 aa0.62□□□□□ -2.31
CALD1-213ENST00000462181 SULT1B1O43704 296 aa0.61□□□□□ -2.31
CALD1-213ENST00000462181 OR2B3O76000 313 aa0.61□□□□□ -2.31
CALD1-213ENST00000462181 TCL1BO95988 128 aa0.61□□□□□ -2.31
CALD1-213ENST00000462181 NCMAPQ5T1S8 102 aa0.61□□□□□ -2.31
CALD1-213ENST00000462181 HIST3H2BBQ8N257 126 aa0.61□□□□□ -2.31
CALD1-213ENST00000462181 SLC35B4Q969S0 331 aa0.61□□□□□ -2.31
CALD1-213ENST00000462181 C11orf68Q9H3H3 251 aaKnown RBP0.61□□□□□ -2.31
CALD1-213ENST00000462181 ERGIC3Q9Y282 383 aa0.61□□□□□ -2.31
CALD1-213ENST00000462181 ATP6V1DQ9Y5K8 247 aa0.61□□□□□ -2.31
CALD1-213ENST00000462181 NBDYA0A0U1RRE5 68 aa0.6□□□□□ -2.31
CALD1-213ENST00000462181 DPRXA6NFQ7 191 aa0.6□□□□□ -2.31
CALD1-213ENST00000462181 KCNK1O00180 336 aa0.6□□□□□ -2.31
CALD1-213ENST00000462181 PSMD12O00232 456 aaPredicted RBP0.6□□□□□ -2.31
CALD1-213ENST00000462181 INE1O15225 51 aa0.6□□□□□ -2.31
CALD1-213ENST00000462181 IFNA21P01568 189 aa0.6□□□□□ -2.31
CALD1-213ENST00000462181 IFNA17P01571 189 aa0.6□□□□□ -2.31
CALD1-213ENST00000462181 MGST1P10620 155 aaKnown RBP0.6□□□□□ -2.31
CALD1-213ENST00000462181 INSL4Q14641 139 aa0.6□□□□□ -2.31
CALD1-213ENST00000462181 CCL4L1Q8NHW4 92 aa0.6□□□□□ -2.31
CALD1-213ENST00000462181 H1FXQ92522 213 aaKnown RBP0.6□□□□□ -2.31
CALD1-213ENST00000462181 TOMM6Q96B49 74 aa0.6□□□□□ -2.31
CALD1-213ENST00000462181 TRAV26-2A0A0B4J265 109 aa0.59□□□□□ -2.31
CALD1-213ENST00000462181 TMEM114B3SHH9 223 aa0.59□□□□□ -2.31
CALD1-213ENST00000462181 LYZL6O75951 148 aa0.59□□□□□ -2.31
CALD1-213ENST00000462181 PROSCO94903 275 aa0.59□□□□□ -2.31
CALD1-213ENST00000462181 TNFP01375 233 aa0.59□□□□□ -2.31
CALD1-213ENST00000462181 TNNC2P02585 160 aa0.59□□□□□ -2.31
CALD1-213ENST00000462181 TFF1P04155 84 aa0.59□□□□□ -2.31
CALD1-213ENST00000462181 TPM4P67936 248 aa0.59□□□□□ -2.31
CALD1-213ENST00000462181 COX6B2Q6YFQ2 88 aa0.59□□□□□ -2.31
CALD1-213ENST00000462181 C20orf196Q8IYI0 205 aa0.59□□□□□ -2.31
CALD1-213ENST00000462181 DEFB108BQ8NET1 73 aa0.59□□□□□ -2.31
CALD1-213ENST00000462181 NIPSNAP1Q9BPW8 284 aa0.59□□□□□ -2.31
CALD1-213ENST00000462181 SNRNP200O75643 2136 aaKnown RBP0.58□□□□□ -2.32
CALD1-213ENST00000462181 TRAV9-1A0A075B6T8 112 aa0.58□□□□□ -2.32
CALD1-213ENST00000462181 TRAV12-1A0A0B4J245 112 aa0.58□□□□□ -2.32
CALD1-213ENST00000462181 C1QBP02746 253 aa0.58□□□□□ -2.32
CALD1-213ENST00000462181 CALB1P05937 261 aa0.58□□□□□ -2.32
CALD1-213ENST00000462181 SNRPD2P62316 118 aaKnown RBP0.58□□□□□ -2.32
CALD1-213ENST00000462181 BORCS5Q969J3 196 aa0.58□□□□□ -2.32
CALD1-213ENST00000462181 PTH2Q96A98 100 aa0.58□□□□□ -2.32
CALD1-213ENST00000462181 OR52E6Q96RD3 313 aa0.58□□□□□ -2.32
CALD1-213ENST00000462181 LLPHQ9BRT6 129 aaKnown RBP0.58□□□□□ -2.32
CALD1-213ENST00000462181 MRPS26Q9BYN8 205 aaKnown RBP0.58□□□□□ -2.32
CALD1-213ENST00000462181 EXOC1LA0A1B0GW35 172 aa0.57□□□□□ -2.32
CALD1-213ENST00000462181 TCRBV4S1A1TA0A5B7 111 aa0.57□□□□□ -2.32
CALD1-213ENST00000462181 H3BSH0 61 aa0.57□□□□□ -2.32
CALD1-213ENST00000462181 CD79AP11912 226 aa0.57□□□□□ -2.32
CALD1-213ENST00000462181 SPCS3P61009 180 aa0.57□□□□□ -2.32
CALD1-213ENST00000462181 HIST3H3Q16695 136 aa0.57□□□□□ -2.32
CALD1-213ENST00000462181 SPATA8Q6RVD6 105 aa0.57□□□□□ -2.32
CALD1-213ENST00000462181 ANKRD29Q8N6D5 301 aa0.57□□□□□ -2.32
CALD1-213ENST00000462181 CDC42SE1Q9NRR8 79 aa0.57□□□□□ -2.32
CALD1-213ENST00000462181 BUB1B-PAK6H3BSN5 160 aa0.56□□□□□ -2.32
CALD1-213ENST00000462181 FAAHO00519 579 aa0.56□□□□□ -2.32
CALD1-213ENST00000462181 NCR3O14931 201 aa0.56□□□□□ -2.32
CALD1-213ENST00000462181 ZNF25P17030 456 aaPredicted RBP0.56□□□□□ -2.32
CALD1-213ENST00000462181 PSME3P61289 254 aa0.56□□□□□ -2.32
CALD1-213ENST00000462181 MPV17LQ2QL34 196 aa0.56□□□□□ -2.32
CALD1-213ENST00000462181 C1orf137Q5JT78 98 aa0.56□□□□□ -2.32
CALD1-213ENST00000462181 TEX261Q6UWH6 196 aa0.56□□□□□ -2.32
CALD1-213ENST00000462181 SOSTDC1Q6X4U4 206 aa0.56□□□□□ -2.32
CALD1-213ENST00000462181 OR10J5Q8NHC4 309 aa0.56□□□□□ -2.32
CALD1-213ENST00000462181 GPR146Q96CH1 333 aa0.56□□□□□ -2.32
CALD1-213ENST00000462181 TMEM56-RWDD3S4R434 201 aa0.56□□□□□ -2.32
CALD1-213ENST00000462181 U3KQ87 197 aa0.56□□□□□ -2.32
CALD1-213ENST00000462181 A0A1W2PPM0 123 aa0.55□□□□□ -2.32
CALD1-213ENST00000462181 CNIH1O95406 144 aa0.55□□□□□ -2.32
CALD1-213ENST00000462181 HIST1H1TP22492 207 aaPredicted RBP0.55□□□□□ -2.32
CALD1-213ENST00000462181 CDC42P60953 191 aa0.55□□□□□ -2.32
CALD1-213ENST00000462181 SPOPLQ6IQ16 392 aa0.55□□□□□ -2.32
CALD1-213ENST00000462181 LINC00322Q6ZN03 302 aaPredicted RBP0.55□□□□□ -2.32
CALD1-213ENST00000462181 OSTCQ9NRP0 149 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms