RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 Q8NAQ8 132 aa7.41□□□□□ -1.22
TPM3-207ENST00000341372 FAM167A-AS1Q96KT0 104 aa7.41□□□□□ -1.22
TPM3-207ENST00000341372 EIF5A2Q9GZV4 153 aaKnown RBP7.41□□□□□ -1.22
TPM3-207ENST00000341372 OR51M1Q9H341 326 aa7.41□□□□□ -1.22
TPM3-207ENST00000341372 HLA-DMBP28068 263 aa7.4□□□□□ -1.22
TPM3-207ENST00000341372 UBE2G2P60604 165 aa7.4□□□□□ -1.22
TPM3-207ENST00000341372 PSG9Q00887 426 aa7.4□□□□□ -1.22
TPM3-207ENST00000341372 FAM78BQ5VT40 261 aa7.4□□□□□ -1.22
TPM3-207ENST00000341372 RXFP4Q8TDU9 374 aa7.4□□□□□ -1.22
TPM3-207ENST00000341372 SLC25A2Q9BXI2 301 aa7.4□□□□□ -1.22
TPM3-207ENST00000341372 ACTR3CQ9C0K3 210 aaPredicted RBP7.4□□□□□ -1.22
TPM3-207ENST00000341372 ZNF586Q9NXT0 402 aa7.4□□□□□ -1.22
TPM3-207ENST00000341372 GNG13Q9P2W3 67 aa7.4□□□□□ -1.22
TPM3-207ENST00000341372 CDK2AP2O75956 126 aa7.4□□□□□ -1.23
TPM3-207ENST00000341372 DUSP14O95147 198 aaKnown RBP7.4□□□□□ -1.23
TPM3-207ENST00000341372 HIST1H1EP10412 219 aaKnown RBP7.4□□□□□ -1.23
TPM3-207ENST00000341372 CDC34P49427 236 aaPredicted RBP7.4□□□□□ -1.23
TPM3-207ENST00000341372 XGP55808 180 aa7.4□□□□□ -1.23
TPM3-207ENST00000341372 PDE6HQ13956 83 aa7.4□□□□□ -1.23
TPM3-207ENST00000341372 ZNF705AQ6ZN79 300 aaPredicted RBP7.4□□□□□ -1.23
TPM3-207ENST00000341372 ZNF738Q8NE65 137 aa7.4□□□□□ -1.23
TPM3-207ENST00000341372 SLC35B3Q9H1N7 401 aa7.4□□□□□ -1.23
TPM3-207ENST00000341372 FUT9Q9Y231 359 aa7.4□□□□□ -1.23
TPM3-207ENST00000341372 TNFRSF18Q9Y5U5 241 aa7.4□□□□□ -1.23
TPM3-207ENST00000341372 TRBV19A0A075B6N1 114 aa7.39□□□□□ -1.23
TPM3-207ENST00000341372 ZNF705FA8MVS1 300 aaPredicted RBP7.39□□□□□ -1.23
TPM3-207ENST00000341372 ZNF705DP0CH99 300 aaPredicted RBP7.39□□□□□ -1.23
TPM3-207ENST00000341372 ZNF705BP0CI00 300 aaPredicted RBP7.39□□□□□ -1.23
TPM3-207ENST00000341372 BCL2P10415 239 aa7.39□□□□□ -1.23
TPM3-207ENST00000341372 MIFP14174 115 aa7.39□□□□□ -1.23
TPM3-207ENST00000341372 PMCHP20382 165 aa7.39□□□□□ -1.23
TPM3-207ENST00000341372 KHDC3LQ587J8 217 aa7.39□□□□□ -1.23
TPM3-207ENST00000341372 MIR17HGQ75NE6 70 aa7.39□□□□□ -1.23
TPM3-207ENST00000341372 OR4B1Q8NGF8 309 aa7.39□□□□□ -1.23
TPM3-207ENST00000341372 OR8A1Q8NGG7 326 aa7.39□□□□□ -1.23
TPM3-207ENST00000341372 SMDT1Q9H4I9 107 aa7.39□□□□□ -1.23
TPM3-207ENST00000341372 IGLV9-49A0A0B4J1Y8 123 aa7.39□□□□□ -1.23
TPM3-207ENST00000341372 IGKV3-20P01619 116 aa7.39□□□□□ -1.23
TPM3-207ENST00000341372 RPUSD4Q96CM3 377 aaKnown RBP7.39□□□□□ -1.23
TPM3-207ENST00000341372 XCL2Q9UBD3 114 aa7.39□□□□□ -1.23
TPM3-207ENST00000341372 AMBPP02760 352 aa7.38□□□□□ -1.23
TPM3-207ENST00000341372 SNRPCP09234 159 aaKnown RBP7.38□□□□□ -1.23
TPM3-207ENST00000341372 PYYP10082 97 aa7.38□□□□□ -1.23
TPM3-207ENST00000341372 BTN1A1Q13410 526 aa7.38□□□□□ -1.23
TPM3-207ENST00000341372 CYB561D1Q8N8Q1 229 aa7.38□□□□□ -1.23
TPM3-207ENST00000341372 TENM2Q9NT68 2774 aa7.37□□□□□ -1.23
TPM3-207ENST00000341372 RBMY1A1P0DJD3 496 aaKnown RBP7.37□□□□□ -1.23
TPM3-207ENST00000341372 RBMY1CP0DJD4 496 aa7.37□□□□□ -1.23
TPM3-207ENST00000341372 ARL14EPLP0DKL9 152 aa7.37□□□□□ -1.23
TPM3-207ENST00000341372 RBMY1FQ15415 496 aaKnown RBP7.37□□□□□ -1.23
TPM3-207ENST00000341372 VAMP3Q15836 100 aa7.37□□□□□ -1.23
TPM3-207ENST00000341372 ZFAND6Q6FIF0 208 aa7.37□□□□□ -1.23
TPM3-207ENST00000341372 FXYD5Q96DB9 178 aa7.37□□□□□ -1.23
TPM3-207ENST00000341372 NKX6-2Q9C056 277 aaPredicted RBP7.37□□□□□ -1.23
TPM3-207ENST00000341372 A0A1B0GW15 77 aa7.37□□□□□ -1.23
TPM3-207ENST00000341372 CRXO43186 299 aaPredicted RBP7.37□□□□□ -1.23
TPM3-207ENST00000341372 FXYD7P58549 80 aa7.37□□□□□ -1.23
TPM3-207ENST00000341372 RHOBP62745 196 aa7.37□□□□□ -1.23
TPM3-207ENST00000341372 HIST1H1AQ02539 215 aaPredicted RBP7.37□□□□□ -1.23
TPM3-207ENST00000341372 C1orf158Q8N1D5 194 aa7.37□□□□□ -1.23
TPM3-207ENST00000341372 SVBPQ8N300 66 aa7.37□□□□□ -1.23
TPM3-207ENST00000341372 IGF2BP2-AS1Q96M15 143 aa7.37□□□□□ -1.23
TPM3-207ENST00000341372 VAX2Q9UIW0 290 aa7.37□□□□□ -1.23
TPM3-207ENST00000341372 PRELID1Q9Y255 219 aa7.37□□□□□ -1.23
TPM3-207ENST00000341372 SACSQ9NZJ4 4579 aa7.36□□□□□ -1.23
TPM3-207ENST00000341372 DNAH1Q9P2D7 4330 aa7.36□□□□□ -1.23
TPM3-207ENST00000341372 ALMS1Q8TCU4 4167 aa7.36□□□□□ -1.23
TPM3-207ENST00000341372 IGLV5-52A0A0A0MRZ9 124 aa7.36□□□□□ -1.23
TPM3-207ENST00000341372 SMIM9A6NGZ8 99 aa7.36□□□□□ -1.23
TPM3-207ENST00000341372 PRAC2D3DTV9 90 aa7.36□□□□□ -1.23
TPM3-207ENST00000341372 ODF3Q96PU9 254 aa7.36□□□□□ -1.23
TPM3-207ENST00000341372 NIPSNAP3BQ9BS92 247 aa7.36□□□□□ -1.23
TPM3-207ENST00000341372 PAXXQ9BUH6 204 aa7.36□□□□□ -1.23
TPM3-207ENST00000341372 MAP1LC3CQ9BXW4 147 aa7.36□□□□□ -1.23
TPM3-207ENST00000341372 NBEAP1P0C6P0 100 aa7.35□□□□□ -1.23
TPM3-207ENST00000341372 GCHFRP30047 84 aa7.35□□□□□ -1.23
TPM3-207ENST00000341372 TAS2R45P59539 299 aa7.35□□□□□ -1.23
TPM3-207ENST00000341372 SPINK13Q1W4C9 94 aa7.35□□□□□ -1.23
TPM3-207ENST00000341372 LYSTQ99698 3801 aa7.35□□□□□ -1.23
TPM3-207ENST00000341372 GOLT1BQ9Y3E0 138 aa7.35□□□□□ -1.23
TPM3-207ENST00000341372 YTHDF2Q9Y5A9 579 aaKnown RBP7.35□□□□□ -1.23
TPM3-207ENST00000341372 PLECQ15149 4684 aaKnown RBP7.35□□□□□ -1.23
TPM3-207ENST00000341372 M0R2Z0 102 aa7.35□□□□□ -1.23
TPM3-207ENST00000341372 M0R3E3 92 aa7.35□□□□□ -1.23
TPM3-207ENST00000341372 CXorf1O96002 111 aa7.35□□□□□ -1.23
TPM3-207ENST00000341372 ATP5G3P48201 142 aa7.35□□□□□ -1.23
TPM3-207ENST00000341372 MEF2BQ02080 365 aaPredicted RBP7.35□□□□□ -1.23
TPM3-207ENST00000341372 C2orf48Q96LS8 159 aa7.35□□□□□ -1.23
TPM3-207ENST00000341372 NUPR2A6NF83 97 aa7.34□□□□□ -1.23
TPM3-207ENST00000341372 DEFB4AO15263 64 aa7.34□□□□□ -1.23
TPM3-207ENST00000341372 SNAI2O43623 268 aa7.34□□□□□ -1.23
TPM3-207ENST00000341372 OR7C2O60412 319 aa7.34□□□□□ -1.23
TPM3-207ENST00000341372 INSP01308 110 aa7.34□□□□□ -1.23
TPM3-207ENST00000341372 OR10J4P0C629 311 aa7.34□□□□□ -1.23
TPM3-207ENST00000341372 AKR1C3P42330 323 aa7.34□□□□□ -1.23
TPM3-207ENST00000341372 UBE2L3P68036 154 aaKnown RBP7.34□□□□□ -1.23
TPM3-207ENST00000341372 LYPD1Q8N2G4 141 aa7.34□□□□□ -1.23
TPM3-207ENST00000341372 OR10J6PQ8NGY7 276 aa7.34□□□□□ -1.23
TPM3-207ENST00000341372 C11orf45Q8TAV5 145 aa7.34□□□□□ -1.23
TPM3-207ENST00000341372 BLNKQ8WV28 456 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms