RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 LYPD5Q6UWN5 251 aa10.61□□□□□ -0.71
NUP50-213ENST00000461437 IQCF2Q8IXL9 164 aa10.61□□□□□ -0.71
NUP50-213ENST00000461437 PSMG3Q9BT73 122 aaPredicted RBP10.61□□□□□ -0.71
NUP50-213ENST00000461437 C11orf21Q9P2W6 132 aa10.61□□□□□ -0.71
NUP50-213ENST00000461437 TRAV21A0A0B4J279 112 aa10.6□□□□□ -0.71
NUP50-213ENST00000461437 K7EQD1 137 aa10.6□□□□□ -0.71
NUP50-213ENST00000461437 SIVA1O15304 175 aa10.6□□□□□ -0.71
NUP50-213ENST00000461437 TCRAP04437 139 aa10.6□□□□□ -0.71
NUP50-213ENST00000461437 GYPEP15421 78 aa10.6□□□□□ -0.71
NUP50-213ENST00000461437 KRTAP10-2P60368 255 aa10.6□□□□□ -0.71
NUP50-213ENST00000461437 SUMO1P63165 101 aaKnown RBP10.6□□□□□ -0.71
NUP50-213ENST00000461437 ZNF726P1Q15940 193 aa10.6□□□□□ -0.71
NUP50-213ENST00000461437 RASL10AQ92737 203 aa10.6□□□□□ -0.71
NUP50-213ENST00000461437 SPXQ9BT56 116 aa10.6□□□□□ -0.71
NUP50-213ENST00000461437 G3V3Q6 166 aa10.59□□□□□ -0.71
NUP50-213ENST00000461437 IGLV2-11P01706 119 aa10.59□□□□□ -0.71
NUP50-213ENST00000461437 TDRG1Q3Y452 100 aa10.59□□□□□ -0.71
NUP50-213ENST00000461437 PRNTQ86SH4 94 aa10.59□□□□□ -0.71
NUP50-213ENST00000461437 WFDC10BQ8IUB3 73 aa10.59□□□□□ -0.71
NUP50-213ENST00000461437 C5orf17Q8NAS9 161 aa10.59□□□□□ -0.71
NUP50-213ENST00000461437 SUN5Q8TC36 379 aa10.59□□□□□ -0.71
NUP50-213ENST00000461437 TNFSF18Q9UNG2 199 aa10.59□□□□□ -0.71
NUP50-213ENST00000461437 PSG8Q9UQ74 426 aa10.59□□□□□ -0.71
NUP50-213ENST00000461437 A0A1W2PPQ1 181 aa10.58□□□□□ -0.72
NUP50-213ENST00000461437 C9JCJ5 164 aa10.58□□□□□ -0.72
NUP50-213ENST00000461437 SMLR1H3BR10 107 aa10.58□□□□□ -0.72
NUP50-213ENST00000461437 M0R2P5 195 aa10.58□□□□□ -0.72
NUP50-213ENST00000461437 FGF8P55075 233 aaPredicted RBP10.58□□□□□ -0.72
NUP50-213ENST00000461437 UBE2G2P60604 165 aa10.58□□□□□ -0.72
NUP50-213ENST00000461437 MRPL23Q16540 153 aaKnown RBP10.58□□□□□ -0.72
NUP50-213ENST00000461437 INO80EQ8NBZ0 244 aaPredicted RBP10.58□□□□□ -0.72
NUP50-213ENST00000461437 OR4C5Q8NGB2 326 aa10.58□□□□□ -0.72
NUP50-213ENST00000461437 OR2T35Q8NGX2 323 aa10.58□□□□□ -0.72
NUP50-213ENST00000461437 LINC00479Q96M42 142 aa10.58□□□□□ -0.72
NUP50-213ENST00000461437 ACTR3CQ9C0K3 210 aaPredicted RBP10.58□□□□□ -0.72
NUP50-213ENST00000461437 SDF2L1Q9HCN8 221 aa10.58□□□□□ -0.72
NUP50-213ENST00000461437 IGHV3-73A0A0B4J1V6 119 aa10.57□□□□□ -0.72
NUP50-213ENST00000461437 TRAV4A0A0B4J268 109 aa10.57□□□□□ -0.72
NUP50-213ENST00000461437 TRAV34A0A0B4J273 112 aa10.57□□□□□ -0.72
NUP50-213ENST00000461437 CXorf1O96002 111 aa10.57□□□□□ -0.72
NUP50-213ENST00000461437 GCGP01275 180 aa10.57□□□□□ -0.72
NUP50-213ENST00000461437 SRIP30626 198 aa10.57□□□□□ -0.72
NUP50-213ENST00000461437 SERF2P84101 59 aa10.57□□□□□ -0.72
NUP50-213ENST00000461437 SLAQ13239 276 aa10.57□□□□□ -0.72
NUP50-213ENST00000461437 DPPA3Q6W0C5 159 aa10.57□□□□□ -0.72
NUP50-213ENST00000461437 Q6ZRN7 208 aaPredicted RBP10.57□□□□□ -0.72
NUP50-213ENST00000461437 NEGR1Q7Z3B1 354 aa10.57□□□□□ -0.72
NUP50-213ENST00000461437 ASB13Q8WXK3 278 aa10.57□□□□□ -0.72
NUP50-213ENST00000461437 NDFIP1Q9BT67 221 aa10.57□□□□□ -0.72
NUP50-213ENST00000461437 EPDR1Q9UM22 224 aa10.57□□□□□ -0.72
NUP50-213ENST00000461437 MBP02144 154 aa10.56□□□□□ -0.72
NUP50-213ENST00000461437 FLI1Q01543 452 aaPredicted RBP10.56□□□□□ -0.72
NUP50-213ENST00000461437 ARL6IP6Q8N6S5 226 aa10.56□□□□□ -0.72
NUP50-213ENST00000461437 PCNPQ8WW12 178 aaKnown RBP10.56□□□□□ -0.72
NUP50-213ENST00000461437 TMEM167BQ9NRX6 74 aa10.56□□□□□ -0.72
NUP50-213ENST00000461437 CYB561D1Q8N8Q1 229 aa10.55□□□□□ -0.72
NUP50-213ENST00000461437 BORCS7-ASMTA0A0B4J1R7 106 aa10.54□□□□□ -0.72
NUP50-213ENST00000461437 ARPC5O15511 151 aa10.54□□□□□ -0.72
NUP50-213ENST00000461437 KCNS1Q96KK3 526 aa10.54□□□□□ -0.72
NUP50-213ENST00000461437 CTXND1A0A1B0GTU2 59 aa10.53□□□□□ -0.72
NUP50-213ENST00000461437 SERTM2A0A1B0GWG4 89 aa10.53□□□□□ -0.72
NUP50-213ENST00000461437 PGPEP1LA6NFU8 196 aa10.53□□□□□ -0.72
NUP50-213ENST00000461437 K7EQM0 130 aa10.53□□□□□ -0.72
NUP50-213ENST00000461437 DNAH10OSP0CZ25 163 aa10.53□□□□□ -0.72
NUP50-213ENST00000461437 GATA1P15976 413 aaPredicted RBP10.53□□□□□ -0.72
NUP50-213ENST00000461437 RGS21Q2M5E4 152 aa10.53□□□□□ -0.72
NUP50-213ENST00000461437 ZNF876PQ49A33 203 aa10.53□□□□□ -0.72
NUP50-213ENST00000461437 SMUG1Q53HV7 270 aa10.53□□□□□ -0.72
NUP50-213ENST00000461437 NHLRC2Q8NBF2 726 aa10.53□□□□□ -0.72
NUP50-213ENST00000461437 CYTL1Q9NRR1 136 aa10.53□□□□□ -0.72
NUP50-213ENST00000461437 PFN1P07737 140 aaKnown RBP10.52□□□□□ -0.73
NUP50-213ENST00000461437 RNASE3P12724 160 aaKnown RBP10.52□□□□□ -0.73
NUP50-213ENST00000461437 CFAP126Q5VTH2 177 aa10.52□□□□□ -0.73
NUP50-213ENST00000461437 C9orf85Q96MD7 179 aa10.52□□□□□ -0.73
NUP50-213ENST00000461437 LY96Q9Y6Y9 160 aa10.52□□□□□ -0.73
NUP50-213ENST00000461437 ARL2-SNX15V9GYD0 113 aa10.52□□□□□ -0.73
NUP50-213ENST00000461437 IGKV3D-20A0A0C4DH25 116 aa10.51□□□□□ -0.73
NUP50-213ENST00000461437 A0A1W2PRE2 83 aa10.51□□□□□ -0.73
NUP50-213ENST00000461437 FBLL1A6NHQ2 334 aaKnown RBP10.51□□□□□ -0.73
NUP50-213ENST00000461437 TAAR5O14804 337 aa10.51□□□□□ -0.73
NUP50-213ENST00000461437 RS1O15537 224 aa10.51□□□□□ -0.73
NUP50-213ENST00000461437 IFNA7P01567 189 aa10.51□□□□□ -0.73
NUP50-213ENST00000461437 ORM1P02763 201 aa10.51□□□□□ -0.73
NUP50-213ENST00000461437 BTF3P20290 206 aaKnown RBP10.51□□□□□ -0.73
NUP50-213ENST00000461437 ZFP69Q49AA0 526 aa10.51□□□□□ -0.73
NUP50-213ENST00000461437 ZNF506Q5JVG8 444 aa10.51□□□□□ -0.73
NUP50-213ENST00000461437 AKR1C8PQ5T2L2 129 aa10.51□□□□□ -0.73
NUP50-213ENST00000461437 MAPKAPK5-AS1Q8N8E1 139 aa10.51□□□□□ -0.73
NUP50-213ENST00000461437 SLC25A29Q8N8R3 303 aa10.51□□□□□ -0.73
NUP50-213ENST00000461437 FAM74A7A6NL05 159 aa10.5□□□□□ -0.73
NUP50-213ENST00000461437 PEX7O00628 323 aa10.5□□□□□ -0.73
NUP50-213ENST00000461437 FHITP49789 147 aa10.5□□□□□ -0.73
NUP50-213ENST00000461437 Q86TA4 180 aa10.5□□□□□ -0.73
NUP50-213ENST00000461437 TXNDC17Q9BRA2 123 aa10.5□□□□□ -0.73
NUP50-213ENST00000461437 MAP1LC3B2A6NCE7 125 aa10.49□□□□□ -0.73
NUP50-213ENST00000461437 CDK2AP2O75956 126 aa10.49□□□□□ -0.73
NUP50-213ENST00000461437 PPT1P50897 306 aa10.49□□□□□ -0.73
NUP50-213ENST00000461437 Q6ZSN1 163 aa10.49□□□□□ -0.73
NUP50-213ENST00000461437 MAP1LC3BQ9GZQ8 125 aa10.49□□□□□ -0.73
NUP50-213ENST00000461437 JPT2Q9H910 190 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms