RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 Q9H3A6 140 aa4.33□□□□□ -1.72
CSDE1-202ENST00000339438 PKHD1P08F94 4074 aa4.33□□□□□ -1.72
CSDE1-202ENST00000339438 RYR2Q92736 4967 aa4.33□□□□□ -1.72
CSDE1-202ENST00000339438 TIMM8AO60220 97 aaPredicted RBP4.33□□□□□ -1.72
CSDE1-202ENST00000339438 CECR9P0C854 216 aa4.33□□□□□ -1.72
CSDE1-202ENST00000339438 SAA2P0DJI9 122 aaPredicted RBP4.33□□□□□ -1.72
CSDE1-202ENST00000339438 COX6B1P14854 86 aa4.33□□□□□ -1.72
CSDE1-202ENST00000339438 TNFRSF1AP19438 455 aa4.33□□□□□ -1.72
CSDE1-202ENST00000339438 ATP5IP56385 69 aaPredicted RBP4.33□□□□□ -1.72
CSDE1-202ENST00000339438 ORMDL3Q8N138 153 aa4.33□□□□□ -1.72
CSDE1-202ENST00000339438 S1PR3Q99500 378 aa4.33□□□□□ -1.72
CSDE1-202ENST00000339438 VKORC1Q9BQB6 163 aa4.33□□□□□ -1.72
CSDE1-202ENST00000339438 SPXQ9BT56 116 aa4.33□□□□□ -1.72
CSDE1-202ENST00000339438 RTL8AQ9BWD3 113 aa4.33□□□□□ -1.72
CSDE1-202ENST00000339438 DSCAMO60469 2012 aa4.33□□□□□ -1.72
CSDE1-202ENST00000339438 VWFP04275 2813 aa4.33□□□□□ -1.72
CSDE1-202ENST00000339438 ALMS1Q8TCU4 4167 aa4.33□□□□□ -1.72
CSDE1-202ENST00000339438 PKHD1L1Q86WI1 4243 aa4.33□□□□□ -1.72
CSDE1-202ENST00000339438 TRAV40A0A0B4J280 105 aa4.33□□□□□ -1.72
CSDE1-202ENST00000339438 MYMXA0A1B0GTQ4 84 aa4.33□□□□□ -1.72
CSDE1-202ENST00000339438 GNLYP22749 145 aa4.33□□□□□ -1.72
CSDE1-202ENST00000339438 KIR2DS2P43631 304 aa4.33□□□□□ -1.72
CSDE1-202ENST00000339438 ERVK-16P61578 105 aa4.33□□□□□ -1.72
CSDE1-202ENST00000339438 RIGQ13278 110 aa4.33□□□□□ -1.72
CSDE1-202ENST00000339438 SRSF12Q8WXF0 261 aaKnown RBP4.33□□□□□ -1.72
CSDE1-202ENST00000339438 CCDC168Q8NDH2 2452 aa4.33□□□□□ -1.72
CSDE1-202ENST00000339438 SPRY3O43610 288 aa4.32□□□□□ -1.72
CSDE1-202ENST00000339438 IGHV3-13P01766 116 aa4.32□□□□□ -1.72
CSDE1-202ENST00000339438 FCER1GP30273 86 aa4.32□□□□□ -1.72
CSDE1-202ENST00000339438 CRIP2P52943 208 aaPredicted RBP4.32□□□□□ -1.72
CSDE1-202ENST00000339438 C17orf58Q2M2W7 97 aa4.32□□□□□ -1.72
CSDE1-202ENST00000339438 ZNF672Q499Z4 452 aaPredicted RBP4.32□□□□□ -1.72
CSDE1-202ENST00000339438 DEFB108BQ8NET1 73 aa4.32□□□□□ -1.72
CSDE1-202ENST00000339438 FBN3Q75N90 2809 aa4.32□□□□□ -1.72
CSDE1-202ENST00000339438 HOXA3O43365 443 aaPredicted RBP4.32□□□□□ -1.72
CSDE1-202ENST00000339438 COX7A2P2O60397 106 aa4.32□□□□□ -1.72
CSDE1-202ENST00000339438 LGALS1P09382 135 aaKnown RBP4.32□□□□□ -1.72
CSDE1-202ENST00000339438 WT1-ASQ06250 92 aa4.32□□□□□ -1.72
CSDE1-202ENST00000339438 COX8CQ7Z4L0 72 aa4.32□□□□□ -1.72
CSDE1-202ENST00000339438 MAP1LC3AQ9H492 121 aa4.32□□□□□ -1.72
CSDE1-202ENST00000339438 RAB9BQ9NP90 201 aa4.32□□□□□ -1.72
CSDE1-202ENST00000339438 MRPL35Q9NZE8 188 aaKnown RBP4.32□□□□□ -1.72
CSDE1-202ENST00000339438 LINC01549A6NIU2 74 aa4.32□□□□□ -1.72
CSDE1-202ENST00000339438 DPM2O94777 84 aa4.32□□□□□ -1.72
CSDE1-202ENST00000339438 ASIPP42127 132 aa4.32□□□□□ -1.72
CSDE1-202ENST00000339438 LYZL1Q6UWQ5 148 aa4.32□□□□□ -1.72
CSDE1-202ENST00000339438 OR1L4Q8NGR5 311 aa4.32□□□□□ -1.72
CSDE1-202ENST00000339438 IQCF6A8MYZ5 107 aa4.31□□□□□ -1.72
CSDE1-202ENST00000339438 H3BTX0 84 aa4.31□□□□□ -1.72
CSDE1-202ENST00000339438 FAM201AQ5SY85 155 aa4.31□□□□□ -1.72
CSDE1-202ENST00000339438 TMEM75Q8N9X5 138 aa4.31□□□□□ -1.72
CSDE1-202ENST00000339438 RASL11BQ9BPW5 248 aa4.31□□□□□ -1.72
CSDE1-202ENST00000339438 DOPEY2Q9Y3R5 2298 aa4.31□□□□□ -1.72
CSDE1-202ENST00000339438 IGKV1D-17A0A075B6S4 117 aa4.31□□□□□ -1.72
CSDE1-202ENST00000339438 ARL3P36405 182 aa4.31□□□□□ -1.72
CSDE1-202ENST00000339438 PSMB2P49721 201 aa4.31□□□□□ -1.72
CSDE1-202ENST00000339438 GAGE2BQ13066 116 aa4.31□□□□□ -1.72
CSDE1-202ENST00000339438 GAGE2EQ4V326 116 aa4.31□□□□□ -1.72
CSDE1-202ENST00000339438 C5orf47Q569G3 176 aa4.31□□□□□ -1.72
CSDE1-202ENST00000339438 EXOC3-AS1Q8N2X6 119 aa4.31□□□□□ -1.72
CSDE1-202ENST00000339438 KLF14Q8TD94 323 aaPredicted RBP4.31□□□□□ -1.72
CSDE1-202ENST00000339438 NPIPB3Q92617 1050 aa4.31□□□□□ -1.72
CSDE1-202ENST00000339438 LEAP2Q969E1 77 aa4.31□□□□□ -1.72
CSDE1-202ENST00000339438 HIST1H4GQ99525 98 aa4.31□□□□□ -1.72
CSDE1-202ENST00000339438 CNFNQ9BYD5 112 aa4.31□□□□□ -1.72
CSDE1-202ENST00000339438 GAGE2DQ9UEU5 116 aa4.31□□□□□ -1.72
CSDE1-202ENST00000339438 IGHV1-18A0A0C4DH31 117 aa4.31□□□□□ -1.72
CSDE1-202ENST00000339438 TMEM262E9PQX1 116 aa4.31□□□□□ -1.72
CSDE1-202ENST00000339438 FSHBP01225 129 aa4.31□□□□□ -1.72
CSDE1-202ENST00000339438 IGHV3-48P01763 117 aa4.31□□□□□ -1.72
CSDE1-202ENST00000339438 LEPP41159 167 aa4.31□□□□□ -1.72
CSDE1-202ENST00000339438 MEIG1Q5JSS6 88 aa4.31□□□□□ -1.72
CSDE1-202ENST00000339438 PPP1R27Q86WC6 154 aa4.31□□□□□ -1.72
CSDE1-202ENST00000339438 NDUFA11Q86Y39 141 aa4.31□□□□□ -1.72
CSDE1-202ENST00000339438 CALYQ9NYX4 217 aa4.31□□□□□ -1.72
CSDE1-202ENST00000339438 TRAV25A0A0B4J276 109 aa4.3□□□□□ -1.72
CSDE1-202ENST00000339438 LOC107984640A0A0U1RRK4 108 aa4.3□□□□□ -1.72
CSDE1-202ENST00000339438 MRPS12O15235 138 aaKnown RBP4.3□□□□□ -1.72
CSDE1-202ENST00000339438 IGLC6P0CF74 106 aa4.3□□□□□ -1.72
CSDE1-202ENST00000339438 CCL8P80075 99 aa4.3□□□□□ -1.72
CSDE1-202ENST00000339438 PRNTQ86SH4 94 aa4.3□□□□□ -1.72
CSDE1-202ENST00000339438 POM121L12Q8N7R1 296 aa4.3□□□□□ -1.72
CSDE1-202ENST00000339438 PLEKHB2Q96CS7 222 aa4.3□□□□□ -1.72
CSDE1-202ENST00000339438 DAZAP1Q96EP5 407 aaKnown RBP4.3□□□□□ -1.72
CSDE1-202ENST00000339438 DNAJC30Q96LL9 226 aa4.3□□□□□ -1.72
CSDE1-202ENST00000339438 C8orf49Q96NF6 230 aa4.3□□□□□ -1.72
CSDE1-202ENST00000339438 TMEM126AQ9H061 195 aa4.3□□□□□ -1.72
CSDE1-202ENST00000339438 ARFGEF3Q5TH69 2177 aa4.3□□□□□ -1.72
CSDE1-202ENST00000339438 TLN2Q9Y4G6 2542 aa4.3□□□□□ -1.72
CSDE1-202ENST00000339438 M0R2P5 195 aa4.3□□□□□ -1.72
CSDE1-202ENST00000339438 LINC00694P0DN24 101 aa4.3□□□□□ -1.72
CSDE1-202ENST00000339438 OTORQ9NRC9 128 aa4.3□□□□□ -1.72
CSDE1-202ENST00000339438 C21orf62Q9NYP8 219 aa4.3□□□□□ -1.72
CSDE1-202ENST00000339438 CSPG4Q6UVK1 2322 aa4.3□□□□□ -1.72
CSDE1-202ENST00000339438 IGHV3OR15-7A0A075B7D8 119 aa4.3□□□□□ -1.72
CSDE1-202ENST00000339438 ELANEP08246 267 aa4.3□□□□□ -1.72
CSDE1-202ENST00000339438 SAA1P0DJI8 122 aaPredicted RBP4.3□□□□□ -1.72
CSDE1-202ENST00000339438 MYOZ3Q8TDC0 251 aa4.3□□□□□ -1.72
CSDE1-202ENST00000339438 FLYWCH2Q96CP2 140 aaKnown RBP4.3□□□□□ -1.72
CSDE1-202ENST00000339438 C17orf77Q96MU5 243 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms