RNA–Protein interactions for RNA: ENST00000361125.1

SMURF1-201, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene SMURF1, Length 5,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-201ENST00000361125 EGR2P11161 476 aaPredicted RBP16.5■□□□□ 0.23
SMURF1-201ENST00000361125 KIAA1549LQ6ZVL6 1849 aa16.5■□□□□ 0.23
SMURF1-201ENST00000361125 ATP6V0BQ99437 205 aa16.5■□□□□ 0.23
SMURF1-201ENST00000361125 SPRY4Q9C004 299 aa16.49■□□□□ 0.23
SMURF1-201ENST00000361125 MRPL53Q96EL3 112 aaKnown RBP16.49■□□□□ 0.23
SMURF1-201ENST00000361125 BVES-AS1Q5T3Y7 98 aa16.49■□□□□ 0.23
SMURF1-201ENST00000361125 C9JAW5 83 aa16.49■□□□□ 0.23
SMURF1-201ENST00000361125 F8WEM9 126 aa16.48■□□□□ 0.23
SMURF1-201ENST00000361125 I3L2K1 104 aa16.48■□□□□ 0.23
SMURF1-201ENST00000361125 IGLV2-14P01704 120 aa16.48■□□□□ 0.23
SMURF1-201ENST00000361125 MRAPQ8TCY5 172 aa16.48■□□□□ 0.23
SMURF1-201ENST00000361125 SMIM2Q9BVW6 85 aa16.48■□□□□ 0.23
SMURF1-201ENST00000361125 NXPH4O95158 308 aa16.48■□□□□ 0.23
SMURF1-201ENST00000361125 C11orf1Q9H5F2 150 aa16.48■□□□□ 0.23
SMURF1-201ENST00000361125 OBSL1O75147 1896 aa16.48■□□□□ 0.23
SMURF1-201ENST00000361125 ZFAND6Q6FIF0 208 aa16.47■□□□□ 0.23
SMURF1-201ENST00000361125 MRPL35Q9NZE8 188 aaKnown RBP16.47■□□□□ 0.23
SMURF1-201ENST00000361125 A0A0J9YY99 117 aa16.47■□□□□ 0.23
SMURF1-201ENST00000361125 SPINK8P0C7L1 97 aa16.47■□□□□ 0.23
SMURF1-201ENST00000361125 U3KQE9 123 aa16.46■□□□□ 0.23
SMURF1-201ENST00000361125 COL4A4P53420 1690 aaPredicted RBP16.46■□□□□ 0.23
SMURF1-201ENST00000361125 C10orf105Q8TEF2 133 aa16.46■□□□□ 0.23
SMURF1-201ENST00000361125 OVOL2Q9BRP0 275 aa16.46■□□□□ 0.23
SMURF1-201ENST00000361125 GAGE2BQ13066 116 aa16.46■□□□□ 0.23
SMURF1-201ENST00000361125 GAGE2EQ4V326 116 aa16.46■□□□□ 0.23
SMURF1-201ENST00000361125 MORN5Q5VZ52 161 aa16.46■□□□□ 0.23
SMURF1-201ENST00000361125 GAGE2AQ6NT46 116 aa16.46■□□□□ 0.23
SMURF1-201ENST00000361125 GAGE2DQ9UEU5 116 aa16.46■□□□□ 0.23
SMURF1-201ENST00000361125 AJUBAQ96IF1 538 aa16.46■□□□□ 0.22
SMURF1-201ENST00000361125 K7EIM0 57 aa16.45■□□□□ 0.22
SMURF1-201ENST00000361125 K7EP34 96 aa16.45■□□□□ 0.22
SMURF1-201ENST00000361125 ZFP36P26651 326 aaKnown RBP16.45■□□□□ 0.22
SMURF1-201ENST00000361125 ADAMTS9Q9P2N4 1935 aa16.45■□□□□ 0.22
SMURF1-201ENST00000361125 CDK2AP2O75956 126 aa16.44■□□□□ 0.22
SMURF1-201ENST00000361125 KLF12Q9Y4X4 402 aa16.44■□□□□ 0.22
SMURF1-201ENST00000361125 CACNA1GO43497 2377 aa16.44■□□□□ 0.22
SMURF1-201ENST00000361125 TDRG1Q3Y452 100 aa16.44■□□□□ 0.22
SMURF1-201ENST00000361125 IGLV11-55A0A075B6I3 123 aa16.43■□□□□ 0.22
SMURF1-201ENST00000361125 ANGP03950 147 aaKnown RBP16.43■□□□□ 0.22
SMURF1-201ENST00000361125 Q6ZVH6 145 aa16.43■□□□□ 0.22
SMURF1-201ENST00000361125 NDUFA12Q9UI09 145 aa16.42■□□□□ 0.22
SMURF1-201ENST00000361125 DKK2Q9UBU2 259 aa16.42■□□□□ 0.22
SMURF1-201ENST00000361125 RBAKDNA6NC62 111 aa16.42■□□□□ 0.22
SMURF1-201ENST00000361125 K7EP13 123 aa16.42■□□□□ 0.22
SMURF1-201ENST00000361125 C5orf56Q8N8D9 126 aa16.42■□□□□ 0.22
SMURF1-201ENST00000361125 GP9P14770 177 aa16.42■□□□□ 0.22
SMURF1-201ENST00000361125 Q8N9W7 124 aa16.42■□□□□ 0.22
SMURF1-201ENST00000361125 SPAG8Q99932 426 aaPredicted RBP16.42■□□□□ 0.22
SMURF1-201ENST00000361125 ZNF747Q9BV97 191 aa16.42■□□□□ 0.22
SMURF1-201ENST00000361125 IGLV2-23P01705 113 aa16.41■□□□□ 0.22
SMURF1-201ENST00000361125 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.41■□□□□ 0.22
SMURF1-201ENST00000361125 IGKV2-29A2NJV5 120 aaPredicted RBP16.41■□□□□ 0.22
SMURF1-201ENST00000361125 GATA1P15976 413 aaPredicted RBP16.41■□□□□ 0.22
SMURF1-201ENST00000361125 PATE2Q6UY27 113 aa16.41■□□□□ 0.22
SMURF1-201ENST00000361125 C20orf78Q9BR46 151 aa16.41■□□□□ 0.22
SMURF1-201ENST00000361125 A0A1W2PPM0 123 aa16.4■□□□□ 0.22
SMURF1-201ENST00000361125 CTSGP08311 255 aa16.4■□□□□ 0.22
SMURF1-201ENST00000361125 MSMPQ1L6U9 139 aa16.4■□□□□ 0.22
SMURF1-201ENST00000361125 NKAPP1Q8N9T2 125 aa16.4■□□□□ 0.22
SMURF1-201ENST00000361125 LTBP2Q14767 1821 aa16.4■□□□□ 0.22
SMURF1-201ENST00000361125 ALPK3Q96L96 1907 aa16.4■□□□□ 0.22
SMURF1-201ENST00000361125 ZNF48Q96MX3 618 aaPredicted RBP16.4■□□□□ 0.22
SMURF1-201ENST00000361125 Q8N7P7 452 aa16.4■□□□□ 0.22
SMURF1-201ENST00000361125 KMT2EQ8IZD2 1858 aa16.4■□□□□ 0.22
SMURF1-201ENST00000361125 CEND1Q8N111 149 aa16.4■□□□□ 0.22
SMURF1-201ENST00000361125 Q6ZQT7 251 aa16.39■□□□□ 0.21
SMURF1-201ENST00000361125 Q8NA96 180 aa16.39■□□□□ 0.21
SMURF1-201ENST00000361125 DNAJC30Q96LL9 226 aa16.39■□□□□ 0.21
SMURF1-201ENST00000361125 PRSS29PA6NIE9 313 aa16.38■□□□□ 0.21
SMURF1-201ENST00000361125 IGHV4OR15-8A0A075B7B6 117 aa16.38■□□□□ 0.21
SMURF1-201ENST00000361125 A0A087WW49 117 aa16.38■□□□□ 0.21
SMURF1-201ENST00000361125 K7ERJ3 54 aa16.38■□□□□ 0.21
SMURF1-201ENST00000361125 IGKV1-17P01599 117 aa16.38■□□□□ 0.21
SMURF1-201ENST00000361125 ODF3L1Q8IXM7 274 aa16.38■□□□□ 0.21
SMURF1-201ENST00000361125 F8VRH5 84 aa16.37■□□□□ 0.21
SMURF1-201ENST00000361125 SIVA1O15304 175 aa16.37■□□□□ 0.21
SMURF1-201ENST00000361125 RHOHQ15669 191 aa16.37■□□□□ 0.21
SMURF1-201ENST00000361125 HERVK_113P63121 156 aa16.36■□□□□ 0.21
SMURF1-201ENST00000361125 SRSF2Q01130 221 aaKnown RBP16.36■□□□□ 0.21
SMURF1-201ENST00000361125 CGB3P0DN86 165 aa16.36■□□□□ 0.21
SMURF1-201ENST00000361125 XCL1P47992 114 aa16.36■□□□□ 0.21
SMURF1-201ENST00000361125 SHANK1Q9Y566 2161 aa16.36■□□□□ 0.21
SMURF1-201ENST00000361125 TEX22C9J3V5 150 aa16.36■□□□□ 0.21
SMURF1-201ENST00000361125 E7EUB6 86 aa16.36■□□□□ 0.21
SMURF1-201ENST00000361125 DAZAP2Q15038 168 aaPredicted RBP16.36■□□□□ 0.21
SMURF1-201ENST00000361125 LINC00173Q6ZV60 143 aa16.36■□□□□ 0.21
SMURF1-201ENST00000361125 RPL39LQ96EH5 51 aaKnown RBP16.36■□□□□ 0.21
SMURF1-201ENST00000361125 F8W1H4 67 aa16.35■□□□□ 0.21
SMURF1-201ENST00000361125 CRIP3Q6Q6R5 217 aa16.35■□□□□ 0.21
SMURF1-201ENST00000361125 ZMAT4Q9H898 229 aa16.35■□□□□ 0.21
SMURF1-201ENST00000361125 Q6ZPA2 131 aa16.35■□□□□ 0.21
SMURF1-201ENST00000361125 C16orf54Q6UWD8 224 aa16.35■□□□□ 0.21
SMURF1-201ENST00000361125 FAM167A-AS1Q96KT0 104 aa16.35■□□□□ 0.21
SMURF1-201ENST00000361125 J3QQQ9 107 aa16.34■□□□□ 0.21
SMURF1-201ENST00000361125 ABCA4P78363 2273 aa16.34■□□□□ 0.21
SMURF1-201ENST00000361125 NCKAP5O14513 1909 aa16.34■□□□□ 0.21
SMURF1-201ENST00000361125 C9orf66Q5T8R8 295 aa16.34■□□□□ 0.21
SMURF1-201ENST00000361125 GTF3C1Q12789 2109 aa16.33■□□□□ 0.21
SMURF1-201ENST00000361125 CADP27708 2225 aa16.33■□□□□ 0.2
SMURF1-201ENST00000361125 ETDBQ3ZM63 59 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms